RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Thumpd2Q9CZB3 528 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Borcs5Q9D920 195 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Prpf4Q9DAW6 521 aaKnown RBP17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Plekhg2Q6KAU7 1340 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Ccng2O08918 344 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Pex5O09012 639 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 WlsQ6DID7 541 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Ddx18Q8K363 660 aaKnown RBP17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Abhd2Q9QXM0 425 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Rasgrp1Q9Z1S3 795 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Skint5A7XUY5 1461 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Srp72F8VQC1 671 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Man1a2P39098 641 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Rgl1Q60695 768 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Cyp3a13Q64464 503 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Epb41l5Q8BGS1 731 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Smok2bQ9QYZ3 484 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Smok2aQ9QYZ6 504 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Gm4985A2ALC6 410 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Adam15O88839 864 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Agap2Q3UHD9 1186 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Lrrc43Q3V0L5 667 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Mapre1Q61166 268 aaKnown RBP17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Psd2Q6P1I6 770 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Gins4Q99LZ3 223 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Ddx56Q9D0R4 546 aaKnown RBP17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Ccdc81Q9D5W4 654 aa17.28■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Rrn3B2RS91 656 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Gm8267E9Q207 261 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Speer4cG3UXD1 256 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Gm10354K7N6A0 256 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Pkn1P70268 946 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Atp9bP98195 1146 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Nme8Q715T0 586 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Asb2Q8K0L0 634 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Ist1Q9CX00 362 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Serpina9Q9D7D2 418 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Akap8lQ9R0L7 642 aaKnown RBP17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 BC005561E9Q5E2 1589 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 PdgfraP26618 1089 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Prkaa1Q5EG47 559 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Mettl25Q6NXH8 597 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Thoc7Q7TMY4 204 aaKnown RBP17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Emc3Q99KI3 261 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 St7Q99M96 577 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 MntO08789 591 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Trim28Q62318 834 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Ubxn7Q6P5G6 467 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Rhot1Q8BG51 631 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Fthl17aQ9DAX0 182 aa17.27■□□□□ 0.36
Col17a1-202ENSMUST00000086923 Zyg11aA2BFL2 627 aa17.27■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Hoxc9P09633 260 aa17.27■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Pax3P24610 479 aa17.27■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Gm4981Q3ULJ8 291 aa17.27■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Nr1d2Q60674 576 aa17.27■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Mms19Q9D071 1031 aa17.27■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Kif21aQ9QXL2 1672 aa17.27■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Gm3424L7N298 263 aa17.27■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Gm8246M0QWX9 263 aa17.27■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Ccnl1Q52KE7 532 aaKnown RBP17.27■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Supt20hQ7TT00 530 aaKnown RBP17.27■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Dis3Q9CSH3 958 aaKnown RBP17.27■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Hmg20aQ9DC33 346 aa17.27■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Stx7O70439 261 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Akr1b1P45376 316 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Arl4aP61213 200 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Smad1P70340 465 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 RelaQ04207 549 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Faf2Q3TDN2 445 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Best2Q8BGM5 508 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Tmem154Q8C4Q9 181 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Ccdc63Q8CDV6 558 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 TraipQ8VIG6 470 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Rtn2O70622 471 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Mgat1P27808 447 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Lrrc8bQ5DU41 803 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Gstt2Q61133 244 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Hsph1Q61699 858 aaKnown RBP17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Brsk2Q69Z98 735 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Tmc8Q7TN58 722 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Adgrb2Q8CGM1 1561 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Nphp4P59240 1425 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Klhl32A2AJX0 620 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Gm3739L7N296 216 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Ftl1P29391 183 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 GnpatP98192 678 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Magee2Q52KG3 523 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Plk4Q64702 925 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Tex13c3Q810P0 219 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Ppme1Q8BVQ5 386 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Trim39Q9ESN2 488 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Serpinb9O08797 374 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Cdh2P15116 906 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Dnal1Q05A62 190 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 ArsiQ32KI9 573 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 2900092C05RikQ5I0V9 184 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Cyp4x1Q6A152 507 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Ankrd45Q810N6 248 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Mb21d2Q8C525 428 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Fbxl13Q8CDU4 790 aa17.26■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms