RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Wnt7bP28047 349 aa10.45□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Yipf3Q3UDR8 347 aa10.45□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Klra7Q60654 280 aa10.45□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Pim2Q62070 370 aa10.45□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Birc2Q62210 612 aa10.45□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Camkk2Q8C078 588 aa10.45□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Cwf19l1Q8CI33 537 aa10.45□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 PawrQ925B0 333 aa10.45□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Orc3Q9JK30 715 aaKnown RBP10.45□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Prmt2Q9R144 448 aa10.45□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Pdcd7Q9WTY1 482 aa10.45□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Apol8A2VDH7 339 aaKnown RBP10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Wdr95D3Z7A8 784 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Gm21962L7N280 338 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Atp9aO70228 1047 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 RcvrnP34057 202 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Spink5Q148R4 1017 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Ksr1Q61097 873 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Uts2bQ765I1 113 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Tmc8Q7TN58 722 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Gnl3Q8CI11 538 aaKnown RBP10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Ero1aQ8R180 464 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Uroc1Q8VC12 676 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Pcdhb12Q91Y07 789 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Unc13dB2RUP2 1085 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Pitpnm1O35954 1243 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Alkbh1P0CB42 389 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Cyp2b9P12790 491 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Ccnd2P30280 289 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Fmr1P35922 614 aaKnown RBP10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Sox10Q04888 466 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Rcn1Q05186 325 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Pid1Q3UBG2 217 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Raver2Q7TPD6 673 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Tmem39bQ810L4 492 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Spire2Q8K1S6 718 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Shtn1Q8K2Q9 631 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 HibchQ8QZS1 385 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Ces1fQ91WU0 561 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Med15Q924H2 789 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 TarsQ9D0R2 722 aaKnown RBP10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Mrpl2Q9D773 306 aaKnown RBP10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 PycardQ9EPB4 193 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Sv2aQ9JIS5 742 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Col4a5Q63ZW6 1691 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Zfp457L7N1X4 647 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Dhx15O35286 795 aaKnown RBP10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Cdc25cP48967 447 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Rit2P70425 217 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Edem3Q2HXL6 931 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Fam193bQ3U2K0 892 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Slc10a4Q3UEZ8 437 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Zdhhc18Q5Y5T2 380 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Stkld1Q80YS9 662 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Znf428Q8C1M2 176 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Trmt10bQ9D075 318 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Tmem79Q9D709 391 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Q9DA42 136 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Rnf6Q9DBU5 667 aa10.44□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Vmn2r15L7N2A0 855 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Itgb5O70309 798 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Fam198bQ3UPI1 517 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 A1cfQ5YD48 595 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Plk4Q64702 925 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Cpa1Q7TPZ8 419 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Zfp120Q8BZW4 436 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Sh3rf3Q8C120 878 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Leg1Q8C6C9 337 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Rab44Q8CB87 725 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 NkapQ9D0F4 415 aaKnown RBP10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Iqcf1Q9D9K8 182 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Slc15a2Q9ES07 729 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Ddx24Q9ESV0 857 aaKnown RBP10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Txnrd2Q9JLT4 524 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Mpp2Q9WV34 552 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Scn3aA2ASI5 1947 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Zscan4-ps3A0A1B0GRH6 506 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Zscan4-ps2A0A1C7CYU6 506 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Zfp839E9PUU5 921 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 CopeO89079 308 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Gtf2bP62915 316 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Slc8a1P70414 970 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Col6a1Q04857 1025 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Rnf10Q3UIW5 804 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Rmdn3Q3UJU9 470 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Slc10a5Q5PT54 434 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 ChukQ60680 745 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Nlrp4fQ66X05 959 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Senp6Q6P7W0 1132 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Q80WR5 230 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 C2cd2lQ80X80 706 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Olfml3Q8BK62 406 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Uba6Q8C7R4 1053 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Cdk9Q99J95 372 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Pagr1aQ99L02 253 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Bcs1lQ9CZP5 418 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Prss23Q9D6X6 382 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Tgm5Q9D7I9 724 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 ErmapQ9JLN5 566 aa10.43□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Mta2Q9R190 668 aa10.43□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms