RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 UBA1P22314 1058 aaKnown RBP19.06■□□□□ 0.64
SSB-201ENST00000260956 AARSP49588 968 aaKnown RBP eCLIP19.06■□□□□ 0.64
SSB-201ENST00000260956 GPC3P51654 580 aa19.06■□□□□ 0.64
SSB-201ENST00000260956 HADHBP55084 474 aaKnown RBP19.06■□□□□ 0.64
SSB-201ENST00000260956 CYP24A1Q07973 514 aa19.06■□□□□ 0.64
SSB-201ENST00000260956 EMC2Q15006 297 aa19.06■□□□□ 0.64
SSB-201ENST00000260956 IFI16Q16666 785 aaKnown RBP19.06■□□□□ 0.64
SSB-201ENST00000260956 C15orf39Q6ZRI6 1047 aa19.06■□□□□ 0.64
SSB-201ENST00000260956 NT5DC3Q86UY8 548 aa19.06■□□□□ 0.64
SSB-201ENST00000260956 ARHGEF26Q96DR7 871 aa19.06■□□□□ 0.64
SSB-201ENST00000260956 POLR3FQ9H1D9 316 aaPredicted RBP19.06■□□□□ 0.64
SSB-201ENST00000260956 SUCLA2Q9P2R7 463 aaPredicted RBP19.06■□□□□ 0.64
SSB-201ENST00000260956 GSTTP1A0A1W2PQM5 241 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 OATP04181 439 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 GTF2H1P32780 548 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 NAP1L1P55209 391 aaKnown RBP19.05■□□□□ 0.64
SSB-201ENST00000260956 CLDN10P78369 228 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 TARBP2Q15633 366 aaKnown RBP19.05■□□□□ 0.64
SSB-201ENST00000260956 ARHGAP44Q17R89 818 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 BRDTQ58F21 947 aaPredicted RBP19.05■□□□□ 0.64
SSB-201ENST00000260956 GSPT2Q8IYD1 628 aaKnown RBP19.05■□□□□ 0.64
SSB-201ENST00000260956 USP38Q8NB14 1042 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 HELQQ8TDG4 1101 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 HES6Q96HZ4 224 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 AGPAT1Q99943 283 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 NIFKQ9BYG3 293 aaKnown RBP19.05■□□□□ 0.64
SSB-201ENST00000260956 TMEM8AQ9HCN3 771 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 UBE2TQ9NPD8 197 aaPredicted RBP19.05■□□□□ 0.64
SSB-201ENST00000260956 TOPORSQ9NS56 1045 aaPredicted RBP19.05■□□□□ 0.64
SSB-201ENST00000260956 OGDHLQ9ULD0 1010 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 FARP2O94887 1054 aaPredicted RBP19.05■□□□□ 0.64
SSB-201ENST00000260956 ARIH2O95376 493 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 CCDC172P0C7W6 258 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 SMPD1P17405 629 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 ARL2P36404 184 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 PAFAH1B1P43034 410 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 GLE1Q53GS7 698 aaKnown RBP19.05■□□□□ 0.64
SSB-201ENST00000260956 TRMT1LQ7Z2T5 733 aaKnown RBP19.05■□□□□ 0.64
SSB-201ENST00000260956 RASGEF1CQ8N431 466 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 ASAP3Q8TDY4 903 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 EPS8L1Q8TE68 723 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 DIS3LQ8TF46 1054 aaKnown RBP19.05■□□□□ 0.64
SSB-201ENST00000260956 ISCUQ9H1K1 167 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 PDE11AQ9HCR9 933 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 HPCAL4Q9UM19 191 aa19.05■□□□□ 0.64
SSB-201ENST00000260956 LOC102724159A0A0B4J2E5 919 aa19.04■□□□□ 0.64
SSB-201ENST00000260956 PGK1P00558 417 aa19.04■□□□□ 0.64
SSB-201ENST00000260956 PWP2Q15269 919 aaKnown RBP19.04■□□□□ 0.64
SSB-201ENST00000260956 RPS6KA1Q15418 735 aa19.04■□□□□ 0.64
SSB-201ENST00000260956 CCDC181Q5TID7 509 aa19.04■□□□□ 0.64
SSB-201ENST00000260956 CYFIP1Q7L576 1253 aa19.04■□□□□ 0.64
SSB-201ENST00000260956 UBE2Q1Q7Z7E8 422 aa19.04■□□□□ 0.64
SSB-201ENST00000260956 ACTRT1Q8TDG2 376 aa19.04■□□□□ 0.64
SSB-201ENST00000260956 SCFD2Q8WU76 684 aa19.04■□□□□ 0.64
SSB-201ENST00000260956 PBKQ96KB5 322 aa19.04■□□□□ 0.64
SSB-201ENST00000260956 STIM2Q9P246 746 aa19.04■□□□□ 0.64
SSB-201ENST00000260956 AKR1A1P14550 325 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 GLRA2P23416 452 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 SP4Q02446 784 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 CETN1Q12798 172 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 MAP9Q49MG5 647 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 KRT39Q6A163 491 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 METTL13Q8N6R0 699 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 AFAP1L1Q8TED9 768 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 PCDHB18PQ96TA0 734 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 VTA1Q9NP79 307 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 OSGEPQ9NPF4 335 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 ZNF302Q9NR11 478 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 GDF3Q9NR23 364 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 COG5Q9UP83 839 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 GNEQ9Y223 722 aaKnown RBP19.03■□□□□ 0.64
SSB-201ENST00000260956 RBM47A0AV96 593 aaKnown RBP19.03■□□□□ 0.64
SSB-201ENST00000260956 ANKRD62A6NC57 917 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 MYADML2A6NDP7 307 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 H0YCG3 227 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 DDX3YO15523 660 aaKnown RBP19.03■□□□□ 0.64
SSB-201ENST00000260956 SORBS3O60504 671 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 BUB1BO60566 1050 aaPredicted RBP19.03■□□□□ 0.64
SSB-201ENST00000260956 EDN1P05305 212 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 SCP2P22307 547 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 MTERF2Q49AM1 385 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 NOP9Q86U38 636 aaKnown RBP19.03■□□□□ 0.64
SSB-201ENST00000260956 GPD1LQ8N335 351 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 TAS1R2Q8TE23 839 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 SELENOOQ9BVL4 669 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 HAPLN2Q9GZV7 340 aa19.03■□□□□ 0.64
SSB-201ENST00000260956 MTA2O94776 668 aa19.02■□□□□ 0.63
SSB-201ENST00000260956 ABCD1P33897 745 aa19.02■□□□□ 0.63
SSB-201ENST00000260956 WNT7BP56706 349 aa19.02■□□□□ 0.63
SSB-201ENST00000260956 PRPF4BQ13523 1007 aaKnown RBP19.02■□□□□ 0.63
SSB-201ENST00000260956 CCDC62Q6P9F0 684 aa19.02■□□□□ 0.63
SSB-201ENST00000260956 SEPT14Q6ZU15 432 aa19.02■□□□□ 0.63
SSB-201ENST00000260956 SLC35G2Q8TBE7 412 aa19.02■□□□□ 0.63
SSB-201ENST00000260956 COPS5Q92905 334 aa19.02■□□□□ 0.63
SSB-201ENST00000260956 POP1Q99575 1024 aaKnown RBP19.02■□□□□ 0.63
SSB-201ENST00000260956 THAP2Q9H0W7 228 aa19.02■□□□□ 0.63
SSB-201ENST00000260956 TTC7AQ9ULT0 858 aaPredicted RBP19.02■□□□□ 0.63
SSB-201ENST00000260956 RANBP2P49792 3224 aaKnown RBP19.01■□□□□ 0.63
SSB-201ENST00000260956 KCNK3O14649 394 aa19.01■□□□□ 0.63
SSB-201ENST00000260956 ADAMTS4O75173 837 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms