RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 Ankrd27Q3UMR0 1048 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 P2rx3Q3UR32 397 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Fam228bQ497Q6 232 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Tcf12Q61286 706 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Insm1Q63ZV0 521 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Ephx4Q6IE26 359 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Cfap206Q6PE87 622 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Prl3a1Q78Y73 227 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Lrrc1Q80VQ1 524 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Aldh5a1Q8BWF0 523 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Tmem62Q8BXJ9 643 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Dis3lQ8C0S1 1053 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Thop1Q8C1A5 687 aaKnown RBP6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 VcpkmtQ8C436 228 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Usp27Q8CEG8 438 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Bag5Q8CI32 447 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Ago3Q8CJF9 860 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Ero1aQ8R180 464 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Gimap7Q8R379 293 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Cd248Q91V98 765 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Taf5lQ91WQ5 589 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Pcdha1Q91Y21 948 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Ugp2Q91ZJ5 508 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Riok1Q922Q2 567 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Aipl1Q924K1 328 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Tspan1Q99J59 240 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Ska1Q9CPV1 254 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Ppil4Q9CXG3 492 aaKnown RBP6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Cuedc2Q9CXX9 284 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Apobec2Q9WV35 224 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Cntnap5cQ0V8T7 1305 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 InsrrQ9WTL4 1300 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Kiaa0232Q80U59 1396 aaKnown RBP6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Pcna-ps2A0A140T8V5 261 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Cylc2B1AWN8 422 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Gm4787B2RUD9 748 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Pold2O35654 469 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Atp2a2O55143 1044 aaKnown RBP6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 DgkaO88673 730 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Adh1P00329 375 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Fgl2P12804 432 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 GhrP16882 650 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Igfbp4P47879 254 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Ccdc174Q3U155 467 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Yipf3Q3UDR8 347 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Eml4Q3UMY5 988 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Kdm7aQ3UWM4 940 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 6430531B16RikQ3V2J1 307 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Stxbp3Q60770 592 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Orc2Q60862 576 aaKnown RBP6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Kpna1Q60960 538 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Ddx19aQ61655 478 aaKnown RBP6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Ptpn14Q62130 1189 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Hdac4Q6NZM9 1076 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Usp17leQ7M764 540 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Lrsam1Q80ZI6 727 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Sptlc3Q8BG54 563 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Hpcal4Q8BGZ1 191 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Ano10Q8BH79 659 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Gtf3c4Q8BMQ2 817 aaKnown RBP6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 AsphQ8BSY0 741 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Trim14Q8BVW3 440 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Gpc3Q8CFZ4 579 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Slc26a8Q8R0C3 999 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Plppr2Q8VCY8 343 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Cavin3Q91VJ2 260 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Ces1fQ91WU0 561 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Tcf7l2Q924A0 459 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Q9D4A5 307 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Xpo4Q9ESJ0 1151 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Mapk7Q9WVS8 806 aa6.92□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Atp8b3Q6UQ17 1335 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Proca1B0QZF7 307 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Kif28pD3YXS5 1028 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Ttc17E9PVB5 1198 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Dthd1E9PZX1 795 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 1600015I10RikE9Q745 711 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Serpinb9eO08806 377 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Hsd3b6O35469 373 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Ptpn20O55082 426 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Slc16a2O70324 545 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Myo1aO88329 1043 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Hoxa7P02830 229 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Gna14P30677 355 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Cd9P40240 226 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Cage1Q5IR70 849 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Arhgap44Q5SSM3 814 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 ScinQ60604 715 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Tnpo3Q6P2B1 923 aaKnown RBP6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Rnf220Q6PDX6 566 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Naa35Q6PHQ8 725 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Zbtb24Q80X44 710 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 PdhxQ8BKZ9 501 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Psd4Q8BLR5 1005 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Nox1Q8CIZ9 591 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Nup58Q8R332 587 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Rpap2Q8VC34 614 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Dhx58Q99J87 678 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Gmpr2Q99L27 348 aa6.91□□□□□ -1.3
Ccdc38-203ENSMUST00000132214 Snx2Q9CWK8 519 aa6.91□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 61.5 ms