RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 IFIH1Q9BYX4 1025 aaKnown RBP16.61■□□□□ 0.25
COPS3-201ENST00000268717 PCDHA13Q9Y5I0 950 aa16.61■□□□□ 0.25
COPS3-201ENST00000268717 NRCAMQ92823 1304 aa16.6■□□□□ 0.25
COPS3-201ENST00000268717 ABLIM1O14639 778 aa16.6■□□□□ 0.25
COPS3-201ENST00000268717 RIOK3O14730 519 aaKnown RBP16.6■□□□□ 0.25
COPS3-201ENST00000268717 DYNC1LI2O43237 492 aaPredicted RBP16.6■□□□□ 0.25
COPS3-201ENST00000268717 FAM189A1O60320 539 aa16.6■□□□□ 0.25
COPS3-201ENST00000268717 CASQ1P31415 396 aa16.6■□□□□ 0.25
COPS3-201ENST00000268717 AP3M2P53677 418 aa16.6■□□□□ 0.25
COPS3-201ENST00000268717 NLRP11P59045 1033 aaKnown RBP16.6■□□□□ 0.25
COPS3-201ENST00000268717 MBTD1Q05BQ5 628 aa16.6■□□□□ 0.25
COPS3-201ENST00000268717 KIF5AQ12840 1032 aa16.6■□□□□ 0.25
COPS3-201ENST00000268717 TUBB2AQ13885 445 aa16.6■□□□□ 0.25
COPS3-201ENST00000268717 GNASQ5JWF2 1037 aa16.6■□□□□ 0.25
COPS3-201ENST00000268717 PHLDB3Q6NSJ2 640 aa16.6■□□□□ 0.25
COPS3-201ENST00000268717 VPS36Q86VN1 386 aa16.6■□□□□ 0.25
COPS3-201ENST00000268717 CCDC127Q96BQ5 260 aa16.6■□□□□ 0.25
COPS3-201ENST00000268717 FNBP1Q96RU3 617 aa16.6■□□□□ 0.25
COPS3-201ENST00000268717 MAP7D2Q96T17 732 aa16.6■□□□□ 0.25
COPS3-201ENST00000268717 TUBB2BQ9BVA1 445 aa16.6■□□□□ 0.25
COPS3-201ENST00000268717 HAPLN2Q9GZV7 340 aa16.6■□□□□ 0.25
COPS3-201ENST00000268717 PTPRHQ9HD43 1115 aa16.6■□□□□ 0.25
COPS3-201ENST00000268717 ZMYND8Q9ULU4 1186 aaPredicted RBP16.6■□□□□ 0.25
COPS3-201ENST00000268717 OGTO15294 1046 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 ASGR1P07306 291 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 BEX3Q00994 111 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 DRAP1Q14919 205 aaPredicted RBP16.59■□□□□ 0.25
COPS3-201ENST00000268717 SURF1Q15526 300 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 MARCH8Q5T0T0 291 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 CCDC122Q5T0U0 273 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 MPZL3Q6UWV2 235 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 SV2AQ7L0J3 742 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 ENOSF1Q7L5Y1 443 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 ZNF410Q86VK4 478 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 BRSK2Q8IWQ3 736 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 NLRP4Q96MN2 994 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 WDR24Q96S15 920 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 CGRRF1Q99675 332 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 GPR88Q9GZN0 384 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 AP5M1Q9H0R1 490 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 IFT122Q9HBG6 1241 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 RAB20Q9NX57 234 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 RBAKQ9NYW8 714 aaPredicted RBP16.59■□□□□ 0.25
COPS3-201ENST00000268717 ANKFY1Q9P2R3 1169 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 AJAP1Q9UKB5 411 aaPredicted RBP16.59■□□□□ 0.25
COPS3-201ENST00000268717 TNFSF13BQ9Y275 285 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 ATP11BQ9Y2G3 1177 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 EVPLQ92817 2033 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 A0A0U1RQJ8 604 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 HAS3O00219 553 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 ZEB2O60315 1214 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 SYN1P17600 705 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 IGBP1P78318 339 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 BMS1Q14692 1282 aaKnown RBP16.59■□□□□ 0.25
COPS3-201ENST00000268717 FSCN1Q16658 493 aaKnown RBP16.59■□□□□ 0.25
COPS3-201ENST00000268717 ZACNQ401N2 412 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 TRIM60Q495X7 471 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 GJB7Q6PEY0 223 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 ATRIPQ8WXE1 791 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 ZBTB10Q96DT7 871 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 ZBTB45Q96K62 511 aaPredicted RBP16.59■□□□□ 0.25
COPS3-201ENST00000268717 KATNAL1Q9BW62 490 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 STARD7Q9NQZ5 370 aa16.59■□□□□ 0.25
COPS3-201ENST00000268717 COLQQ9Y215 455 aaPredicted RBP16.59■□□□□ 0.25
COPS3-201ENST00000268717 CNTNAP2Q9UHC6 1331 aa16.58■□□□□ 0.24
COPS3-201ENST00000268717 MBLAC1A4D2B0 266 aaPredicted RBP16.58■□□□□ 0.24
COPS3-201ENST00000268717 FANCGO15287 622 aa16.58■□□□□ 0.24
COPS3-201ENST00000268717 KPNA6O60684 536 aa16.58■□□□□ 0.24
COPS3-201ENST00000268717 DLATP10515 647 aaKnown RBP16.58■□□□□ 0.24
COPS3-201ENST00000268717 MATR3P43243 847 aaKnown RBP eCLIP16.58■□□□□ 0.24
COPS3-201ENST00000268717 MAGEA1P43355 309 aa16.58■□□□□ 0.24
COPS3-201ENST00000268717 CYP27A1Q02318 531 aa16.58■□□□□ 0.24
COPS3-201ENST00000268717 PTK2Q05397 1052 aa16.58■□□□□ 0.24
COPS3-201ENST00000268717 PRPF4BQ13523 1007 aaKnown RBP16.58■□□□□ 0.24
COPS3-201ENST00000268717 PCBP1Q15365 356 aaKnown RBP eCLIP16.58■□□□□ 0.24
COPS3-201ENST00000268717 KYAT1Q16773 422 aa16.58■□□□□ 0.24
COPS3-201ENST00000268717 ATF7IP2Q5U623 682 aa16.58■□□□□ 0.24
COPS3-201ENST00000268717 CHRDL2Q6WN34 429 aa16.58■□□□□ 0.24
COPS3-201ENST00000268717 ZNF571Q7Z3V5 609 aaPredicted RBP16.58■□□□□ 0.24
COPS3-201ENST00000268717 ZNF710Q8N1W2 664 aa16.58■□□□□ 0.24
COPS3-201ENST00000268717 KAT2BQ92831 832 aa16.58■□□□□ 0.24
COPS3-201ENST00000268717 GLT1D1Q96MS3 346 aa16.58■□□□□ 0.24
COPS3-201ENST00000268717 NENFQ9UMX5 172 aa16.58■□□□□ 0.24
COPS3-201ENST00000268717 AKT3Q9Y243 479 aa16.58■□□□□ 0.24
COPS3-201ENST00000268717 UQCRHLA0A096LP55 91 aa16.57■□□□□ 0.24
COPS3-201ENST00000268717 BTNL10A8MVZ5 291 aa16.57■□□□□ 0.24
COPS3-201ENST00000268717 INO80B-WBP1J3KQ70 363 aa16.57■□□□□ 0.24
COPS3-201ENST00000268717 CTIFO43310 598 aaKnown RBP16.57■□□□□ 0.24
COPS3-201ENST00000268717 C4BPAP04003 597 aaKnown RBP16.57■□□□□ 0.24
COPS3-201ENST00000268717 UQCRHP07919 91 aa16.57■□□□□ 0.24
COPS3-201ENST00000268717 ACOT2P49753 483 aa16.57■□□□□ 0.24
COPS3-201ENST00000268717 MFAP3P55082 362 aa16.57■□□□□ 0.24
COPS3-201ENST00000268717 GCNT1Q02742 428 aa16.57■□□□□ 0.24
COPS3-201ENST00000268717 GFPT1Q06210 699 aaPredicted RBP16.57■□□□□ 0.24
COPS3-201ENST00000268717 ZNF569Q5MCW4 686 aa16.57■□□□□ 0.24
COPS3-201ENST00000268717 SRGAP1Q7Z6B7 1085 aa16.57■□□□□ 0.24
COPS3-201ENST00000268717 WDR49Q8IV35 697 aa16.57■□□□□ 0.24
COPS3-201ENST00000268717 RNF10Q8N5U6 811 aaKnown RBP16.57■□□□□ 0.24
COPS3-201ENST00000268717 TAS1R2Q8TE23 839 aa16.57■□□□□ 0.24
COPS3-201ENST00000268717 NT5C1BQ96P26 610 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms