RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 PLA2G4FQ68DD2 849 aa18.22■□□□□ 0.51
FOXA1-201ENST00000250448 C1orf186Q6ZWK4 172 aa18.22■□□□□ 0.51
FOXA1-201ENST00000250448 KSR1Q8IVT5 923 aa18.22■□□□□ 0.51
FOXA1-201ENST00000250448 C2orf69Q8N8R5 385 aa18.22■□□□□ 0.51
FOXA1-201ENST00000250448 CCDC197Q8NCU1 140 aa18.22■□□□□ 0.51
FOXA1-201ENST00000250448 PABPC3Q9H361 631 aaKnown RBP18.22■□□□□ 0.51
FOXA1-201ENST00000250448 DNAJC12Q9UKB3 198 aa18.22■□□□□ 0.51
FOXA1-201ENST00000250448 CHN1P15882 459 aa18.22■□□□□ 0.51
FOXA1-201ENST00000250448 ZNF211Q13398 564 aaPredicted RBP18.22■□□□□ 0.51
FOXA1-201ENST00000250448 WLSQ5T9L3 541 aa18.22■□□□□ 0.51
FOXA1-201ENST00000250448 JAMLQ86YT9 394 aa18.22■□□□□ 0.51
FOXA1-201ENST00000250448 GPRASP2Q96D09 838 aa18.22■□□□□ 0.51
FOXA1-201ENST00000250448 SELENOSQ9BQE4 189 aa18.22■□□□□ 0.51
FOXA1-201ENST00000250448 FBXO40Q9UH90 709 aa18.22■□□□□ 0.51
FOXA1-201ENST00000250448 TPX2Q9ULW0 747 aaKnown RBP18.22■□□□□ 0.51
FOXA1-201ENST00000250448 ARHGEF35A5YM69 484 aa18.21■□□□□ 0.51
FOXA1-201ENST00000250448 PSMC2P35998 433 aaKnown RBP18.21■□□□□ 0.51
FOXA1-201ENST00000250448 STXBP2Q15833 593 aa18.21■□□□□ 0.51
FOXA1-201ENST00000250448 FAM228AQ86W67 206 aa18.21■□□□□ 0.51
FOXA1-201ENST00000250448 GLG1Q92896 1179 aa18.21■□□□□ 0.51
FOXA1-201ENST00000250448 PGM2Q96G03 612 aa18.21■□□□□ 0.51
FOXA1-201ENST00000250448 OLFML3Q9NRN5 406 aa18.21■□□□□ 0.51
FOXA1-201ENST00000250448 MMEP08473 750 aa18.21■□□□□ 0.51
FOXA1-201ENST00000250448 GAP43P17677 238 aa18.21■□□□□ 0.51
FOXA1-201ENST00000250448 QARSP47897 775 aaKnown RBP18.21■□□□□ 0.51
FOXA1-201ENST00000250448 FMO5P49326 533 aa18.21■□□□□ 0.51
FOXA1-201ENST00000250448 ZDHHC24Q6UX98 284 aa18.21■□□□□ 0.51
FOXA1-201ENST00000250448 CYFIP1Q7L576 1253 aa18.21■□□□□ 0.51
FOXA1-201ENST00000250448 GIMAP7Q8NHV1 300 aa18.21■□□□□ 0.51
FOXA1-201ENST00000250448 ZNF317Q96PQ6 595 aaPredicted RBP18.21■□□□□ 0.51
FOXA1-201ENST00000250448 RASAL2Q9UJF2 1139 aa18.21■□□□□ 0.51
FOXA1-201ENST00000250448 SNX24Q9Y343 169 aa18.21■□□□□ 0.51
FOXA1-201ENST00000250448 PFASO15067 1338 aa18.21■□□□□ 0.51
FOXA1-201ENST00000250448 NMT1P30419 496 aaKnown RBP18.2■□□□□ 0.5
FOXA1-201ENST00000250448 MMP13P45452 471 aa18.2■□□□□ 0.5
FOXA1-201ENST00000250448 MYCT1Q8N699 235 aa18.2■□□□□ 0.5
FOXA1-201ENST00000250448 ATXN2LQ8WWM7 1075 aaKnown RBP18.2■□□□□ 0.5
FOXA1-201ENST00000250448 RNF25Q96BH1 459 aaPredicted RBP18.2■□□□□ 0.5
FOXA1-201ENST00000250448 GPR88Q9GZN0 384 aa18.2■□□□□ 0.5
FOXA1-201ENST00000250448 CCT8L1PA6NM43 557 aa18.2■□□□□ 0.5
FOXA1-201ENST00000250448 CCDC169A6NNP5 214 aa18.2■□□□□ 0.5
FOXA1-201ENST00000250448 WDR64B1ANS9 1081 aa18.2■□□□□ 0.5
FOXA1-201ENST00000250448 KIAA0391O15091 583 aaKnown RBP18.2■□□□□ 0.5
FOXA1-201ENST00000250448 EIF3DO15371 548 aaKnown RBP eCLIP18.2■□□□□ 0.5
FOXA1-201ENST00000250448 FAM13AO94988 1023 aa18.2■□□□□ 0.5
FOXA1-201ENST00000250448 PLTPP55058 493 aa18.2■□□□□ 0.5
FOXA1-201ENST00000250448 MAPK7Q13164 816 aa18.2■□□□□ 0.5
FOXA1-201ENST00000250448 CLUL1Q15846 466 aa18.2■□□□□ 0.5
FOXA1-201ENST00000250448 XRRA1Q6P2D8 792 aa18.2■□□□□ 0.5
FOXA1-201ENST00000250448 RNF217Q8TC41 542 aa18.2■□□□□ 0.5
FOXA1-201ENST00000250448 MAGEC3Q8TD91 643 aa18.2■□□□□ 0.5
FOXA1-201ENST00000250448 ALG3Q92685 438 aa18.2■□□□□ 0.5
FOXA1-201ENST00000250448 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.2■□□□□ 0.5
FOXA1-201ENST00000250448 ZC2HC1CQ53FD0 456 aaPredicted RBP18.2■□□□□ 0.5
FOXA1-201ENST00000250448 PADI6Q6TGC4 694 aa18.2■□□□□ 0.5
FOXA1-201ENST00000250448 FBXO25Q8TCJ0 367 aa18.2■□□□□ 0.5
FOXA1-201ENST00000250448 THAP2Q9H0W7 228 aa18.2■□□□□ 0.5
FOXA1-201ENST00000250448 AZI2Q9H6S1 392 aa18.2■□□□□ 0.5
FOXA1-201ENST00000250448 SEPT11Q9NVA2 429 aaKnown RBP18.2■□□□□ 0.5
FOXA1-201ENST00000250448 GABBR1Q9UBS5 961 aa18.2■□□□□ 0.5
FOXA1-201ENST00000250448 MCM3APO60318 1980 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 KRT13P13646 458 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 TNFAIP3P21580 790 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 YWHABP31946 246 aaKnown RBP18.19■□□□□ 0.5
FOXA1-201ENST00000250448 NFIL3Q16649 462 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 SWSAP1Q6NVH7 229 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 DNERQ8NFT8 737 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 FGD4Q96M96 766 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 SCLT1Q96NL6 688 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 MMP19Q99542 508 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 PTPN18Q99952 460 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 INTS2Q9H0H0 1204 aaKnown RBP18.19■□□□□ 0.5
FOXA1-201ENST00000250448 ADAM7Q9H2U9 754 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 JPH1Q9HDC5 661 aaPredicted RBP18.19■□□□□ 0.5
FOXA1-201ENST00000250448 TAS2R14Q9NYV8 317 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 TLDC2A0PJX2 215 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 FAM170AA1A519 330 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 SPATA31C2B4DYI2 1134 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 PHF2O75151 1096 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 CETPP11597 493 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 DRG2P55039 364 aaKnown RBP18.19■□□□□ 0.5
FOXA1-201ENST00000250448 HUNKP57058 714 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 KRT76Q01546 638 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 GNPTABQ3T906 1256 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 ANKS4BQ8N8V4 417 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 MKNK1Q9BUB5 465 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 GRHL1Q9NZI5 618 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 COG5Q9UP83 839 aa18.19■□□□□ 0.5
FOXA1-201ENST00000250448 SYNGAP1Q96PV0 1343 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 SMIM23A6NLE4 172 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 RGS16O15492 202 aaPredicted RBP18.18■□□□□ 0.5
FOXA1-201ENST00000250448 ASAP2O43150 1006 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 HIP1RO75146 1068 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 PTGIRP43119 386 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 RARRES1P49788 294 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 KCTD2Q14681 263 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 CEP57Q86XR8 500 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 FMNL3Q8IVF7 1028 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 GPRC5CQ9NQ84 441 aa18.18■□□□□ 0.5
FOXA1-201ENST00000250448 SLC9A2Q9UBY0 812 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms