RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 EPS15L1Q9UBC2 864 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 GIT1Q9Y2X7 761 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 NOTCH4Q99466 2003 aa9.94□□□□□ -0.82
TPM3-201ENST00000271850 NEMFO60524 1076 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 KIF4AO95239 1232 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 GLUD1P00367 558 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 TXKP42681 527 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 CLCN5P51795 746 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 ANAPC15P60006 121 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 PCBP1Q15365 356 aaKnown RBP eCLIP9.93□□□□□ -0.826e-17■■□□□ 14.2
TPM3-201ENST00000271850 EEF1DP3Q658K8 133 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 SLC27A1Q6PCB7 646 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 OTOP3Q7RTS5 596 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 FRMD5Q7Z6J6 570 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 CATSPER3Q86XQ3 398 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 PALB2Q86YC2 1186 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 GLYCTKQ8IVS8 523 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 EXOC8Q8IYI6 725 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 FLCNQ8NFG4 579 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 HASPINQ8TF76 798 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 NAP1L4Q99733 375 aaKnown RBP9.93□□□□□ -0.82
TPM3-201ENST00000271850 RPP25Q9BUL9 199 aaKnown RBP9.93□□□□□ -0.82
TPM3-201ENST00000271850 CCDC113Q9H0I3 377 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 NT5C3AQ9H0P0 336 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 PDZD7Q9H5P4 517 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 POLD4Q9HCU8 107 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 UBN1Q9NPG3 1134 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 ADAM28Q9UKQ2 775 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 PCDHA12Q9UN75 941 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 GPR179Q6PRD1 2367 aa9.93□□□□□ -0.82
TPM3-201ENST00000271850 ZMYM2Q9UBW7 1377 aa9.92□□□□□ -0.82
TPM3-201ENST00000271850 EP300Q09472 2414 aaPredicted RBP9.92□□□□□ -0.82
TPM3-201ENST00000271850 CASTOR2A6NHX0 329 aa9.92□□□□□ -0.82
TPM3-201ENST00000271850 ADH1AP07327 375 aa9.92□□□□□ -0.82
TPM3-201ENST00000271850 CFHP08603 1231 aa9.92□□□□□ -0.82
TPM3-201ENST00000271850 XBP1P17861 261 aa9.92□□□□□ -0.82
TPM3-201ENST00000271850 NTHL1P78549 312 aa9.92□□□□□ -0.82
TPM3-201ENST00000271850 GRIK3Q13003 919 aa9.92□□□□□ -0.82
TPM3-201ENST00000271850 FAM187BQ17R55 369 aa9.92□□□□□ -0.82
TPM3-201ENST00000271850 TSR1Q2NL82 804 aaKnown RBP9.92□□□□□ -0.82
TPM3-201ENST00000271850 RSPO2Q6UXX9 243 aaPredicted RBP9.92□□□□□ -0.82
TPM3-201ENST00000271850 CCDC105Q8IYK2 499 aa9.92□□□□□ -0.82
TPM3-201ENST00000271850 SIX5Q8N196 739 aa9.92□□□□□ -0.82
TPM3-201ENST00000271850 SLC44A3Q8N4M1 653 aa9.92□□□□□ -0.82
TPM3-201ENST00000271850 TMEM87AQ8NBN3 555 aa9.92□□□□□ -0.82
TPM3-201ENST00000271850 LNX1Q8TBB1 728 aaPredicted RBP9.92□□□□□ -0.82
TPM3-201ENST00000271850 RIN2Q8WYP3 895 aaPredicted RBP9.92□□□□□ -0.82
TPM3-201ENST00000271850 SMG7Q92540 1137 aaKnown RBP9.92□□□□□ -0.82
TPM3-201ENST00000271850 ACSF2Q96CM8 615 aaPredicted RBP9.92□□□□□ -0.82
TPM3-201ENST00000271850 CLSTN3Q9BQT9 956 aa9.92□□□□□ -0.82
TPM3-201ENST00000271850 KIFC3Q9BVG8 833 aa9.92□□□□□ -0.82
TPM3-201ENST00000271850 SNTG2Q9NY99 539 aa9.92□□□□□ -0.82
TPM3-201ENST00000271850 DLGAP2Q9P1A6 1054 aa9.92□□□□□ -0.82
TPM3-201ENST00000271850 FNIP2Q9P278 1114 aa9.92□□□□□ -0.82
TPM3-201ENST00000271850 STK39Q9UEW8 545 aa9.92□□□□□ -0.82
TPM3-201ENST00000271850 FBXW11Q9UKB1 542 aa9.92□□□□□ -0.82
TPM3-201ENST00000271850 CACNA1AO00555 2505 aa9.91□□□□□ -0.82
TPM3-201ENST00000271850 LRRIQ4A6NIV6 560 aa9.91□□□□□ -0.82
TPM3-201ENST00000271850 ANHXE9PGG2 379 aa9.91□□□□□ -0.82
TPM3-201ENST00000271850 SMAPO00193 183 aa9.91□□□□□ -0.82
TPM3-201ENST00000271850 MEFVO15553 781 aaPredicted RBP9.91□□□□□ -0.82
TPM3-201ENST00000271850 MARCH6O60337 910 aa9.91□□□□□ -0.82
TPM3-201ENST00000271850 RECQL4O94761 1208 aa9.91□□□□□ -0.82
TPM3-201ENST00000271850 BAG4O95429 457 aaKnown RBP9.91□□□□□ -0.82
TPM3-201ENST00000271850 GLULP15104 373 aa9.91□□□□□ -0.82
TPM3-201ENST00000271850 PRSS12P56730 875 aa9.91□□□□□ -0.82
TPM3-201ENST00000271850 GUCY1B3Q02153 619 aa9.91□□□□□ -0.82
TPM3-201ENST00000271850 HTR4Q13639 388 aa9.91□□□□□ -0.82
TPM3-201ENST00000271850 TFDP1Q14186 410 aa9.91□□□□□ -0.82
TPM3-201ENST00000271850 HSP90AA2PQ14568 343 aaPredicted RBP9.91□□□□□ -0.82
TPM3-201ENST00000271850 C4orf32Q8N8J7 132 aa9.91□□□□□ -0.82
TPM3-201ENST00000271850 C3orf58Q8NDZ4 430 aa9.91□□□□□ -0.82
TPM3-201ENST00000271850 SNX27Q96L92 541 aa9.91□□□□□ -0.82
TPM3-201ENST00000271850 IGSF9Q9P2J2 1179 aa9.91□□□□□ -0.82
TPM3-201ENST00000271850 PARP2Q9UGN5 583 aa9.91□□□□□ -0.82
TPM3-201ENST00000271850 OTOGLQ3ZCN5 2332 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 RNF40O75150 1001 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 ZMYND10O75800 440 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 XRCC6P12956 609 aaKnown RBP eCLIP9.9□□□□□ -0.829e-13■□□□□ 8.6
TPM3-201ENST00000271850 LAMP2P13473 410 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 ATP2B1P20020 1258 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 GBP2P32456 591 aaPredicted RBP9.9□□□□□ -0.82
TPM3-201ENST00000271850 MCM7P33993 719 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 TUSC3Q13454 348 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 ANGPT1Q15389 498 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 USP41Q3LFD5 358 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 NT5DC1Q5TFE4 455 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 GET4Q7L5D6 327 aaPredicted RBP9.9□□□□□ -0.82
TPM3-201ENST00000271850 TAS1R3Q7RTX0 852 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 NOSTRINQ8IVI9 506 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 GPR65Q8IYL9 337 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 TMEM130Q8N3G9 435 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 CEP120Q8N960 986 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 DTWD2Q8NBA8 298 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 GPR152Q8TDT2 470 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 HDAC7Q8WUI4 952 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 WASF1Q92558 559 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 FGF14Q92915 247 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 PRIMPOLQ96LW4 560 aa9.9□□□□□ -0.82
TPM3-201ENST00000271850 POLR3CQ9BUI4 534 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms