RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Bank1Q80VH0 783 aa13.12□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Thoc1Q8R3N6 657 aaKnown RBP13.12□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Mrps5Q99N87 432 aaKnown RBP13.12□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Wnt7bP28047 349 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Ptprn2P80560 1001 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 RelaQ04207 549 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Agbl1Q09M05 972 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Azin2Q8BVM4 459 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Lca5lQ8C0X0 741 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Pkn3Q8K045 878 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Klhl36Q8R124 613 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Usp26Q99MX1 835 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Cfap57Q9D180 1249 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Cep72Q9D3R3 646 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Cyp2s1Q9DBX6 501 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Uchl3Q9JKB1 230 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Uts2Q9QZQ3 123 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Apba1B2RUJ5 842 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Gm10110D3Z5M2 615 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Sclt1G5E861 688 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 PrkceP16054 737 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Usp4P35123 962 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Tas2r134Q7TQB0 298 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Ttc8Q8VD72 515 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Chn1Q91V57 459 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 4933428M09RikQ9D3X3 192 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Rsrc1Q9DBU6 334 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 IydQ9DCX8 285 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Krt71Q9R0H5 524 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Zgrf1Q0VGT4 1863 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Taf1Q80UV9 1891 aa13.11□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Plcg1Q62077 1302 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Syt2P46097 422 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 HnrnpdQ60668 355 aaKnown RBP13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Tbc1d1Q60949 1255 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 KaznQ69ZS8 779 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Supt20hQ7TT00 530 aaKnown RBP13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Lrrc14Q8VC16 493 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Olr1Q9EQ09 363 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Rnf4Q9QZS2 194 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Rnf103Q9R1W3 683 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Phf2Q9WTU0 1096 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Dicer1Q8R418 1916 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Pcdh15Q99PJ1 1943 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Sbno2Q7TNB8 1349 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Yy1Q00899 414 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 RalgdsQ03385 852 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Q3TTJ4 293 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Adat2Q6P6J0 191 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Olfml3Q8BK62 406 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Fbxo43Q8CDI2 640 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Kat5Q8CHK4 513 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Tspan8Q8R3G9 235 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Atp2a1Q8R429 994 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Trmt10bQ9D075 318 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Nsmce1Q9D720 266 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Mettl1Q9Z120 268 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Taf4bG5E8Z2 855 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Cyp2c68K7N6C2 491 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Stra6O70491 670 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 CraddO88843 199 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Rps6ka1P18653 724 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Serpina1eQ00898 413 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Rnf113a2Q14B01 337 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Esyt3Q5DTI8 891 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Ttc16Q8C1F5 767 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Gramd4Q8CB44 633 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Nup58Q8R332 587 aa13.1□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Atp2c2A7L9Z8 944 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Pus7B7ZNL8 666 aaKnown RBP13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 4930544D05RikJ3QK56 214 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Rab21P35282 222 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Tatdn3Q3U1C6 294 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Capn13Q3UW68 665 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Tspyl5Q69ZB3 406 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Cyfip1Q7TMB8 1253 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Stk38lQ7TSE6 464 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Sestd1Q80UK0 696 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Trim65Q8BFW4 522 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Tarsl2Q8BLY2 790 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Tmco6Q8BQX5 494 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Lin9Q8C735 542 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Pop1Q8K205 1045 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Nmrk1Q91W63 195 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Ftsj3Q9DBE9 838 aaKnown RBP13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 IvdQ9JHI5 424 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Stk4Q9JI11 487 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Slc12a4Q9JIS8 1085 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Cul1Q9WTX6 776 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Abcb11Q9QY30 1321 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Atp2a2O55143 1044 aaKnown RBP13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Nptx2O70340 429 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Krt8P11679 490 aaKnown RBP13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 MafbP54841 323 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Mfsd14aP70187 490 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Ahcyl1Q80SW1 530 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Hsdl1Q8BTX9 330 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Ccdc28bQ8CEG5 200 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Rassf9Q8K342 435 aa13.09□□□□□ -0.31
Vamp1-203ENSMUST00000100942 Mrpl58Q8R035 206 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms