RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 TRIM62Q9BVG3 475 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 KIFC3Q9BVG8 833 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 AGPAT3Q9NRZ7 376 aa11.95□□□□□ -0.5
USP6NL-201ENST00000277575 PIK3R2O00459 728 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 PDGFRBP09619 1106 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 NLRP11P59045 1033 aaKnown RBP11.94□□□□□ -0.5
USP6NL-201ENST00000277575 PDCLQ13371 301 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 HP1BP3Q5SSJ5 553 aaPredicted RBP11.94□□□□□ -0.5
USP6NL-201ENST00000277575 ATG16L1Q676U5 607 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 CDR2LQ86X02 465 aaPredicted RBP11.94□□□□□ -0.5
USP6NL-201ENST00000277575 PGBD4Q96DM1 585 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.94□□□□□ -0.5
USP6NL-201ENST00000277575 ZFXP17010 805 aaPredicted RBP11.94□□□□□ -0.5
USP6NL-201ENST00000277575 MMP14P50281 582 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 AP1B1Q10567 949 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 TMTC4Q5T4D3 741 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 C1orf228Q6PIY5 440 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 CDKL3Q8IVW4 592 aaPredicted RBP11.94□□□□□ -0.5
USP6NL-201ENST00000277575 GANCQ8TET4 914 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 RUSC1Q9BVN2 902 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 VCAM1P19320 739 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 TMPRSS15P98073 1019 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 NAB2Q15742 525 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 KLHL38Q2WGJ6 581 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 PID1Q7Z2X4 250 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 IFT43Q96FT9 208 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 SLC4A9Q96Q91 983 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 ERGIC2Q96RQ1 377 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 PITPNM3Q9BZ71 974 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 KCNF1Q9H3M0 494 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 MAP3K20Q9NYL2 800 aaKnown RBP11.94□□□□□ -0.5
USP6NL-201ENST00000277575 RRN3P2A6NIE6 340 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 RSPH10B2B2RC85 870 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 F5H423 210 aaPredicted RBP11.94□□□□□ -0.5
USP6NL-201ENST00000277575 F8W8V4 182 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 P4HA2O15460 535 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 EXTL3O43909 919 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 RSPH10BP0C881 870 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 SHMT1P34896 483 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 PDIA2Q13087 525 aaKnown RBP11.94□□□□□ -0.5
USP6NL-201ENST00000277575 NR1H3Q13133 447 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 DHX34Q14147 1143 aaKnown RBP11.94□□□□□ -0.5
USP6NL-201ENST00000277575 IZUMO3Q5VZ72 239 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 PDCD7Q8N8D1 485 aaKnown RBP11.94□□□□□ -0.5
USP6NL-201ENST00000277575 GMCL1P1Q8NEA9 526 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 EXT2Q93063 718 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 MAGEB5Q9BZ81 275 aa11.94□□□□□ -0.5
USP6NL-201ENST00000277575 IL18RAPO95256 599 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 CD4P01730 458 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 MMEP08473 750 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 WEE2P0C1S8 567 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 CACNB2Q08289 660 aaPredicted RBP11.93□□□□□ -0.5
USP6NL-201ENST00000277575 DDR1Q08345 913 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 KIAA1755Q5JYT7 1200 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 ITPRIPL1Q6GPH6 555 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 TRIM67Q6ZTA4 783 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 CEP120Q8N960 986 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 VPS11Q9H270 941 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 GPRC5CQ9NQ84 441 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 ADAM21Q9UKJ8 722 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 TBX20Q9UMR3 447 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 HPSEQ9Y251 543 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 NFIBO00712 420 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 HOXA10P31260 410 aaPredicted RBP11.93□□□□□ -0.5
USP6NL-201ENST00000277575 KLHDC7AQ5VTJ3 777 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 ZBED8Q8IZ13 594 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 ATL2Q8NHH9 583 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 MAML1Q92585 1016 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 LRGUKQ96M69 825 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 EPAS1Q99814 870 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 NT5C1AQ9BXI3 368 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 KBTBD4Q9NVX7 518 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.93□□□□□ -0.5
USP6NL-201ENST00000277575 PPLO60437 1756 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 KBTBD13C9JR72 458 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 DPYSL4O14531 572 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 TTI1O43156 1089 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 GAS2O43903 313 aaKnown RBP11.93□□□□□ -0.5
USP6NL-201ENST00000277575 GGCXP38435 758 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 CASP2P42575 452 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 HSD17B4P51659 736 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 GTF2A2P52657 109 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 GYS2P54840 703 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 MAGOHP61326 146 aaKnown RBP11.93□□□□□ -0.5
USP6NL-201ENST00000277575 PKN1Q16512 942 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 FAM133BQ5BKY9 247 aaKnown RBP11.93□□□□□ -0.5
USP6NL-201ENST00000277575 GLB1LQ6UWU2 654 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 WDR75Q8IWA0 830 aaKnown RBP11.93□□□□□ -0.5
USP6NL-201ENST00000277575 FAM163AQ96GL9 167 aaPredicted RBP11.93□□□□□ -0.5
USP6NL-201ENST00000277575 ELAC2Q9BQ52 826 aaKnown RBP11.93□□□□□ -0.5
USP6NL-201ENST00000277575 PI4K2AQ9BTU6 479 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 NIF3L1Q9GZT8 377 aa11.93□□□□□ -0.5
USP6NL-201ENST00000277575 PRDM5Q9NQX1 630 aaPredicted RBP11.93□□□□□ -0.5
USP6NL-201ENST00000277575 TADA2AO75478 443 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 TTC4O95801 387 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 NCF2P19878 526 aaPredicted RBP11.92□□□□□ -0.5
USP6NL-201ENST00000277575 NNMTP40261 264 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 ARSEP51690 589 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 SPATA2LQ8IUW3 424 aaPredicted RBP11.92□□□□□ -0.5
USP6NL-201ENST00000277575 SCG3Q8WXD2 468 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms