RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 TTBK2Q6IQ55 1244 aa13.21□□□□□ -0.3
CHMP2B-201ENST00000263780 CCDC89Q8N998 374 aa13.21□□□□□ -0.3
CHMP2B-201ENST00000263780 CFAP57Q96MR6 1250 aa13.21□□□□□ -0.3
CHMP2B-201ENST00000263780 UIMC1Q96RL1 719 aa13.21□□□□□ -0.3
CHMP2B-201ENST00000263780 TMX4Q9H1E5 349 aaPredicted RBP13.21□□□□□ -0.3
CHMP2B-201ENST00000263780 TBK1Q9UHD2 729 aa13.21□□□□□ -0.3
CHMP2B-201ENST00000263780 ZMYM2Q9UBW7 1377 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 TP73O15350 636 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 ZWINTO95229 277 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 PDHA1P08559 390 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 DLATP10515 647 aaKnown RBP13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 RHBDL3P58872 404 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 PDK4Q16654 411 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 FYB2Q5VWT5 728 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 MTHFD1LQ6UB35 978 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 TDRPQ86YL5 185 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 CYP4X1Q8N118 509 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 SLC17A8Q8NDX2 589 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 C1orf54Q8WWF1 131 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 CRAMP1Q96RY5 1269 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 EIF2AK1Q9BQI3 630 aaKnown RBP13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 TUFT1Q9NNX1 390 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 TAF1P21675 1872 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 GSTTP1A0A1W2PQM5 241 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 CLDN3O15551 220 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 EDF1O60869 148 aaKnown RBP13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 TRIM49P0CI25 452 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 TRIM49CP0CI26 452 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 AKR1B1P15121 316 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 MUTP22033 750 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 IVDP26440 423 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 NMT1P30419 496 aaKnown RBP13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 SLC16A2P36021 539 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 RPS6KA3P51812 740 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 GABPAQ06546 454 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 ZNF720Q7Z2F6 126 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 FAM178BQ8IXR5 827 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 LARGE2Q8N3Y3 721 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 LMO3Q8TAP4 145 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 CRYGNQ8WXF5 182 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 SLC7A6OSQ96CW6 309 aaPredicted RBP13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 TTC25Q96NG3 672 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 KCND2Q9NZV8 630 aa13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 ZMYND8Q9ULU4 1186 aaPredicted RBP13.2□□□□□ -0.3
CHMP2B-201ENST00000263780 AP1G2O75843 785 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 SP100P23497 879 aaPredicted RBP13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 SSR1P43307 286 aaKnown RBP13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 EIF6P56537 245 aaKnown RBP13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 WDR4P57081 412 aaKnown RBP13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 OCRLQ01968 901 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 DYNC1I2Q13409 638 aaKnown RBP13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 ZNF365Q70YC5 407 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 PSPC1Q8WXF1 523 aaKnown RBP13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 MAML1Q92585 1016 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 BICD1Q96G01 975 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 ZNF333Q96JL9 665 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 SMC6Q96SB8 1091 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 SYT15Q9BQS2 421 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 CIITAP33076 1130 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 CYP4A11Q02928 519 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 DNAJC3Q13217 504 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 SNX1Q13596 522 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 TMED2Q15363 201 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 QRICH1Q2TAL8 776 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 GRIPAP1Q4V328 841 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 C1orf186Q6ZWK4 172 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 SYCP3Q8IZU3 236 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 PPFIBP2Q8ND30 876 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 DENND1AQ8TEH3 1009 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 ZNF653Q96CK0 615 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 POP1Q99575 1024 aaKnown RBP13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 TRIM4Q9C037 500 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 WDR35Q9P2L0 1181 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 ZFP69BQ9UJL9 534 aa13.19□□□□□ -0.3
CHMP2B-201ENST00000263780 SFI1A8K8P3 1242 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 CCDC22O60826 627 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 T-ENOLP0DO92 83 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 TROVE2P10155 538 aaKnown RBP eCLIP13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 EPHB2P29323 1055 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 SREBF1P36956 1147 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 SLC1A1P43005 524 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 CDR2Q01850 454 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 ZC2HC1CQ53FD0 456 aaPredicted RBP13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 TRABD2AQ86V40 505 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 SESTD1Q86VW0 696 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 FAM81BQ96LP2 452 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 DCLK3Q9C098 648 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 FAM192AQ9GZU8 254 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 DENND2DQ9H6A0 471 aaPredicted RBP13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 EURLQ9NYK6 297 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 DLGAP2Q9P1A6 1054 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 C2CD2Q9Y426 696 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 GAKO14976 1311 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 STRCP1A6NGW2 1772 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 C2CD2LO14523 706 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 NDC80O14777 642 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 GM2AP17900 193 aa13.18□□□□□ -0.3
CHMP2B-201ENST00000263780 HHATQ5VTY9 493 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms