RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 STX1BP61266 288 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 NME3Q13232 169 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 EFHC2Q5JST6 749 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 SH2D4BQ5SQS7 431 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 SLC30A10Q6XR72 485 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 CYP2W1Q8TAV3 490 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 DHX38Q92620 1227 aaKnown RBP16.34■□□□□ 0.21
TIMP3-201ENST00000266085 HVCN1Q96D96 273 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 TBX20Q9UMR3 447 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 DISP2A7MBM2 1401 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 MOCS2O96007 188 aaPredicted RBP16.34■□□□□ 0.21
TIMP3-201ENST00000266085 CD44P16070 742 aaKnown RBP16.34■□□□□ 0.21
TIMP3-201ENST00000266085 NOP14P78316 857 aaKnown RBP16.34■□□□□ 0.21
TIMP3-201ENST00000266085 GPS1Q13098 491 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 CERS5Q8N5B7 392 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 CPA5Q8WXQ8 436 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 TMEM8AQ9HCN3 771 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 PCDHB2Q9Y5E7 798 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 GOLGA8MH3BSY2 632 aa16.33■□□□□ 0.21
TIMP3-201ENST00000266085 TADA3O75528 432 aa16.33■□□□□ 0.21
TIMP3-201ENST00000266085 GCLCP48506 637 aaPredicted RBP16.33■□□□□ 0.21
TIMP3-201ENST00000266085 CLNS1AP54105 237 aaKnown RBP16.33■□□□□ 0.21
TIMP3-201ENST00000266085 NAB2Q15742 525 aa16.33■□□□□ 0.21
TIMP3-201ENST00000266085 JADE1Q6IE81 842 aa16.33■□□□□ 0.21
TIMP3-201ENST00000266085 AFG1LQ8WV93 481 aa16.33■□□□□ 0.21
TIMP3-201ENST00000266085 WDR35Q9P2L0 1181 aa16.33■□□□□ 0.21
TIMP3-201ENST00000266085 PIK3R2O00459 728 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 P4HA2O15460 535 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 DHX34Q14147 1143 aaKnown RBP16.33■□□□□ 0.2
TIMP3-201ENST00000266085 MUM1Q2TAK8 710 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 C15orf52Q6ZUT6 534 aaKnown RBP16.33■□□□□ 0.2
TIMP3-201ENST00000266085 PI4K2AQ9BTU6 479 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 VPS33BQ9H267 617 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 SLC8A2Q9UPR5 921 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 A0A1W2PQJ5 194 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 CYTH3O43739 400 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 PDGFRBP09619 1106 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 PMS2P54278 862 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 STILQ15468 1287 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 SLC35G2Q8TBE7 412 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 C1orf54Q8WWF1 131 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 ANKS1AQ92625 1134 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 SPATC1LQ9H0A9 340 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 GAKO14976 1311 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 KIF1AQ12756 1690 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 RRN3P2A6NIE6 340 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 LCP1P13796 627 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 RGS7P49802 495 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 NR1H3Q13133 447 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 SPARCL1Q14515 664 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 FKBP1CQ5VVH2 108 aa16.33■□□□□ 0.2
TIMP3-201ENST00000266085 FBXO16Q8IX29 292 aaPredicted RBP16.33■□□□□ 0.2
TIMP3-201ENST00000266085 EXTL3O43909 919 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 GGCXP38435 758 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 PDCLQ13371 301 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 SRRM1Q8IYB3 904 aaKnown RBP16.32■□□□□ 0.2
TIMP3-201ENST00000266085 SAMD3Q8N6K7 520 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 OPTNQ96CV9 577 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 UBN1Q9NPG3 1134 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 PXMP2Q9NR77 195 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 KRT14P02533 472 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 WEE2P0C1S8 567 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 SREBF2Q12772 1141 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 FSD1LQ9BXM9 530 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 COPEO14579 308 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 TRAPPC3O43617 180 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 SUPT20HL2P0C7V6 817 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 CLCN3P51790 818 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 HERVK_113P62684 666 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 KLHDC7AQ5VTJ3 777 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 ELMSAN1Q6PJG2 1045 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 MMS22LQ6ZRQ5 1243 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 PLEKHH3Q7Z736 793 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 APPL2Q8NEU8 664 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 FAM198AQ9UFP1 575 aa16.32■□□□□ 0.2
TIMP3-201ENST00000266085 KBTBD13C9JR72 458 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 GIT2Q14161 759 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 TAF1BQ53T94 588 aaPredicted RBP16.31■□□□□ 0.2
TIMP3-201ENST00000266085 GPC2Q8N158 579 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 GLIS2Q9BZE0 524 aaPredicted RBP16.31■□□□□ 0.2
TIMP3-201ENST00000266085 PRDM5Q9NQX1 630 aaPredicted RBP16.31■□□□□ 0.2
TIMP3-201ENST00000266085 TRIM10Q9UDY6 481 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 PAMP19021 973 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 DSG3P32926 999 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 FKBP1AP62942 108 aaKnown RBP16.31■□□□□ 0.2
TIMP3-201ENST00000266085 KLHL38Q2WGJ6 581 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 SEZ6Q53EL9 994 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 PCNX4Q63HM2 1172 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 ATG16L1Q676U5 607 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 TARSL2A2RTX5 802 aaKnown RBP16.31■□□□□ 0.2
TIMP3-201ENST00000266085 MMEP08473 750 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 PDGFRAP16234 1089 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 RIC1Q4ADV7 1423 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 COG1Q8WTW3 980 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 PITPNM3Q9BZ71 974 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 CACYBPQ9HB71 228 aaKnown RBP16.31■□□□□ 0.2
TIMP3-201ENST00000266085 BFARQ9NZS9 450 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 PLAGL2Q9UPG8 496 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 ADM5C9JUS6 153 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 PI4K2BG5E9Z4 385 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms