RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 M0QYV0 167 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 SUPT3HO75486 399 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 ASNSP08243 561 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 DAB2P98082 770 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 GRM1Q13255 1194 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 NAB2Q15742 525 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 RHPN2Q8IUC4 686 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 TBC1D10CQ8IV04 446 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 RAB42Q8N4Z0 105 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 CCDC90BQ9GZT6 254 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 ISCUQ9H1K1 167 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 ADNPQ9H2P0 1102 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 ZNF556Q9HAH1 456 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 POTEMA6NI47 508 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 GSNP06396 782 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 MYL2P10916 166 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 STAT3P40763 770 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 FNTAP49354 379 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 DYNLL1P63167 89 aaKnown RBP8.05□□□□□ -1.12
SF3B3-201ENST00000302516 RUNX1T1Q06455 604 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 PTK2BQ14289 1009 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.05□□□□□ -1.121e-8■■■■■ 50.1
SF3B3-201ENST00000302516 CALML6Q8TD86 181 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 ORAI2Q96SN7 254 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 SIKE1Q9BRV8 207 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 DDX28Q9NUL7 540 aaKnown RBP8.05□□□□□ -1.12
SF3B3-201ENST00000302516 MYO5BQ9ULV0 1848 aa8.05□□□□□ -1.12
SF3B3-201ENST00000302516 TRPC5OSA6NMA1 111 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 P4HA2O15460 535 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 PEX3P56589 373 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 RNF219Q5W0B1 726 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 C7orf31Q8N865 590 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 ZNF560Q96MR9 790 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 VPS33BQ9H267 617 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 KCNF1Q9H3M0 494 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 SP110Q9HB58 689 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 NPHS2Q9NP85 383 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 LRRIQ3A6PVS8 624 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 PSTPIP1O43586 416 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 USP17L8P0C7I0 530 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 SESN1Q9Y6P5 492 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 ESYT3A0FGR9 886 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 USP17L3A6NCW0 530 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 USP17L4A6NCW7 530 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 PRR23D1E9PI22 279 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 SRP72O76094 671 aaKnown RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 PRR23D2P0DMB1 279 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 HLA-DPA1P20036 260 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 IREB2P48200 963 aaKnown RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 DPYDQ12882 1025 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 USP17L1Q7RTZ2 530 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 METTL16Q86W50 562 aaKnown RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 DDIASQ8IXT1 998 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 PCDHB8Q9UN66 801 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 VPS9D1Q9Y2B5 631 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 FAM95CA0A1B0GW59 222 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 MAGEA13PA6NCF6 341 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 PJA2O43164 708 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 NCK2O43639 380 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 ATP5BP06576 529 aaKnown RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 ENO1P06733 434 aaKnown RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 RECQLP46063 649 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 GCLMP48507 274 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 GRAPQ13588 217 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 UBE2SQ16763 222 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 RABGAP1LQ5R372 815 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 GRAPLQ8TC17 118 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 RBM15Q96T37 977 aaKnown RBP eCLIP8.04□□□□□ -1.127e-7■■■■□ 19.3
SF3B3-201ENST00000302516 MYH7P12883 1935 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 PSMC5P62195 406 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 CDC42EP1Q00587 391 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 MXD4Q14582 209 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 TXNRD1Q16881 649 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 ZC3H12BQ5HYM0 836 aaKnown RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 DPY19L2Q6NUT2 758 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 CATSPER3Q86XQ3 398 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 ELMOD1Q8N336 334 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 CDC26Q8NHZ8 85 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 HPS3Q969F9 1004 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 CYP4F11Q9HBI6 524 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 SMARCAL1Q9NZC9 954 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 MAD2L2Q9UI95 211 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 G3BP2Q9UN86 482 aaKnown RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 SUGT1Q9Y2Z0 365 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 SLC4A7Q9Y6M7 1214 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 PRKAB2O43741 272 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 ADCY3O60266 1144 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 PTPN21Q16825 1174 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 CENPPQ6IPU0 288 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 KCNV1Q6PIU1 500 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 CCNI2Q6ZMN8 369 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 COL23A1Q86Y22 540 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 NSL1Q96IY1 281 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 CNBD2Q96M20 576 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 NDEL1Q9GZM8 345 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 PCDHA6Q9UN73 950 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 PCDHA8Q9Y5H6 950 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 NPHP4O75161 1426 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 NCOA3Q9Y6Q9 1424 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms