RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 C1orf186Q6ZWK4 172 aa13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 FAM228AQ86W67 206 aa13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 ZSWIM2Q8NEG5 633 aa13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 CCHCR1Q8TD31 782 aa13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 MCUR1Q96AQ8 359 aa13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 ZNF317Q96PQ6 595 aaPredicted RBP13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 RBM15Q96T37 977 aaKnown RBP eCLIP13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 PAGR1Q9BTK6 254 aa13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 TUFT1Q9NNX1 390 aa13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 FBXO28Q9NVF7 368 aa13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 CCPG1Q9ULG6 757 aa13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 AGTPBP1Q9UPW5 1226 aa13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 MRPL11Q9Y3B7 192 aaKnown RBP13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 PLS3P13797 630 aa13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 FYB2Q5VWT5 728 aa13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 OTOP1Q7RTM1 612 aa13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 LMNTD2Q8IXW0 634 aa13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 VPS52Q8N1B4 723 aa13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 MAIP1Q8WWC4 291 aa13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 ATXN2LQ8WWM7 1075 aaKnown RBP13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 FAM163AQ96GL9 167 aaPredicted RBP13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 KLF6Q99612 283 aaPredicted RBP13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 MYH14Q7Z406 1995 aaKnown RBP13.41□□□□□ -0.26
TMEM200A-201ENST00000296978 A0A0G2JND7 137 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 C5orf60A6NFR6 353 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 Q4G0T1 1027 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 LACTB2Q53H82 288 aaPredicted RBP13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 RC3H1Q5TC82 1133 aaKnown RBP13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 NAIF1Q69YI7 327 aaPredicted RBP13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 RNF217Q8TC41 542 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 ACER1Q8TDN7 264 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 CHURC1Q8WUH1 139 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 CENPTQ96BT3 561 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 ACSF2Q96CM8 615 aaPredicted RBP13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 PCDHB18PQ96TA0 734 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 TXLNGQ9NUQ3 528 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 NYAP2Q9P242 653 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 SCAF8Q9UPN6 1271 aaKnown RBP13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 C15orf41Q9Y2V0 281 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 NCANO14594 1321 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 GAKO14976 1311 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 ITGB4P16144 1822 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 DOCK2Q92608 1830 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 DDX60Q8IY21 1712 aaKnown RBP13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 SGK1O00141 431 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 CDH16O75309 829 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 PAEPP09466 180 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 NCALDP61601 193 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 MXRA7P84157 204 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 P3H1Q32P28 736 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 ZNF394Q53GI3 561 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 SYCP2LQ5T4T6 812 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 PLA2G4FQ68DD2 849 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 ANKMY2Q8IV38 441 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 SCYL3Q8IZE3 742 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 GJD4Q96KN9 370 aaPredicted RBP13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 WDR18Q9BV38 432 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 IQCGQ9H095 443 aaKnown RBP13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 A1CFQ9NQ94 594 aaKnown RBP13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 EXOC7Q9UPT5 735 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 NAALADL1Q9UQQ1 740 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 GSTA1P08263 222 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 SPIRE1Q08AE8 756 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 EMC10Q5UCC4 262 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 CCDC89Q8N998 374 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 NUDCD1Q96RS6 583 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 FAM213AQ9BRX8 229 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 KMT5AQ9NQR1 393 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 CNOT7Q9UIV1 285 aaKnown RBP13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 USP20Q9Y2K6 914 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 PLCH1Q4KWH8 1693 aa13.4□□□□□ -0.26
TMEM200A-201ENST00000296978 MAPK13O15264 365 aa13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 MGRN1O60291 552 aa13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 GGPS1O95749 300 aa13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 TTC4O95801 387 aa13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 ITIH2P19823 946 aa13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 SARNPP82979 210 aaKnown RBP13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 RNASELQ05823 741 aaKnown RBP13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 RRP1BQ14684 758 aaKnown RBP13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 SNRNP35Q16560 246 aaKnown RBP13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 KRT39Q6A163 491 aa13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 ZBED8Q8IZ13 594 aa13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 EPS8L1Q8TE68 723 aa13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 ROPN1BQ9BZX4 212 aaPredicted RBP13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 ROPN1Q9HAT0 212 aaPredicted RBP13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 PCDHB4Q9Y5E5 795 aa13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 DENND3A2RUS2 1198 aa13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 APBA3O96018 575 aa13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 CYP11B1P15538 503 aa13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 RRM1P23921 792 aa13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 GPS1Q13098 491 aa13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 DMP1Q13316 513 aaPredicted RBP13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 CRYMQ14894 314 aa13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 GNPTABQ3T906 1256 aa13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 BTNL9Q6UXG8 535 aa13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 ATL2Q8NHH9 583 aa13.39□□□□□ -0.27
TMEM200A-201ENST00000296978 TAS1R2Q8TE23 839 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms