RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 LdhbP16125 334 aaKnown RBP20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Hoxa11P31311 313 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Mnat1P51949 309 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Gtf2bP62915 316 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Fam81aQ3UXZ6 364 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Thrap3Q569Z6 951 aaKnown RBP20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Zcchc2Q69ZB8 1166 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Kat5Q8CHK4 513 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Plekhg6Q8R0J1 787 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Setd6Q9CWY3 473 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Cnot8Q9D8X5 292 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Dusp21Q9D9D8 189 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 IdeQ9JHR7 1019 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Gm7995L7N2E4 160 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Ifnb1P01575 182 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Phka1P18826 1241 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 ArP19091 899 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Syt2P46097 422 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Klra3Q64329 266 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Tmem132dQ76HP3 1097 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 SnphQ80U23 495 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Yars2Q8BYL4 472 aaKnown RBP20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Usp37Q8C0R0 979 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 MyripQ8K3I4 856 aa20.31■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Fam155bA2BDP1 471 aa20.3■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Taf4bG5E8Z2 855 aa20.3■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Trove2O08848 538 aa20.3■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Kbtbd3Q8BHI4 607 aa20.3■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Tbrg4Q91YM4 630 aaKnown RBP20.3■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Trmt10bQ9D075 318 aa20.3■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Rbm31yQ9D3U4 565 aa20.3■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Olr1Q9EQ09 363 aa20.3■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Rabgef1Q9JM13 491 aa20.3■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 DohhA0A1Y7VJ29 135 aa20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 CaluO35887 315 aa20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 M6prP24668 278 aa20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Mybl1P51960 751 aa20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Pbxip1Q3TVI8 727 aa20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Map3k9Q3U1V8 1077 aa20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Odr4Q4PJX1 447 aa20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Vps41Q5KU39 853 aa20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Pla2g4cQ64GA5 597 aa20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Ddx31Q6NZQ2 687 aaKnown RBP20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Naa25Q8BWZ3 972 aa20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Stxbp5Q8K400 1152 aaKnown RBP20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Gpsm2Q8VDU0 679 aa20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Fgfr1op2Q9CRA9 253 aa20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Fam187aQ9D3R5 417 aa20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Myo5aQ99104 1853 aaKnown RBP20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 LxnP70202 222 aa20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Adcy8P97490 1249 aa20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Fbxo43Q8CDI2 640 aa20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Slc51aQ8R000 340 aa20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 JmyQ9QXM1 983 aa20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Gys1Q9Z1E4 738 aaKnown RBP20.29■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Fyb2A2A995 729 aa20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 1700018F24RikB2RW27 314 aa20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Gm6583E9Q8Z1 469 aa20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Ptp4a2O70274 167 aa20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Creb1Q01147 341 aaKnown RBP20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Rnf10Q3UIW5 804 aa20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Zfp957Q3UT76 567 aa20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Atp13a3Q5XF89 1219 aa20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Tcf12Q61286 706 aa20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Zfp120Q8BZW4 436 aa20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Gm13084A2A8N0 494 aa20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 CidebO70303 219 aa20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Slc16a2O70324 545 aa20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Klrb1Q0ZUP1 214 aa20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Rgl2Q61193 778 aa20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Sec23ipQ6NZC7 998 aa20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 AmphQ7TQF7 686 aa20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 A430089I19RikQ8C9W1 407 aa20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Klhl11Q8CE33 709 aa20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Rpa1Q8VEE4 623 aaKnown RBP20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Mettl16Q9CQG2 553 aaKnown RBP20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Cpne8Q9DC53 577 aa20.28■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Myh14Q6URW6 2000 aa20.27■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 JrklB2RRL2 523 aa20.27■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Olfr552E9Q545 317 aa20.27■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Ccnd2P30280 289 aa20.27■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Rcn1Q05186 325 aa20.27■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Slc10a4Q3UEZ8 437 aa20.27■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Fdxacb1Q3UY23 622 aa20.27■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 MaeaQ4VC33 396 aa20.27■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Brd2Q7JJ13 798 aaKnown RBP20.27■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 MogsQ80UM7 834 aaKnown RBP20.27■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Nipa1Q8BHK1 323 aa20.27■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Pak4Q8BTW9 593 aa20.27■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 Rnf225Q9D7D1 332 aa20.27■□□□□ 0.84
Ccdc50-201ENSMUST00000039443 DgkkE9Q7N4 1118 aa20.27■□□□□ 0.83
Ccdc50-201ENSMUST00000039443 Prl6a1O35257 230 aa20.27■□□□□ 0.83
Ccdc50-201ENSMUST00000039443 Eno1P17182 434 aaKnown RBP20.27■□□□□ 0.83
Ccdc50-201ENSMUST00000039443 Adcy7P51829 1099 aa20.27■□□□□ 0.83
Ccdc50-201ENSMUST00000039443 Aars2Q14CH7 980 aa20.27■□□□□ 0.83
Ccdc50-201ENSMUST00000039443 Palb2Q3U0P1 1104 aa20.27■□□□□ 0.83
Ccdc50-201ENSMUST00000039443 Rhox12Q4TU81 186 aa20.27■□□□□ 0.83
Ccdc50-201ENSMUST00000039443 Ube2q2Q8K2Z8 378 aa20.27■□□□□ 0.83
Ccdc50-201ENSMUST00000039443 Rilpl1Q9JJC6 406 aa20.27■□□□□ 0.83
Ccdc50-201ENSMUST00000039443 H2-OaQ9QWV1 250 aa20.27■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms