RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 TbckQ8BM85 762 aa16.78■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 SgczQ8BX51 311 aa16.78■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Uroc1Q8VC12 676 aa16.78■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Haus2Q9CQS9 234 aa16.78■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Ppp1r3gQ9CW07 347 aa16.78■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Polr2dQ9D7M8 142 aaKnown RBP16.78■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 TnmdQ9EP64 317 aa16.78■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Cacng4Q9JJV4 327 aa16.78■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Cnga3Q9JJZ8 631 aa16.78■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Kcnh3Q9WVJ0 1095 aa16.78■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Gm7168A0AUV4 508 aa16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Itgb1P09055 798 aaKnown RBP16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 FechP22315 420 aaKnown RBP16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Hoxd8P23463 289 aa16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Usp10P52479 792 aaKnown RBP16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Ndufs6P52503 116 aa16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Ptcd3Q14C51 685 aaKnown RBP16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Tmc5Q32NZ6 967 aa16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Ube2zQ3UE37 356 aa16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Znf827Q505G8 1078 aa16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Sun3Q5SS91 320 aa16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 SkiQ60698 725 aa16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Atp1a3Q6PIC6 1013 aa16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Klhl17Q6TDP3 640 aa16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Rec8Q8C5S7 591 aa16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 E2f4Q8R0K9 410 aa16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Tbc1d22aQ8R5A6 516 aa16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Pcdhb19Q91Y01 801 aa16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Slc13a3Q91Y63 600 aa16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Them5Q9CQJ0 248 aa16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Chst7Q9EP78 484 aa16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Extl1Q9JKV7 669 aa16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 PollQ9QXE2 573 aaKnown RBP16.77■□□□□ 0.28
Hmgb1-208ENSMUST00000139443 Catsper2A2ARP9 588 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Tpm3-rs7D3Z2H9 248 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Olfr743L7N1Y2 311 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 FasP25446 327 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Epb41l4aP52963 686 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Oaz1P54369 227 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Plk1Q07832 603 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Arhgef16Q3U5C8 713 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Fam196aQ3USH1 422 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Ssr4Q62186 172 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Olfr412Q7TRW7 312 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Fgd5Q80UZ0 1219 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 RimklbQ80WS1 387 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Clic6Q8BHB9 596 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Igdcc3Q8BQC3 813 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Gpr61Q8C010 449 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Trim9Q8C7M3 817 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Ago2Q8CJG0 860 aaKnown RBP16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Gas2l1Q8JZP9 678 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Fam129bQ8R1F1 749 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Vmn1r213Q8R278 384 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Hps3Q91VB4 1002 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Tpcn1Q9EQJ0 817 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Padi3Q9Z184 664 aa16.76■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Cntnap5aQ0V8T9 1304 aa16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Myo16Q5DU14 1919 aa16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Grem1O70326 184 aa16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Ppp3ccP48455 513 aa16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Scarf2P59222 833 aa16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Zdhhc9P59268 364 aa16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Rbm20Q3UQS8 1199 aaKnown RBP16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Cd37Q61470 281 aa16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Rrp12Q6P5B0 1295 aaKnown RBP16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 TbataQ7TSD4 393 aa16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Rbm41Q8JZV4 413 aa16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Rpp40Q8R1F9 363 aa16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Olfr345Q8VGK4 311 aa16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Zmat2Q9CPW7 199 aa16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Lgals2Q9CQW5 130 aa16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 PtmsQ9D0J8 101 aaKnown RBP16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Q9D1F3 157 aa16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Q9D2Q3 444 aa16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Zfyve19Q9DAZ9 389 aa16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Gm7173A0A0G2JEB6 3132 aa16.75■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 MybP06876 636 aa16.74■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Pla2g4aP47713 748 aa16.74■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 AdprhP54923 362 aa16.74■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Nr2e1Q64104 385 aa16.74■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 EfsQ64355 560 aa16.74■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Cpa4Q6P8K8 420 aa16.74■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Mindy1Q76LS9 468 aa16.74■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Zbtb24Q80X44 710 aa16.74■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Rnf168Q80XJ2 565 aa16.74■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 GnsQ8BFR4 544 aa16.74■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Ttc26Q8BS45 554 aa16.74■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Csgalnact2Q8C1F4 542 aa16.74■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Pin4Q9CWW6 131 aa16.74■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Syde1Q9DBZ9 737 aa16.74■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Cep295Q8BQ48 2412 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Gm43638A0A0J9YU36 694 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Olfr663A0A1B0GSI9 319 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Klhdc7aA2APT9 773 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Plcb2A3KGF7 1181 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Olfr456B2RT27 312 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Acad12D3Z7X0 555 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Wnt7bP28047 349 aa16.73■□□□□ 0.27
Hmgb1-208ENSMUST00000139443 Gdf6P43028 454 aa16.73■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 52 ms