RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 MKRN4PQ13434 485 aaPredicted RBP18.97■□□□□ 0.63
GCDH-201ENST00000222214 BIRC3Q13489 604 aa18.97■□□□□ 0.63
GCDH-201ENST00000222214 GLIPR1L2Q4G1C9 344 aa18.97■□□□□ 0.63
GCDH-201ENST00000222214 TDRD10Q5VZ19 366 aaKnown RBP18.97■□□□□ 0.63
GCDH-201ENST00000222214 TAPT1Q6NXT6 567 aa18.97■□□□□ 0.63
GCDH-201ENST00000222214 MAMDC4Q6UXC1 1216 aa18.97■□□□□ 0.63
GCDH-201ENST00000222214 SLC47A2Q86VL8 602 aa18.97■□□□□ 0.63
GCDH-201ENST00000222214 DNAAF5Q86Y56 855 aa18.97■□□□□ 0.63
GCDH-201ENST00000222214 PALB2Q86YC2 1186 aa18.97■□□□□ 0.63
GCDH-201ENST00000222214 USP38Q8NB14 1042 aa18.97■□□□□ 0.63
GCDH-201ENST00000222214 PPTC7Q8NI37 304 aa18.97■□□□□ 0.63
GCDH-201ENST00000222214 COPS5Q92905 334 aa18.97■□□□□ 0.63
GCDH-201ENST00000222214 ACO2Q99798 780 aaKnown RBP18.97■□□□□ 0.63
GCDH-201ENST00000222214 NFKBIZQ9BYH8 718 aa18.97■□□□□ 0.63
GCDH-201ENST00000222214 ACBD3Q9H3P7 528 aa18.97■□□□□ 0.63
GCDH-201ENST00000222214 PDGFCQ9NRA1 345 aa18.97■□□□□ 0.63
GCDH-201ENST00000222214 TAS2R14Q9NYV8 317 aa18.97■□□□□ 0.63
GCDH-201ENST00000222214 BUB1BO60566 1050 aaPredicted RBP18.96■□□□□ 0.63
GCDH-201ENST00000222214 SASH3O75995 380 aa18.96■□□□□ 0.63
GCDH-201ENST00000222214 MTA2O94776 668 aa18.96■□□□□ 0.63
GCDH-201ENST00000222214 TNNC1P63316 161 aa18.96■□□□□ 0.63
GCDH-201ENST00000222214 FMO1Q01740 532 aa18.96■□□□□ 0.63
GCDH-201ENST00000222214 MCL1Q07820 350 aa18.96■□□□□ 0.63
GCDH-201ENST00000222214 C11orf63Q6NUN7 778 aa18.96■□□□□ 0.63
GCDH-201ENST00000222214 TATDN2Q93075 761 aa18.96■□□□□ 0.63
GCDH-201ENST00000222214 MS4A14Q96JA4 679 aa18.96■□□□□ 0.63
GCDH-201ENST00000222214 OSGEPQ9NPF4 335 aa18.96■□□□□ 0.63
GCDH-201ENST00000222214 RBM12Q9NTZ6 932 aaKnown RBP18.96■□□□□ 0.63
GCDH-201ENST00000222214 RNF216Q9NWF9 866 aaPredicted RBP18.96■□□□□ 0.63
GCDH-201ENST00000222214 CNTNAP2Q9UHC6 1331 aa18.96■□□□□ 0.63
GCDH-201ENST00000222214 COL1A2P08123 1366 aa18.96■□□□□ 0.63
GCDH-201ENST00000222214 SRCAPQ6ZRS2 3230 aa18.96■□□□□ 0.63
GCDH-201ENST00000222214 OGTO15294 1046 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 MAGEB2O15479 319 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 POTEJP0CG39 1038 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 SRGAP2CP0DJJ0 459 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 TNFRSF8P28908 595 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 PLA2G4AP47712 749 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 CCNI2Q6ZMN8 369 aaPredicted RBP18.95■□□□□ 0.62
GCDH-201ENST00000222214 WDR49Q8IV35 697 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 TCHPQ9BT92 498 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 LRRC1Q9BTT6 524 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 STIM2Q9P246 746 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 PCDHB2Q9Y5E7 798 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 PGRMC1O00264 195 aaKnown RBP18.95■□□□□ 0.62
GCDH-201ENST00000222214 ACKR2O00590 384 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 EDN1P05305 212 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 KRT5P13647 590 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 DNA2P51530 1060 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 FAM110CQ1W6H9 321 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 SPRYD7Q5W111 196 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 EFCAB12Q6NXP0 572 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 TSHZ1Q6ZSZ6 1077 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 RHPN2Q8IUC4 686 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 RASGEF1CQ8N431 466 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 LRRC71Q8N4P6 559 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 ARHGEF26Q96DR7 871 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.95■□□□□ 0.625e-7■■■□□ 15.5
GCDH-201ENST00000222214 IMPG2Q9BZV3 1241 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 VIPAS39Q9H9C1 493 aa18.95■□□□□ 0.62
GCDH-201ENST00000222214 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.95■□□□□ 0.62
GCDH-201ENST00000222214 TTC7AQ9ULT0 858 aaPredicted RBP18.95■□□□□ 0.62
GCDH-201ENST00000222214 MIF4GDA9UHW6 222 aaKnown RBP18.94■□□□□ 0.62
GCDH-201ENST00000222214 LGALS2P05162 132 aa18.94■□□□□ 0.62
GCDH-201ENST00000222214 MMEP08473 750 aa18.94■□□□□ 0.62
GCDH-201ENST00000222214 GRB14Q14449 540 aa18.94■□□□□ 0.62
GCDH-201ENST00000222214 METTL13Q8N6R0 699 aa18.94■□□□□ 0.62
GCDH-201ENST00000222214 DDX1Q92499 740 aaKnown RBP18.94■□□□□ 0.62
GCDH-201ENST00000222214 PCDHB18PQ96TA0 734 aa18.94■□□□□ 0.62
GCDH-201ENST00000222214 PI4K2AQ9BTU6 479 aa18.94■□□□□ 0.62
GCDH-201ENST00000222214 FZD8Q9H461 694 aa18.94■□□□□ 0.62
GCDH-201ENST00000222214 EHD2Q9NZN4 543 aa18.94■□□□□ 0.62
GCDH-201ENST00000222214 CTTNBP2NLQ9P2B4 639 aa18.94■□□□□ 0.62
GCDH-201ENST00000222214 UVRAGQ9P2Y5 699 aa18.94■□□□□ 0.62
GCDH-201ENST00000222214 TMEM59LQ9UK28 342 aa18.94■□□□□ 0.62
GCDH-201ENST00000222214 GTF3C4Q9UKN8 822 aa18.94■□□□□ 0.62
GCDH-201ENST00000222214 CCDC188H7C350 402 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 FAM189A1O60320 539 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 VNN1O95497 513 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 PROZP22891 400 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 MAPK4P31152 587 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 PTENP60484 403 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 TAF3Q5VWG9 929 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 PPP1R2P3Q6NXS1 205 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 MPZL3Q6UWV2 235 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 UBXN6Q9BZV1 441 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 CARD9Q9H257 536 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.93■□□□□ 0.628e-7■■■■■ 298.1
GCDH-201ENST00000222214 CEP104O60308 925 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 PHACTR2O75167 634 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 PPFIA4O75335 1185 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 C22orf31O95567 290 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 CUL2Q13617 745 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 CASP8Q14790 479 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 ZBTB41Q5SVQ8 909 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 ACAD10Q6JQN1 1059 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 GPR142Q7Z601 462 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 DPP9Q86TI2 863 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 TRIM11Q96F44 468 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 RPS6KC1Q96S38 1066 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms