RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 GINS2Q9Y248 185 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 DAGLAQ9Y4D2 1042 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 MYH8P13535 1937 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 LRRD1A4D1F6 860 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 POTEFA5A3E0 1075 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 POTEIP0CG38 1075 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 ATP1A3P13637 1013 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 HOXA10P31260 410 aaPredicted RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 BFSP2Q13515 415 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 PTK6Q13882 451 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 POTEEQ6S8J3 1075 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 MTMR12Q9C0I1 747 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 ADARB2Q9NS39 739 aaKnown RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 CCDC160A6NGH7 325 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 RAD17O75943 681 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 GNA15P30679 374 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 RPL22P35268 128 aaKnown RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 FCGRTP55899 365 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 ITKQ08881 620 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 DPYDQ12882 1025 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 TIGD7Q6NT04 549 aaPredicted RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 TRMT1LQ7Z2T5 733 aaKnown RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 RNF180Q86T96 592 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 FAM133AQ8N9E0 248 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 RMDN1Q96DB5 314 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 IFT43Q96FT9 208 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 TBCBQ99426 244 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 INTS2Q9H0H0 1204 aaKnown RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 PSMD14O00487 310 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 ODC1P11926 461 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 ERCC3P19447 782 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 HSPA13P48723 471 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 CCR3P51677 355 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 SMARCB1Q12824 385 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 PCNX4Q63HM2 1172 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 TAF2Q6P1X5 1199 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 RAPH1Q70E73 1250 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 HAUS6Q7Z4H7 955 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 NUP85Q9BW27 656 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 RPAP3Q9H6T3 665 aaPredicted RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 FRMPD4Q14CM0 1322 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 SMIM23A6NLE4 172 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 PEX3P56589 373 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 POU5F1Q01860 360 aaKnown RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 ART3Q13508 389 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 HLFQ16534 295 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 TWF2Q6IBS0 349 aaKnown RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 RPAINQ86UA6 219 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 ADSSL1Q8N142 457 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 TERB1Q8NA31 727 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 TOPAZ1Q8N9V7 1692 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 MAGEB16A2A368 324 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 GPR182O15218 404 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 CDH16O75309 829 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 PDHBP11177 359 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 MAPK9P45984 424 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 RENBPP51606 427 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 SPIRE2Q8WWL2 714 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 EVA1BQ9NVM1 165 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 CNOT8Q9UFF9 292 aaKnown RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 ANAPC7Q9UJX3 599 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 RAD54BQ9Y620 910 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 CCDC78A2IDD5 438 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 MANSC4A6NHS7 340 aaPredicted RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 CYP2C18P33260 490 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 CYP4A11Q02928 519 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 NR5A1Q13285 461 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 ARHGAP15Q53QZ3 475 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 PRR5LQ6MZQ0 368 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 SYT2Q8N9I0 419 aaPredicted RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 HNRNPLLQ8WVV9 542 aaKnown RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 BCL2L12Q9HB09 334 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 FBXO2Q9UK22 296 aaPredicted RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 RBM47A0AV96 593 aaKnown RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 NR2C2P49116 596 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 EPHB1P54762 984 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 NAB2Q15742 525 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 DNAL1Q4LDG9 190 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 COBLL1Q53SF7 1204 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 ANKS3Q6ZW76 656 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 MSL3Q8N5Y2 521 aaKnown RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 PPHLN1Q8NEY8 458 aaKnown RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 C18orf8Q96DM3 657 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 EPB41L5Q9HCM4 733 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 PSD3Q9NYI0 1048 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 TUBGCP4Q9UGJ1 667 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 ZMYM5Q9UJ78 669 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 SLCO1B7G3V0H7 640 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 RARBP10826 455 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 OR6B2Q6IFH4 312 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 CLIC6Q96NY7 704 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 MRPL9Q9BYD2 267 aaKnown RBP4.55□□□□□ -1.68
VPS13C-202ENST00000261517 ENOPH1Q9UHY7 261 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 SIGLEC1Q9BZZ2 1709 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 PLSCR1O15162 318 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 COBLO75128 1261 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 PHF2O75151 1096 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 ANXA9O76027 345 aa4.55□□□□□ -1.68
VPS13C-202ENST00000261517 DCAF6Q58WW2 860 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms