RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 CCT8L1PA6NM43 557 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 ARHGEF9O43307 516 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 DAB1O75553 588 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 RGS7P49802 495 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 SLC29A2Q14542 456 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 SLC18A3Q16572 532 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 TRIM60Q495X7 471 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 NAALADL2Q58DX5 795 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 CATSPER4Q7RTX7 472 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 SMAD5Q99717 465 aaKnown RBP12.73□□□□□ -0.37
SMG6-201ENST00000263073 SRGNP10124 158 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 GRM4Q14833 912 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 CEP55Q53EZ4 464 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 CYB5D1Q6P9G0 228 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 PID1Q7Z2X4 250 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 EXOC8Q8IYI6 725 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 ARHGAP18Q8N392 663 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 EPS8L3Q8TE67 593 aaKnown RBP12.73□□□□□ -0.37
SMG6-201ENST00000263073 ZFYVE19Q96K21 471 aa12.73□□□□□ -0.37
SMG6-201ENST00000263073 TDRD3Q9H7E2 651 aaKnown RBP12.73□□□□□ -0.37
SMG6-201ENST00000263073 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.73□□□□□ -0.37
SMG6-201ENST00000263073 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.73□□□□□ -0.37
SMG6-201ENST00000263073 H3BQF6 201 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 KRT33BQ14525 404 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 EZH2Q15910 746 aaKnown RBP12.72□□□□□ -0.37
SMG6-201ENST00000263073 DCAF4L1Q3SXM0 396 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 CASKIN2Q8WXE0 1202 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 HAO1Q9UJM8 370 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 UTYO14607 1347 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 CTCFP49711 727 aaPredicted RBP12.72□□□□□ -0.37
SMG6-201ENST00000263073 NUMBP49757 651 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 PLOD1Q02809 727 aaPredicted RBP12.72□□□□□ -0.37
SMG6-201ENST00000263073 ZC2HC1CQ53FD0 456 aaPredicted RBP12.72□□□□□ -0.37
SMG6-201ENST00000263073 KRT39Q6A163 491 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 KIAA1841Q6NSI8 718 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 TAS2R42Q7RTR8 314 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 CCDC33Q8N5R6 958 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 B4GALNT2Q8NHY0 566 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 VIPAS39Q9H9C1 493 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 TMEM2Q9UHN6 1383 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 STAT4Q14765 748 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 BARGINQ6ZT62 677 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 C11orf74Q86VG3 221 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 JAMLQ86YT9 394 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 GUF1Q8N442 669 aaKnown RBP12.72□□□□□ -0.37
SMG6-201ENST00000263073 GRAMD1AQ96CP6 724 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 MCEEQ96PE7 176 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 BSDC1Q9NW68 430 aaPredicted RBP12.72□□□□□ -0.37
SMG6-201ENST00000263073 POLIQ9UNA4 740 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 MYO1GB0I1T2 1018 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 ZBTB39O15060 712 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 HSD17B3P37058 310 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 ITGA8P53708 1063 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 ALCAMQ13740 583 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 DMC1Q14565 340 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 ATL2Q8NHH9 583 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 SCG3Q8WXD2 468 aaKnown RBP12.72□□□□□ -0.37
SMG6-201ENST00000263073 KCNB2Q92953 911 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 STAMBPL1Q96FJ0 436 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 LRFN2Q9ULH4 789 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 RTN2O75298 545 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 HDAC4P56524 1084 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 QRICH1Q2TAL8 776 aa12.72□□□□□ -0.37
SMG6-201ENST00000263073 RBAKQ9NYW8 714 aaPredicted RBP12.72□□□□□ -0.37
SMG6-201ENST00000263073 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.71□□□□□ -0.37
SMG6-201ENST00000263073 AKR1B1P15121 316 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 IL10P22301 178 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 ACOT2P49753 483 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 IRX1P78414 480 aaPredicted RBP12.71□□□□□ -0.37
SMG6-201ENST00000263073 CELF1Q92879 486 aaKnown RBP12.71□□□□□ -0.37
SMG6-201ENST00000263073 TRIM9Q9C026 710 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 PRDM5Q9NQX1 630 aaPredicted RBP12.71□□□□□ -0.37
SMG6-201ENST00000263073 NDFIP2Q9NV92 336 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 PARVAQ9NVD7 372 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 ZFATQ9P243 1243 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 APOL1O14791 398 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 CCND1P24385 295 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 EXOSC10Q01780 885 aaKnown RBP12.71□□□□□ -0.37
SMG6-201ENST00000263073 REXO1L1PQ8IX06 675 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 RUBCNLQ9H714 662 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 ZNF609O15014 1411 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 CLASP1Q7Z460 1538 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 AP5Z1O43299 807 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 LDHAP00338 332 aaKnown RBP12.71□□□□□ -0.37
SMG6-201ENST00000263073 MYL3P08590 195 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 KLRC1P26715 233 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 STX3Q13277 289 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 PTK7Q13308 1070 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 NYAP1Q6ZVC0 841 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 ADSSL1Q8N142 457 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 PLEKHG1Q9ULL1 1385 aa12.71□□□□□ -0.37
SMG6-201ENST00000263073 SHROOM2Q13796 1616 aa12.71□□□□□ -0.38
SMG6-201ENST00000263073 FAM47DPA6NHR8 397 aa12.71□□□□□ -0.38
SMG6-201ENST00000263073 CAND2O75155 1236 aa12.71□□□□□ -0.38
SMG6-201ENST00000263073 AP3B2Q13367 1082 aa12.71□□□□□ -0.38
SMG6-201ENST00000263073 MAPK6Q16659 721 aa12.71□□□□□ -0.38
SMG6-201ENST00000263073 LRIG3Q6UXM1 1119 aa12.71□□□□□ -0.38
SMG6-201ENST00000263073 CLEC4FQ8N1N0 589 aa12.71□□□□□ -0.38
SMG6-201ENST00000263073 AP5M1Q9H0R1 490 aa12.71□□□□□ -0.38
SMG6-201ENST00000263073 RAB6BQ9NRW1 208 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms