RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 RNF103-CHMP3A0A140T963 221 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 TRIM49BA6NDI0 452 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 USP17L15C9J2P7 530 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 USP17L13C9JLJ4 530 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 USP17L11C9JVI0 530 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 USP17L18D6R9N7 530 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 USP17L22D6RA61 530 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 USP17L17D6RBQ6 530 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 USP17L19D6RCP7 530 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 USP17L20D6RJB6 530 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 KLHL2O95198 593 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 USP17L24Q0WX57 530 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 SGSM1Q2NKQ1 1148 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 USP17L6PQ6QN14 398 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 C16orf89Q6UX73 402 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 PCYOX1LQ8NBM8 494 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 CDY2AQ9Y6F7 541 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 CDY1Q9Y6F8 540 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 FAM47DPA6NHR8 397 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 ZNF197O14709 1029 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 ARSEP51690 589 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 CAPRIN1Q14444 709 aaKnown RBP13.24□□□□□ -0.29
LMCD1-201ENST00000157600 HNRNPLLQ8WVV9 542 aaKnown RBP13.24□□□□□ -0.29
LMCD1-201ENST00000157600 MMTAG2Q9BU76 263 aaKnown RBP13.24□□□□□ -0.29
LMCD1-201ENST00000157600 VPS33BQ9H267 617 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 C16orf96A6NNT2 1141 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 CD4P01730 458 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 XKR3Q5GH77 459 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 PCDHGB4Q9UN71 923 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 CD163L1Q9NR16 1453 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 CCDC78A2IDD5 438 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 ANP32DO95626 131 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 FMO5P49326 533 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 HDLBPQ00341 1268 aaKnown RBP13.24□□□□□ -0.29
LMCD1-201ENST00000157600 DPYDQ12882 1025 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 NAB2Q15742 525 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 STRIP1Q5VSL9 837 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 PHF20Q9BVI0 1012 aa13.24□□□□□ -0.29
LMCD1-201ENST00000157600 MARK3P27448 753 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 CDH6P55285 790 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 CENPCQ03188 943 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 VEPH1Q14D04 833 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 SHC4Q6S5L8 630 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 GABBR1Q9UBS5 961 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 FBXO2Q9UK22 296 aaPredicted RBP13.23□□□□□ -0.29
LMCD1-201ENST00000157600 RASSF10A6NK89 507 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 H0Y626 953 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 PPP1R37O75864 691 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 TRIM16O95361 564 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 HNRNPH2P55795 449 aaKnown RBP13.23□□□□□ -0.29
LMCD1-201ENST00000157600 C12orf60Q5U649 245 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 CRAMP1Q96RY5 1269 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 ADCY1Q08828 1119 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 Q3C1V9 767 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 ANGPTL8Q6UXH0 198 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 MRPL1Q9BYD6 325 aaKnown RBP13.23□□□□□ -0.29
LMCD1-201ENST00000157600 CDV3Q9UKY7 258 aaKnown RBP13.23□□□□□ -0.29
LMCD1-201ENST00000157600 APOA1P02647 267 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 CYP19A1P11511 503 aaPredicted RBP13.23□□□□□ -0.29
LMCD1-201ENST00000157600 PRDX5P30044 214 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 POLE2P56282 527 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 KRT17Q04695 432 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 PPM1NQ8N819 430 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 SPATA33Q96N06 139 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 KCNK16Q96T55 309 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 MYO5BQ9ULV0 1848 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 SLC16A4O15374 487 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 ARHGEF9O43307 516 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 FXR2P51116 673 aaKnown RBP eCLIP13.23□□□□□ -0.29
LMCD1-201ENST00000157600 RBP5P82980 135 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 GRIN1Q05586 938 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 RHPN2Q8IUC4 686 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 LRRC43Q8N309 656 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 HPS3Q969F9 1004 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 TEX13BQ9BXU2 312 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 FER1L4A9Z1Z3 1794 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 ANGPT2O15123 496 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 MEFVO15553 781 aaPredicted RBP13.23□□□□□ -0.29
LMCD1-201ENST00000157600 KRT8P05787 483 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 HLFQ16534 295 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 VPS11Q9H270 941 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 RSAD1Q9HA92 442 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 KLC4Q9NSK0 619 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 MTO1Q9Y2Z2 717 aaKnown RBP13.23□□□□□ -0.29
LMCD1-201ENST00000157600 USP13Q92995 863 aaPredicted RBP13.23□□□□□ -0.29
LMCD1-201ENST00000157600 DYDC2Q96IM9 177 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 TJP2Q9UDY2 1190 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 FIS1Q9Y3D6 152 aa13.23□□□□□ -0.29
LMCD1-201ENST00000157600 HSPA13P48723 471 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 THNSL1Q8IYQ7 743 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 MMP19Q99542 508 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 PCDHB2Q9Y5E7 798 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 MYH11P35749 1972 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 ACTR2P61160 394 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 TMED1Q13445 227 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 MFSD14CQ5VZR4 134 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 WRNIP1Q96S55 665 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 ECT2Q9H8V3 914 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 ADA2Q9NZK5 511 aa13.22□□□□□ -0.29
LMCD1-201ENST00000157600 PKD2L2Q9NZM6 624 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms