RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 DKC1O60832 514 aaKnown RBP eCLIP10.33□□□□□ -0.76
CNOT9-202ENST00000295701 URODP06132 367 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 JUNDP17535 347 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 ARF4P18085 180 aaPredicted RBP10.33□□□□□ -0.76
CNOT9-202ENST00000295701 RPL17P18621 184 aaKnown RBP10.33□□□□□ -0.76
CNOT9-202ENST00000295701 CAPSQ13938 189 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 ANGPT1Q15389 498 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 CPLX2Q6PUV4 134 aaKnown RBP10.33□□□□□ -0.76
CNOT9-202ENST00000295701 C15orf39Q6ZRI6 1047 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 RETREG3Q86VR2 466 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 DTWD2Q8NBA8 298 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 GSTCDQ8NEC7 633 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 ZNF707Q96C28 371 aaPredicted RBP10.33□□□□□ -0.76
CNOT9-202ENST00000295701 EIF2AK1Q9BQI3 630 aaKnown RBP10.33□□□□□ -0.76
CNOT9-202ENST00000295701 PAAF1Q9BRP4 392 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 TM6SF1Q9BZW5 370 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 CXCL16Q9H2A7 254 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 NXF3Q9H4D5 531 aaKnown RBP10.33□□□□□ -0.76
CNOT9-202ENST00000295701 ZSWIM4Q9H7M6 989 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 RXFP1Q9HBX9 757 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 WDR6Q9NNW5 1121 aaKnown RBP10.33□□□□□ -0.76
CNOT9-202ENST00000295701 TPCN1Q9ULQ1 816 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 CA14Q9ULX7 337 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 PCDHGC3Q9UN70 934 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 VWA8A3KMH1 1905 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 MYH15Q9Y2K3 1946 aa10.33□□□□□ -0.76
CNOT9-202ENST00000295701 COL4A3Q01955 1670 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 GAS2O43903 313 aaKnown RBP10.32□□□□□ -0.76
CNOT9-202ENST00000295701 ERLIN2O94905 339 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 NPTXRO95502 500 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 GLUD1P00367 558 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 ADH1AP07327 375 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 GCFC2P16383 781 aaKnown RBP10.32□□□□□ -0.76
CNOT9-202ENST00000295701 ARL2P36404 184 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 GLUD2P49448 558 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 DSG1Q02413 1049 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 MBTD1Q05BQ5 628 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 NOTUMQ6P988 496 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 MAEAQ7L5Y9 396 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 OTUD6AQ7L8S5 288 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 CCDC105Q8IYK2 499 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 ADSSL1Q8N142 457 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 SLC44A3Q8N4M1 653 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 NECAB1Q8N987 351 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 CMASQ8NFW8 434 aaPredicted RBP10.32□□□□□ -0.76
CNOT9-202ENST00000295701 TCP11Q8WWU5 503 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 RIN2Q8WYP3 895 aaPredicted RBP10.32□□□□□ -0.76
CNOT9-202ENST00000295701 SMG7Q92540 1137 aaKnown RBP10.32□□□□□ -0.76
CNOT9-202ENST00000295701 NKD2Q969F2 451 aaPredicted RBP10.32□□□□□ -0.76
CNOT9-202ENST00000295701 NT5C3AQ9H0P0 336 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 CSRNP2Q9H175 543 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 UBN1Q9NPG3 1134 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 CHST7Q9NS84 486 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 USP20Q9Y2K6 914 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 PPME1Q9Y570 386 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 CLUHO75153 1309 aa10.32□□□□□ -0.76
CNOT9-202ENST00000295701 GVINP1Q7Z2Y8 2422 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 TBX3O15119 743 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 ST8SIA5O15466 376 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 TGM5O43548 720 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 PFKFB2O60825 505 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 DCNP07585 359 aaKnown RBP10.31□□□□□ -0.76
CNOT9-202ENST00000295701 FDPSP14324 419 aaKnown RBP10.31□□□□□ -0.76
CNOT9-202ENST00000295701 GLRA2P23416 452 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 AXLP30530 894 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 FUT10Q6P4F1 479 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 LILRA6Q6PI73 481 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 PRSS55Q6UWB4 352 aaPredicted RBP10.31□□□□□ -0.76
CNOT9-202ENST00000295701 EXOC8Q8IYI6 725 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 FAM177A1Q8N128 213 aaPredicted RBP10.31□□□□□ -0.76
CNOT9-202ENST00000295701 CNNM3Q8NE01 707 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 PIGOQ8TEQ8 1089 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 HASPINQ8TF76 798 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 TNFRSF25Q93038 417 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 HSD17B14Q9BPX1 270 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 RTP3Q9BQQ7 232 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 RPP25Q9BUL9 199 aaKnown RBP10.31□□□□□ -0.76
CNOT9-202ENST00000295701 COLEC11Q9BWP8 271 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 GPRC5CQ9NQ84 441 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 IGSF9Q9P2J2 1179 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 ORC3Q9UBD5 711 aaPredicted RBP10.31□□□□□ -0.76
CNOT9-202ENST00000295701 PARP2Q9UGN5 583 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 GIT1Q9Y2X7 761 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 DMXL1Q9Y485 3027 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 FANCMQ8IYD8 2048 aa10.31□□□□□ -0.76
CNOT9-202ENST00000295701 FRYLO94915 3013 aa10.3□□□□□ -0.76
CNOT9-202ENST00000295701 TTC24A2A3L6 582 aaPredicted RBP10.3□□□□□ -0.76
CNOT9-202ENST00000295701 LRRN2O75325 713 aa10.3□□□□□ -0.76
CNOT9-202ENST00000295701 BAG4O95429 457 aaKnown RBP10.3□□□□□ -0.76
CNOT9-202ENST00000295701 LARGE1O95461 756 aa10.3□□□□□ -0.76
CNOT9-202ENST00000295701 IGFBP6P24592 240 aaPredicted RBP10.3□□□□□ -0.76
CNOT9-202ENST00000295701 NTHL1P78549 312 aa10.3□□□□□ -0.76
CNOT9-202ENST00000295701 MXD4Q14582 209 aaPredicted RBP10.3□□□□□ -0.76
CNOT9-202ENST00000295701 SPECC1Q5M775 1068 aa10.3□□□□□ -0.76
CNOT9-202ENST00000295701 GET4Q7L5D6 327 aaPredicted RBP10.3□□□□□ -0.76
CNOT9-202ENST00000295701 SLFN12Q8IYM2 578 aa10.3□□□□□ -0.76
CNOT9-202ENST00000295701 GPR152Q8TDT2 470 aa10.3□□□□□ -0.76
CNOT9-202ENST00000295701 TRIM6Q9C030 488 aaPredicted RBP10.3□□□□□ -0.76
CNOT9-202ENST00000295701 POLR3FQ9H1D9 316 aaPredicted RBP10.3□□□□□ -0.76
CNOT9-202ENST00000295701 TMEM60Q9H2L4 133 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms