RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 MOSPD2Q8NHP6 518 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 HOXC10Q9NYD6 342 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 DLC1Q96QB1 1528 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 ENO4A6NNW6 628 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 HNMTP50135 292 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 LRRC8DQ7L1W4 858 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 RASSF3Q86WH2 238 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 LCORLQ8N3X6 602 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 ABTB1Q969K4 478 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-201ENST00000011700 FAM210AQ96ND0 272 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 MTMR12Q9C0I1 747 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 SMARCAD1Q9H4L7 1026 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 HMG20AQ9NP66 347 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 AASDHPPTQ9NRN7 309 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 CAB39Q9Y376 341 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-201ENST00000011700 MARK3P27448 753 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 DDIT3P35638 169 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 GUCA1AP43080 201 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-201ENST00000011700 DSG1Q02413 1049 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 DMC1Q14565 340 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 TMEM179Q6ZVK1 233 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 KRT74Q7RTS7 529 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 NLRP10Q86W26 655 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 CAMK1DQ8IU85 385 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 TEKT4Q8WW24 435 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 RNASE9P60153 205 aaKnown RBP6.39□□□□□ -1.39
VPS13D-201ENST00000011700 MTMR6Q9Y217 621 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 A0A1W2PQJ5 194 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 LDOC1O95751 146 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-201ENST00000011700 GUCA1CO95843 209 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 HLA-DPA1P20036 260 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 STAT5AP42229 794 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 STAT5BP51692 787 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 ARFIP2P53365 341 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 RAB15P59190 212 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 PRAMEP78395 509 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 ROR1Q01973 937 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 TGM3Q08188 693 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 DUOXA2Q1HG44 320 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 EDRF1Q3B7T1 1238 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 TTLL9Q3SXZ7 439 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 USH1GQ495M9 461 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 HP1BP3Q5SSJ5 553 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-201ENST00000011700 GALNT18Q6P9A2 607 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 FAM45AQ8TCE6 357 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 CLMNQ96JQ2 1002 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 CARD14Q9BXL6 1004 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 NRDE2Q9H7Z3 1164 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 ATAD3AQ9NVI7 634 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 AKAP7Q9P0M2 348 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-201ENST00000011700 ZNF608Q9ULD9 1512 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-201ENST00000011700 VPS4BO75351 444 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 UQCRBP14927 111 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 PDIA3P30101 505 aaKnown RBP6.39□□□□□ -1.39
VPS13D-201ENST00000011700 PDCLQ13371 301 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 PMF1Q6P1K2 205 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 NEK5Q6P3R8 708 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 TRMT1LQ7Z2T5 733 aaKnown RBP6.39□□□□□ -1.39
VPS13D-201ENST00000011700 PHC3Q8NDX5 983 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 USP28Q96RU2 1077 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 DYRK4Q9NR20 520 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 SLC9A2Q9UBY0 812 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 KIAA0100Q14667 2235 aaKnown RBP6.39□□□□□ -1.39
VPS13D-201ENST00000011700 CDK5RAP2Q96SN8 1893 aa6.39□□□□□ -1.39
VPS13D-201ENST00000011700 FGAP02671 866 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 IMPDH2P12268 514 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 MAPK9P45984 424 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 CLK1P49759 484 aaKnown RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 TUBA4AP68366 448 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 MMRN1Q13201 1228 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 TRMT5Q32P41 509 aaKnown RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 SLC44A4Q53GD3 710 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 TRAF7Q6Q0C0 670 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 C16orf62Q7Z3J2 963 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 PPHLN1Q8NEY8 458 aaKnown RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 STAMQ92783 540 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 SUFUQ9UMX1 484 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 AKT3Q9Y243 479 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 USP15Q9Y4E8 981 aaPredicted RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 ZNF804BA4D1E1 1349 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 IL18RAPO95256 599 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 FBXW4P57775 412 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 ZNF699Q32M78 642 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 SLC35F6Q8N357 371 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 RTL3Q8N8U3 475 aaKnown RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 DDHD1Q8NEL9 900 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 HDAC7Q8WUI4 952 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 FAF2Q96CS3 445 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 OSBPL8Q9BZF1 889 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 RANBP17Q9H2T7 1088 aaKnown RBP6.38□□□□□ -1.39
VPS13D-201ENST00000011700 KLHL31Q9H511 634 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 DCLRE1BQ9H816 532 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 EMILIN3Q9NT22 766 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 ADAM22Q9P0K1 906 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 APC2O95996 2303 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 EIF3HO15372 352 aaKnown RBP eCLIP6.38□□□□□ -1.397e-7■■■■□ 25.4
VPS13D-201ENST00000011700 PRMT3O60678 531 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 CLCN6P51797 869 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 PCNX4Q63HM2 1172 aa6.38□□□□□ -1.39
VPS13D-201ENST00000011700 ANGPTL8Q6UXH0 198 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms