RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 BFARQ9NZS9 450 aa18.77■□□□□ 0.6
CDC42EP3-201ENST00000295324 TGFB3P10600 412 aa18.77■□□□□ 0.59
CDC42EP3-201ENST00000295324 CYP2C19P33261 490 aa18.77■□□□□ 0.59
CDC42EP3-201ENST00000295324 TMTC4Q5T4D3 741 aa18.77■□□□□ 0.59
CDC42EP3-201ENST00000295324 SRRM1Q8IYB3 904 aaKnown RBP18.77■□□□□ 0.59
CDC42EP3-201ENST00000295324 KIF2CQ99661 725 aa18.77■□□□□ 0.59
CDC42EP3-201ENST00000295324 PDCD2LQ9BRP1 358 aa18.77■□□□□ 0.59
CDC42EP3-201ENST00000295324 P4HA2O15460 535 aa18.77■□□□□ 0.59
CDC42EP3-201ENST00000295324 CHEK2O96017 543 aa18.77■□□□□ 0.59
CDC42EP3-201ENST00000295324 TAF6P49848 677 aa18.77■□□□□ 0.59
CDC42EP3-201ENST00000295324 SATB1Q01826 763 aa18.77■□□□□ 0.59
CDC42EP3-201ENST00000295324 PXMP2Q9NR77 195 aa18.77■□□□□ 0.59
CDC42EP3-201ENST00000295324 CAPN11Q9UMQ6 739 aa18.77■□□□□ 0.59
CDC42EP3-201ENST00000295324 ZC3H4Q9UPT8 1303 aaKnown RBP18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 HLA-DRAP01903 254 aa18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 MGAT5BQ3V5L5 792 aa18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 ADGRA1Q86SQ6 560 aa18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 SOCS4Q8WXH5 440 aa18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 ACADSBP45954 432 aa18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 INHBEP58166 350 aa18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 ST8SIA6P61647 398 aa18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 SYTL5Q8TDW5 730 aaPredicted RBP18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 PPP1R12AO14974 1030 aaPredicted RBP18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 CLNS1AP54105 237 aaKnown RBP18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 TTC23LQ6PF05 361 aa18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 CD302Q8IX05 232 aa18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 PRG3Q9Y2Y8 225 aaPredicted RBP18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 SLC1A1P43005 524 aa18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 IFNAR2P48551 515 aa18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 GABPB1Q06547 395 aaPredicted RBP18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 MAPRE1Q15691 268 aaKnown RBP18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 KCTD16Q68DU8 428 aa18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 METTL7BQ6UX53 244 aa18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 EFHBQ8N7U6 833 aa18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 SAYSD1Q9NPB0 183 aa18.76■□□□□ 0.59
CDC42EP3-201ENST00000295324 CASQ2O14958 399 aaPredicted RBP18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 AP1B1Q10567 949 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 SEPT8Q92599 483 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 NIF3L1Q9GZT8 377 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 TAC1P20366 129 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 TPI1P60174 286 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 NOP14P78316 857 aaKnown RBP18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 APOBEC3HQ6NTF7 200 aaKnown RBP18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 RIOX1Q9H6W3 641 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 NFIBO00712 420 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 CTDNEP1O95476 244 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 ALDH1A3P47895 512 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 SULT1E1P49888 294 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 MRIQ9BWK5 157 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 TBK1Q9UHD2 729 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 TBX20Q9UMR3 447 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 KIF1AQ12756 1690 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 SUN1O94901 812 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 PDGFRAP16234 1089 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 ROR1Q01973 937 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 KSR1Q8IVT5 923 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 PPP1R12CQ9BZL4 782 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 KRT38O76015 456 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 VIL1P09327 827 aaKnown RBP18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 IRX4P78413 519 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 SEC23AQ15436 765 aa18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 ALKBH8Q96BT7 664 aaKnown RBP18.75■□□□□ 0.59
CDC42EP3-201ENST00000295324 POLR1AO95602 1720 aaPredicted RBP18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 ATP8B1O43520 1251 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 SLC37A4O43826 429 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 NAMPTP43490 491 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 USP49Q70CQ1 688 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 SLITRK1Q96PX8 696 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 ARP10275 920 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 HPDLQ96IR7 371 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 IL25Q9H293 177 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 CCDC151A5D8V7 595 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 RGS7P49802 495 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 ADCY1Q08828 1119 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 SH2D4BQ5SQS7 431 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 CLEC17AQ6ZS10 378 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 GPRC5DQ9NZD1 345 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 SNX24Q9Y343 169 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 DISP2A7MBM2 1401 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 OGTO15294 1046 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 MAP3K7O43318 606 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 DBN1Q16643 649 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 C15orf52Q6ZUT6 534 aaKnown RBP18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 UVRAGQ9P2Y5 699 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 PCDHB2Q9Y5E7 798 aa18.74■□□□□ 0.59
CDC42EP3-201ENST00000295324 VWA5AO00534 786 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 SLCO1A2P46721 670 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 DPF3Q92784 378 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 TOM1L1O75674 476 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 KLRC1P26715 233 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 TSNAXIP1Q2TAA8 658 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 MAP2P11137 1827 aaKnown RBP18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 APOL1O14791 398 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 SRGAP2O75044 1071 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 HOXC6P09630 235 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 UCHL3P15374 230 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 CLCN3P51790 818 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 ABHD16BQ9H3Z7 469 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 PDE11AQ9HCR9 933 aa18.73■□□□□ 0.59
CDC42EP3-201ENST00000295324 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms