RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Nsmce3Q9CPR8 279 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Bcl10Q9Z0H7 233 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Kdm7aQ3UWM4 940 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Cacnb1Q8R3Z5 597 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 PigoQ9JJI6 1093 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Kank3Q9Z1P7 791 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Atp2c2A7L9Z8 944 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Gm382B1AXN3 1250 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Ccdc85cE9Q6B2 420 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Cab39Q06138 341 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 CtcfQ61164 736 aaKnown RBP17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Nckap5lQ6GQX2 1323 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Cyp4f40G3UW81 524 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 LtkP08923 888 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Arl13bQ640N2 427 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Arhgap26Q6ZQ82 814 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Slc44a2Q8BY89 706 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Coa7Q921H9 231 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 RalbQ9JIW9 206 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 CtcflA2APF3 636 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Phka2Q8BWJ3 1235 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Ube2q2Q8K2Z8 378 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Slxl1Q9D515 155 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Wdr49A0A0N4SUK7 710 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 SftpdP50404 374 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Nudt18Q3U2V3 323 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Slc7a14Q8BXR1 771 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Defb15Q8R2I5 79 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Ces1Q8VCC2 565 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Thg1lQ9CY52 298 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Adgrb3Q80ZF8 1522 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 A0A1Y7VP24 259 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Gm8994E9PV04 411 aaKnown RBP17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 PbsnO08976 174 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Tlk2O55047 718 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Ap2a2P17427 938 aaKnown RBP17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 TfamP40630 243 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Gfpt1P47856 697 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Cyfip2Q5SQX6 1253 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Trip4Q9QXN3 581 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Dcun1d1Q9QZ73 259 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Ppargc1aO70343 797 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Hoxc10P31257 342 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Actr2P61161 394 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Coq7P97478 217 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Qrich1Q3UA37 777 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Vwa3aQ3UVV9 1148 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Ephx4Q6IE26 359 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Mtmr1Q9Z2C4 669 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Gm7168A0AUV4 508 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Slc35g2D3YVE8 412 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Fam129cD3YZB0 591 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Scg3P47867 471 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Gm21149A0A0G2JFY7 255 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Nck2O55033 380 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Tpp1O89023 562 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Llgl2Q3TJ91 1027 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Nfe2l2Q60795 597 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Gm9758Q80ZT2 255 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Epc1Q8C9X6 813 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Nup85Q8R480 656 aaKnown RBP17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Rpa1Q8VEE4 623 aaKnown RBP17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Lrrc38A2VDH3 298 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Adck2Q6NSR3 617 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Kiaa0556Q8C753 1610 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 GabrdP22933 449 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 RalaP63321 206 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Krt73Q6NXH9 539 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Zfp341Q6PGC9 846 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Scn3bQ8BHK2 215 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Pnma1Q8C1C8 353 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Gm4312K9J7E2 289 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Alppl2P24823 529 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 HpcaP84075 193 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Vil1Q62468 827 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Gm7247Q6UY52 187 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Nup107Q8BH74 926 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Ilf2Q9CXY6 390 aaKnown RBP17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Trpv2Q9WTR1 756 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Nid2O88322 1403 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Prpf4Q9DAW6 521 aaKnown RBP17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 EtfbQ9DCW4 255 aaKnown RBP17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Snx16Q8C080 344 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Olfr866Q8VFI7 312 aa17.41■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 C2P21180 760 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Kcnn2P58390 839 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 ThtpaQ8JZL3 224 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Prkaa1Q5EG47 559 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Pcdha11Q91Y19 950 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Mrpl4Q9DCU6 294 aaKnown RBP17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Dctn3Q9Z0Y1 186 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Simc1E9Q6E9 1354 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Aipl1Q924K1 328 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Abcg8Q9DBM0 673 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Olfr310B2RVZ1 332 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Serpinb2P12388 415 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 PrlrQ08501 608 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Vmn1r209Q5NC97 312 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Slc9a1Q61165 820 aa17.4■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Hoxa13Q62424 386 aa17.4■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms