RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 MFSD5Q6N075 450 aa11.24□□□□□ -0.61
ERCC3-201ENST00000285398 ZNF571Q7Z3V5 609 aaPredicted RBP11.24□□□□□ -0.61
ERCC3-201ENST00000285398 IRF2BP2Q7Z5L9 587 aa11.24□□□□□ -0.61
ERCC3-201ENST00000285398 PRRT2Q7Z6L0 340 aaPredicted RBP11.24□□□□□ -0.61
ERCC3-201ENST00000285398 ZNF713Q8N859 430 aaPredicted RBP11.24□□□□□ -0.61
ERCC3-201ENST00000285398 C2orf69Q8N8R5 385 aa11.24□□□□□ -0.61
ERCC3-201ENST00000285398 RBM46Q8TBY0 533 aaKnown RBP11.24□□□□□ -0.61
ERCC3-201ENST00000285398 CLEC4DQ8WXI8 215 aa11.24□□□□□ -0.61
ERCC3-201ENST00000285398 C12orf42Q96LP6 360 aa11.24□□□□□ -0.61
ERCC3-201ENST00000285398 ROPN1BQ9BZX4 212 aaPredicted RBP11.24□□□□□ -0.61
ERCC3-201ENST00000285398 ROPN1Q9HAT0 212 aaPredicted RBP11.24□□□□□ -0.61
ERCC3-201ENST00000285398 ETNK1Q9HBU6 452 aa11.24□□□□□ -0.61
ERCC3-201ENST00000285398 PNMA3Q9UL41 463 aa11.24□□□□□ -0.61
ERCC3-201ENST00000285398 NENFQ9UMX5 172 aa11.24□□□□□ -0.61
ERCC3-201ENST00000285398 H2AFZP0C0S5 128 aa11.24□□□□□ -0.61
ERCC3-201ENST00000285398 TXKP42681 527 aa11.24□□□□□ -0.61
ERCC3-201ENST00000285398 COASYQ13057 564 aa11.24□□□□□ -0.61
ERCC3-201ENST00000285398 TMEM119Q4V9L6 283 aa11.24□□□□□ -0.61
ERCC3-201ENST00000285398 H2AFVQ71UI9 128 aa11.24□□□□□ -0.61
ERCC3-201ENST00000285398 FBXO25Q8TCJ0 367 aa11.24□□□□□ -0.61
ERCC3-201ENST00000285398 PIGOQ8TEQ8 1089 aa11.24□□□□□ -0.61
ERCC3-201ENST00000285398 STK32AQ8WU08 396 aa11.24□□□□□ -0.61
ERCC3-201ENST00000285398 RUNDC3BQ96NL0 473 aa11.24□□□□□ -0.61
ERCC3-201ENST00000285398 ASCC2Q9H1I8 757 aaPredicted RBP11.24□□□□□ -0.61
ERCC3-201ENST00000285398 TXNRD2Q9NNW7 524 aa11.24□□□□□ -0.61
ERCC3-201ENST00000285398 BTBD7Q9P203 1132 aa11.24□□□□□ -0.61
ERCC3-201ENST00000285398 ZBED4O75132 1171 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 ACADSP16219 412 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 ATP5DP30049 168 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 RAD23BP54727 409 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 AUHQ13825 339 aaKnown RBP11.23□□□□□ -0.61
ERCC3-201ENST00000285398 RNF43Q68DV7 783 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 PPP1R18Q6NYC8 613 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 EPS8L3Q8TE67 593 aaKnown RBP11.23□□□□□ -0.61
ERCC3-201ENST00000285398 SEMA4AQ9H3S1 761 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 WDR35Q9P2L0 1181 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 PRKAG3Q9UGI9 489 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 C2CD2Q9Y426 696 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 PAPPA2Q9BXP8 1791 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 RPTORQ8N122 1335 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 EIF4E1BA6NMX2 242 aaKnown RBP11.23□□□□□ -0.61
ERCC3-201ENST00000285398 FAM86B1E9PN63 330 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 PLA2G6O60733 806 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 FAM86B2P0C5J1 330 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 POLR2MP0CAP2 368 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 SLCO1A2P46721 670 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 RPS6P62753 249 aaKnown RBP11.23□□□□□ -0.61
ERCC3-201ENST00000285398 PPIL2Q13356 520 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 PRPF4BQ13523 1007 aaKnown RBP11.23□□□□□ -0.61
ERCC3-201ENST00000285398 CALCRLQ16602 461 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 PRR16Q569H4 304 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 SH3D19Q5HYK7 790 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 FAM26FQ5R3K3 315 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 JAMLQ86YT9 394 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 ZC3H3Q8IXZ2 948 aaKnown RBP11.23□□□□□ -0.61
ERCC3-201ENST00000285398 REPS2Q8NFH8 660 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 IL31RAQ8NI17 732 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 GRAMD1AQ96CP6 724 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 DNAJC19Q96DA6 116 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 TRIM4Q9C037 500 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 CARD9Q9H257 536 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 RNF146Q9NTX7 359 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 CYP39A1Q9NYL5 469 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 TRIM33Q9UPN9 1127 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 SNX24Q9Y343 169 aa11.23□□□□□ -0.61
ERCC3-201ENST00000285398 TTC36A6NLP5 189 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 PODXLO00592 558 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 KIAA0391O15091 583 aaKnown RBP11.22□□□□□ -0.61
ERCC3-201ENST00000285398 RIPK2O43353 540 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 PDHA1P08559 390 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 PRKCIP41743 596 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 ARHGAP4P98171 946 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 MAPK7Q13164 816 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 LRRC14Q15048 493 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 KCTD19Q17RG1 926 aaPredicted RBP11.22□□□□□ -0.61
ERCC3-201ENST00000285398 TMEM266Q2M3C6 531 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 DPY19L2P1Q6NXN4 242 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 TMEM154Q6P9G4 183 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 ZDHHC24Q6UX98 284 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 MAEAQ7L5Y9 396 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 KCNK18Q7Z418 384 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 EXOC3L1Q86VI1 746 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.22□□□□□ -0.617e-8■■■■■ 87
ERCC3-201ENST00000285398 AGGF1Q8N302 714 aaeCLIP11.22□□□□□ -0.61
ERCC3-201ENST00000285398 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.22□□□□□ -0.61
ERCC3-201ENST00000285398 PKD2L1Q9P0L9 805 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 NKX1-2Q9UD57 310 aaPredicted RBP11.22□□□□□ -0.61
ERCC3-201ENST00000285398 KCNH4Q9UQ05 1017 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 TMEM120BA0PK00 339 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 TPBGLP0DKB5 382 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 EIF2AK2P19525 551 aaKnown RBP11.22□□□□□ -0.61
ERCC3-201ENST00000285398 PEX5P50542 639 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 ACVR2BQ13705 512 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 Q3C1V9 767 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 WDR78Q5VTH9 848 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 GPAT2Q6NUI2 795 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 MGARPQ8TDB4 240 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 SNX29Q8TEQ0 813 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 BRI3BPQ8WY22 251 aa11.22□□□□□ -0.61
ERCC3-201ENST00000285398 EZH1Q92800 747 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms