RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 TREML1Q86YW5 311 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 HSPH1Q92598 858 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 PAWRQ96IZ0 340 aaKnown RBP12.38□□□□□ -0.43
SNIP1-201ENST00000296215 ANAPC5Q9UJX4 755 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 AK9Q5TCS8 1911 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 ARHGEF37A1IGU5 675 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 RGS5O15539 181 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 TNFRSF21O75509 655 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 MT-ND3P03897 115 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 IFNA16P05015 189 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 RXRAP19793 462 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 TSC22D1Q15714 1073 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 BBS9Q3SYG4 887 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 ATG16L1Q676U5 607 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 KRT26Q7Z3Y9 468 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 ZBTB46Q86UZ6 589 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 SLC22A8Q8TCC7 542 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 ASB12Q8WXK4 309 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 PHKBQ93100 1093 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 KLHL32Q96NJ5 620 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 FAM32AQ9Y421 112 aaKnown RBP12.38□□□□□ -0.43
SNIP1-201ENST00000296215 ZSCAN5CA6NGD5 496 aaPredicted RBP12.37□□□□□ -0.43
SNIP1-201ENST00000296215 CYP27B1O15528 508 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 ADCY9O60503 1353 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 SIN3BO75182 1162 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 MARSP56192 900 aaKnown RBP12.37□□□□□ -0.43
SNIP1-201ENST00000296215 ZNF174Q15697 407 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 UHRF1BP1Q6BDS2 1440 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 AAGABQ6PD74 315 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 PLD3Q8IV08 490 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 ZSCAN5AQ9BUG6 496 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 HEY2Q9UBP5 337 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 TFR2Q9UP52 801 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 MTO1Q9Y2Z2 717 aaKnown RBP12.37□□□□□ -0.43
SNIP1-201ENST00000296215 PTPN23Q9H3S7 1636 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 EPRSP07814 1512 aaKnown RBP12.37□□□□□ -0.43
SNIP1-201ENST00000296215 NSD2O96028 1365 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 EXTL3O43909 919 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 ATF6P18850 670 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 DLG4P78352 724 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 PCSK7Q16549 785 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 TEDDM1Q5T9Z0 273 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 RNF207Q6ZRF8 634 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 FASTKD5Q7L8L6 764 aaKnown RBP12.37□□□□□ -0.43
SNIP1-201ENST00000296215 ANKRD13BQ86YJ7 626 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 CDC26Q8NHZ8 85 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 KIAA1683Q9H0B3 1180 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 CABP2Q9NPB3 220 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 HPS5Q9UPZ3 1129 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.37□□□□□ -0.43
SNIP1-201ENST00000296215 UBAP1LF5GYI3 381 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 TOM1O60784 492 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 GYPCP04921 128 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 ATF3P18847 181 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 TMPRSS15P98073 1019 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 KRT24Q2M2I5 525 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 KLHL35Q6PF15 583 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 ACAD11Q709F0 780 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 RMND5BQ96G75 393 aaPredicted RBP12.37□□□□□ -0.43
SNIP1-201ENST00000296215 MAGEB18Q96M61 343 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 KCNK16Q96T55 309 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 AIFM2Q9BRQ8 373 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 MKNK1Q9BUB5 465 aa12.37□□□□□ -0.43
SNIP1-201ENST00000296215 MSH6P52701 1360 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 PIK3CDO00329 1044 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 CCNKO75909 580 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 CLPPQ16740 277 aaPredicted RBP12.36□□□□□ -0.43
SNIP1-201ENST00000296215 SNAP47Q5SQN1 464 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 TSPAN14Q8NG11 270 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 VPS39Q96JC1 886 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 VPS35Q96QK1 796 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 WWP1Q9H0M0 922 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 RWDD2AQ9UIY3 292 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 UMODL1Q5DID0 1318 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 A0A087WZG4 1122 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 FAM47E-STBD1D6RA91 191 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 KRT19P08727 400 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 DBTP11182 482 aaKnown RBP12.36□□□□□ -0.43
SNIP1-201ENST00000296215 CDK17Q00537 523 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 CFAP70Q5T0N1 1121 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 C16orf62Q7Z3J2 963 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 KRT73Q86Y46 540 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 IQCKQ8N0W5 287 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 SLC25A41Q8N5S1 370 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.36□□□□□ -0.43
SNIP1-201ENST00000296215 HELQQ8TDG4 1101 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 ROPN1BQ9BZX4 212 aaPredicted RBP12.36□□□□□ -0.43
SNIP1-201ENST00000296215 PABPC3Q9H361 631 aaKnown RBP12.36□□□□□ -0.43
SNIP1-201ENST00000296215 ROPN1Q9HAT0 212 aaPredicted RBP12.36□□□□□ -0.43
SNIP1-201ENST00000296215 CCDC59Q9P031 241 aaKnown RBP12.36□□□□□ -0.43
SNIP1-201ENST00000296215 GPR75-ASB3A0A0A6YYF3 556 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 C15orf38-AP3S2A0A0A6YYH1 394 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 MAP3K13O43283 966 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 KRT37O76014 449 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 ITGALP20701 1170 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 ANXA13P27216 316 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 SOX11P35716 441 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 CLK3P49761 638 aaKnown RBP12.36□□□□□ -0.43
SNIP1-201ENST00000296215 GPC3P51654 580 aa12.36□□□□□ -0.43
SNIP1-201ENST00000296215 ZNF200P98182 395 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms