RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 ADAM12O43184 909 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 PAPLNO95428 1278 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 PROZP22891 400 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 GUCY2CP25092 1073 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 MCM2P49736 904 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 SLC12A3P55017 1021 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 OSTNP61366 133 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 NHLH1Q02575 133 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 CACNB1Q02641 598 aaPredicted RBP10.48□□□□□ -0.73
HMHB1-201ENST00000289448 GRIN1Q05586 938 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 SOX4Q06945 474 aaPredicted RBP10.48□□□□□ -0.73
HMHB1-201ENST00000289448 DMP1Q13316 513 aaPredicted RBP10.48□□□□□ -0.73
HMHB1-201ENST00000289448 TMEM119Q4V9L6 283 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 ARSHQ5FYA8 562 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 XKR4Q5GH76 650 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 FAM171A1Q5VUB5 890 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 LARP1BQ659C4 914 aaKnown RBP10.48□□□□□ -0.73
HMHB1-201ENST00000289448 ARL6IP4Q66PJ3 421 aaKnown RBP10.48□□□□□ -0.73
HMHB1-201ENST00000289448 ALKAL1Q6UXT8 129 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 CCDC149Q6ZUS6 474 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 GPR65Q8IYL9 337 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 FBXL6Q8N531 539 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 SYT2Q8N9I0 419 aaPredicted RBP10.48□□□□□ -0.73
HMHB1-201ENST00000289448 C3orf58Q8NDZ4 430 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 TMEM161BQ8NDZ6 487 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 PRSS33Q8NF86 280 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 LNX1Q8TBB1 728 aaPredicted RBP10.48□□□□□ -0.73
HMHB1-201ENST00000289448 ZBTB45Q96K62 511 aaPredicted RBP10.48□□□□□ -0.73
HMHB1-201ENST00000289448 DRC1Q96MC2 740 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 CLSTN3Q9BQT9 956 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 NTPCRQ9BSD7 190 aaKnown RBP10.48□□□□□ -0.73
HMHB1-201ENST00000289448 TTPALQ9BTX7 342 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 GOLGA2P5Q9HBQ8 144 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 KMT5AQ9NQR1 393 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 SF3B1O75533 1304 aaKnown RBP eCLIP10.48□□□□□ -0.73
HMHB1-201ENST00000289448 PHLPP2Q6ZVD8 1323 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 PLXNA3P51805 1871 aa10.48□□□□□ -0.73
HMHB1-201ENST00000289448 RIF1Q5UIP0 2472 aaKnown RBP10.47□□□□□ -0.73
HMHB1-201ENST00000289448 C2orf16Q68DN1 1984 aa10.47□□□□□ -0.73
HMHB1-201ENST00000289448 C1RP00736 705 aa10.47□□□□□ -0.73
HMHB1-201ENST00000289448 PLA2G4BP0C869 781 aa10.47□□□□□ -0.73
HMHB1-201ENST00000289448 PLS3P13797 630 aa10.47□□□□□ -0.73
HMHB1-201ENST00000289448 GRM5P41594 1212 aa10.47□□□□□ -0.73
HMHB1-201ENST00000289448 CLCNKBP51801 687 aa10.47□□□□□ -0.73
HMHB1-201ENST00000289448 MTMR3Q13615 1198 aa10.47□□□□□ -0.73
HMHB1-201ENST00000289448 CUL4AQ13619 759 aa10.47□□□□□ -0.73
HMHB1-201ENST00000289448 UPP1Q16831 310 aa10.47□□□□□ -0.73
HMHB1-201ENST00000289448 RSPO2Q6UXX9 243 aaPredicted RBP10.47□□□□□ -0.73
HMHB1-201ENST00000289448 CEP57Q86XR8 500 aa10.47□□□□□ -0.73
HMHB1-201ENST00000289448 PLCD3Q8N3E9 789 aa10.47□□□□□ -0.73
HMHB1-201ENST00000289448 TMEM130Q8N3G9 435 aa10.47□□□□□ -0.73
HMHB1-201ENST00000289448 PIK3R5Q8WYR1 880 aa10.47□□□□□ -0.73
HMHB1-201ENST00000289448 SMG7Q92540 1137 aaKnown RBP10.47□□□□□ -0.73
HMHB1-201ENST00000289448 ZMAT2Q96NC0 199 aaKnown RBP10.47□□□□□ -0.73
HMHB1-201ENST00000289448 MRPL4Q9BYD3 311 aaKnown RBP10.47□□□□□ -0.73
HMHB1-201ENST00000289448 RHOBTB2Q9BYZ6 727 aa10.47□□□□□ -0.73
HMHB1-201ENST00000289448 NT5C3AQ9H0P0 336 aa10.47□□□□□ -0.73
HMHB1-201ENST00000289448 PLEKHA4Q9H4M7 779 aa10.47□□□□□ -0.73
HMHB1-201ENST00000289448 WDR6Q9NNW5 1121 aaKnown RBP10.47□□□□□ -0.73
HMHB1-201ENST00000289448 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.47□□□□□ -0.73
HMHB1-201ENST00000289448 SORCS3Q9UPU3 1222 aa10.47□□□□□ -0.73
HMHB1-201ENST00000289448 CFAP54Q96N23 3096 aa10.47□□□□□ -0.73
HMHB1-201ENST00000289448 DENND4AQ7Z401 1863 aa10.47□□□□□ -0.73
HMHB1-201ENST00000289448 DOCK6Q96HP0 2047 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 TMEM189-UBE2V1I3L0A0 370 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 I3L4J1 428 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 B3GAT3O94766 335 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 MAPTP10636 758 aaKnown RBP10.46□□□□□ -0.73
HMHB1-201ENST00000289448 MCF2P10911 925 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 FGFR3P22607 806 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 ANP32AP39687 249 aaKnown RBP10.46□□□□□ -0.73
HMHB1-201ENST00000289448 TCF15Q12870 199 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 PSMD5Q16401 504 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 ZNF568Q3ZCX4 644 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 SEZ6Q53EL9 994 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 DCLRE1AQ6PJP8 1040 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 MPZL3Q6UWV2 235 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 OTOP3Q7RTS5 596 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 SUGP1Q8IWZ8 645 aaKnown RBP10.46□□□□□ -0.73
HMHB1-201ENST00000289448 UBALD2Q8IYN6 164 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 HDAC7Q8WUI4 952 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 SPIRE2Q8WWL2 714 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 RSAD2Q8WXG1 361 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 ACSF2Q96CM8 615 aaPredicted RBP10.46□□□□□ -0.73
HMHB1-201ENST00000289448 SNX27Q96L92 541 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 MYADMQ96S97 322 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 PHOX2BQ99453 314 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 TIPINQ9BVW5 301 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 CCDC94Q9BW85 323 aaPredicted RBP10.46□□□□□ -0.73
HMHB1-201ENST00000289448 PRKD2Q9BZL6 878 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 HAPLN2Q9GZV7 340 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 KCNH6Q9H252 994 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 C17orf75Q9HAS0 396 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 KCNK12Q9HB15 430 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 BLOC1S4Q9NUP1 217 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 FBXW11Q9UKB1 542 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.46□□□□□ -0.73
HMHB1-201ENST00000289448 CLUHO75153 1309 aa10.46□□□□□ -0.73
HMHB1-201ENST00000289448 DOCK8Q8NF50 2099 aa10.45□□□□□ -0.74
HMHB1-201ENST00000289448 TRIP11Q15643 1979 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms