RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 AKT3Q9Y243 479 aa24.05■■□□□ 1.44
SMAD1-201ENST00000302085 SGPL1O95470 568 aa24.04■■□□□ 1.44
SMAD1-201ENST00000302085 VTNP04004 478 aa24.04■■□□□ 1.44
SMAD1-201ENST00000302085 PHKA2P46019 1235 aa24.04■■□□□ 1.44
SMAD1-201ENST00000302085 IFNLR1Q8IU57 520 aaPredicted RBP24.04■■□□□ 1.44
SMAD1-201ENST00000302085 LENG1Q96BZ8 264 aaPredicted RBP24.04■■□□□ 1.44
SMAD1-201ENST00000302085 PPP1R16BQ96T49 567 aa24.04■■□□□ 1.44
SMAD1-201ENST00000302085 CPSF3Q9UKF6 684 aaKnown RBP24.04■■□□□ 1.44
SMAD1-201ENST00000302085 INTUQ9ULD6 942 aa24.04■■□□□ 1.44
SMAD1-201ENST00000302085 ATP8B3O60423 1300 aa24.04■■□□□ 1.44
SMAD1-201ENST00000302085 CYP26A1O43174 497 aa24.03■■□□□ 1.44
SMAD1-201ENST00000302085 TMOD1P28289 359 aa24.03■■□□□ 1.44
SMAD1-201ENST00000302085 IRX5P78411 483 aaPredicted RBP24.03■■□□□ 1.44
SMAD1-201ENST00000302085 BIRC3Q13489 604 aa24.03■■□□□ 1.44
SMAD1-201ENST00000302085 PALB2Q86YC2 1186 aa24.03■■□□□ 1.44
SMAD1-201ENST00000302085 TNFSF13BQ9Y275 285 aa24.03■■□□□ 1.44
SMAD1-201ENST00000302085 CSDE1O75534 798 aaKnown RBP24.03■■□□□ 1.44
SMAD1-201ENST00000302085 GALCP54803 685 aa24.03■■□□□ 1.44
SMAD1-201ENST00000302085 FAM187BQ17R55 369 aa24.03■■□□□ 1.44
SMAD1-201ENST00000302085 CDR2LQ86X02 465 aaPredicted RBP24.03■■□□□ 1.44
SMAD1-201ENST00000302085 DHX38Q92620 1227 aaKnown RBP24.03■■□□□ 1.44
SMAD1-201ENST00000302085 KAT2BQ92831 832 aa24.03■■□□□ 1.44
SMAD1-201ENST00000302085 APBA2Q99767 749 aa24.03■■□□□ 1.44
SMAD1-201ENST00000302085 SETD4Q9NVD3 440 aa24.03■■□□□ 1.44
SMAD1-201ENST00000302085 PRMT7Q9NVM4 692 aaPredicted RBP24.03■■□□□ 1.44
SMAD1-201ENST00000302085 NOCTQ9UK39 431 aaKnown RBP24.03■■□□□ 1.44
SMAD1-201ENST00000302085 TNPO2O14787 897 aaKnown RBP24.02■■□□□ 1.44
SMAD1-201ENST00000302085 PALMO75781 387 aa24.02■■□□□ 1.44
SMAD1-201ENST00000302085 CHRNB2P17787 502 aa24.02■■□□□ 1.44
SMAD1-201ENST00000302085 CHMP4BP1P59074 171 aa24.02■■□□□ 1.44
SMAD1-201ENST00000302085 GCNT1Q02742 428 aa24.02■■□□□ 1.44
SMAD1-201ENST00000302085 GRM1Q13255 1194 aa24.02■■□□□ 1.44
SMAD1-201ENST00000302085 AMHR2Q16671 573 aa24.02■■□□□ 1.44
SMAD1-201ENST00000302085 TLK2Q86UE8 772 aa24.02■■□□□ 1.44
SMAD1-201ENST00000302085 KIAA0319LQ8IZA0 1049 aa24.02■■□□□ 1.44
SMAD1-201ENST00000302085 TAS2R14Q9NYV8 317 aa24.02■■□□□ 1.44
SMAD1-201ENST00000302085 SNX12Q9UMY4 172 aa24.02■■□□□ 1.44
SMAD1-201ENST00000302085 PCDHGC5Q9Y5F6 944 aa24.02■■□□□ 1.44
SMAD1-201ENST00000302085 TMCO5BA8MYB1 307 aa24.02■■□□□ 1.43
SMAD1-201ENST00000302085 PIK3CAP42336 1068 aa24.02■■□□□ 1.43
SMAD1-201ENST00000302085 WDR44Q5JSH3 913 aa24.02■■□□□ 1.43
SMAD1-201ENST00000302085 SCARA3Q6AZY7 606 aa24.02■■□□□ 1.43
SMAD1-201ENST00000302085 NOP9Q86U38 636 aaKnown RBP24.02■■□□□ 1.43
SMAD1-201ENST00000302085 SLC47A2Q86VL8 602 aa24.02■■□□□ 1.43
SMAD1-201ENST00000302085 RPUSD2Q8IZ73 545 aaKnown RBP24.02■■□□□ 1.43
SMAD1-201ENST00000302085 SOCS4Q8WXH5 440 aa24.02■■□□□ 1.43
SMAD1-201ENST00000302085 ACP6Q9NPH0 428 aa24.02■■□□□ 1.43
SMAD1-201ENST00000302085 NCK2O43639 380 aa24.01■■□□□ 1.43
SMAD1-201ENST00000302085 ZNF568Q3ZCX4 644 aa24.01■■□□□ 1.43
SMAD1-201ENST00000302085 ENOSF1Q7L5Y1 443 aa24.01■■□□□ 1.43
SMAD1-201ENST00000302085 THNSL1Q8IYQ7 743 aa24.01■■□□□ 1.43
SMAD1-201ENST00000302085 EPS8L1Q8TE68 723 aa24.01■■□□□ 1.43
SMAD1-201ENST00000302085 TLR10Q9BXR5 811 aa24.01■■□□□ 1.43
SMAD1-201ENST00000302085 C1orf112Q9NSG2 853 aa24.01■■□□□ 1.43
SMAD1-201ENST00000302085 SEPT11Q9NVA2 429 aaKnown RBP24.01■■□□□ 1.43
SMAD1-201ENST00000302085 ZNF185O15231 689 aa24■■□□□ 1.43
SMAD1-201ENST00000302085 CA12O43570 354 aa24■■□□□ 1.43
SMAD1-201ENST00000302085 PRLRP16471 622 aa24■■□□□ 1.43
SMAD1-201ENST00000302085 TMEM132AQ24JP5 1023 aa24■■□□□ 1.43
SMAD1-201ENST00000302085 TEX35Q5T0J7 233 aa24■■□□□ 1.43
SMAD1-201ENST00000302085 SPOPLQ6IQ16 392 aa24■■□□□ 1.43
SMAD1-201ENST00000302085 GOLGA1Q92805 767 aa24■■□□□ 1.43
SMAD1-201ENST00000302085 PCDHB18PQ96TA0 734 aa24■■□□□ 1.43
SMAD1-201ENST00000302085 CDT1Q9H211 546 aa24■■□□□ 1.43
SMAD1-201ENST00000302085 APOBEC3GQ9HC16 384 aaKnown RBP24■■□□□ 1.43
SMAD1-201ENST00000302085 GRID2IPA4D2P6 1211 aa24■■□□□ 1.43
SMAD1-201ENST00000302085 RRN3P2A6NIE6 340 aa24■■□□□ 1.43
SMAD1-201ENST00000302085 F2P00734 622 aa24■■□□□ 1.43
SMAD1-201ENST00000302085 WDR49Q8IV35 697 aa24■■□□□ 1.43
SMAD1-201ENST00000302085 PPP1R13LQ8WUF5 828 aa24■■□□□ 1.43
SMAD1-201ENST00000302085 LMBR1Q8WVP7 490 aa24■■□□□ 1.43
SMAD1-201ENST00000302085 FAM212AQ96EL1 285 aa24■■□□□ 1.43
SMAD1-201ENST00000302085 FAM81BQ96LP2 452 aa24■■□□□ 1.43
SMAD1-201ENST00000302085 ARID3AQ99856 593 aa24■■□□□ 1.43
SMAD1-201ENST00000302085 A0A0A6YYK5 440 aaPredicted RBP23.99■■□□□ 1.43
SMAD1-201ENST00000302085 GPR25O00155 361 aa23.99■■□□□ 1.43
SMAD1-201ENST00000302085 SMIM10L2AP0DMW4 78 aa23.99■■□□□ 1.43
SMAD1-201ENST00000302085 SMIM10L2BP0DMW5 78 aa23.99■■□□□ 1.43
SMAD1-201ENST00000302085 AP3M2P53677 418 aa23.99■■□□□ 1.43
SMAD1-201ENST00000302085 CEP120Q8N960 986 aa23.99■■□□□ 1.43
SMAD1-201ENST00000302085 MAP7D2Q96T17 732 aa23.99■■□□□ 1.43
SMAD1-201ENST00000302085 EPC1Q9H2F5 836 aa23.99■■□□□ 1.43
SMAD1-201ENST00000302085 ZSWIM8A7E2V4 1837 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 CTAGE15A4D2H0 777 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 KIF3CO14782 793 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 PHACTR2O75167 634 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 TMEM253P0C7T8 217 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 CTAGE8P0CG41 777 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 CYP11B1P15538 503 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 NOP2P46087 812 aaKnown RBP23.98■■□□□ 1.43
SMAD1-201ENST00000302085 OSTNP61366 133 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 TAF3Q5VWG9 929 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 NFRKBQ6P4R8 1299 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 CTAGE6Q86UF2 777 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 CTAGE4Q8IX94 777 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 NLRP7Q8WX94 980 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 RABGGTAQ92696 567 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 CAPZA3Q96KX2 299 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 MMS19Q96T76 1030 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 KAT6AQ92794 2004 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms