RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Adgra1Q8C4G9 578 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Adprhl2Q8CG72 370 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Krt5Q922U2 580 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Xpo6Q924Z6 1125 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Cuedc2Q9CXX9 284 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 1700123K08RikQ9D991 295 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 LrmdaQ9D9B4 229 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Arfgef2A2A5R2 1792 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Alkbh1P0CB42 389 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Npas2P97460 816 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 rp9P97762 213 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Sco1Q5SUC9 284 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Fam214aQ69ZK7 1075 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Rps6kc1Q8BLK9 1056 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 RadxQ8C779 850 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Sirt2Q8VDQ8 389 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ppp1r16bQ8VHQ3 568 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Med1Q925J9 1575 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Psip1Q99JF8 528 aaKnown RBP10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Mettl7bQ9DD20 244 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 XdhQ00519 1335 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ppef2O35385 757 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Stmn1P54227 149 aaKnown RBP10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Shc3Q61120 474 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ddx3xQ62167 662 aaKnown RBP10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Nlrp14Q6B966 993 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Smg5Q6ZPY2 1017 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Fam185aQ7TPD2 378 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tmtc4Q8BG19 741 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ago4Q8CJF8 861 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Mettl13Q91YR5 698 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Rrp15Q9CYX7 281 aaKnown RBP10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Mtmr9Q9Z2D0 545 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Gm382B1AXN3 1250 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Gm3460E9QAI8 215 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 E230025N22RikG5E8S3 482 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tac1P41539 130 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Mxi1P50540 228 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Eif3eP60229 445 aaKnown RBP10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Mif4gdQ3UBZ5 222 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Cnot7Q60809 285 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Orc2Q60862 576 aaKnown RBP10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Myo6Q64331 1265 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ces5aQ6AW46 575 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 MtbpQ8BJS8 894 aaKnown RBP10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 MtrrQ8C1A3 696 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 CgasQ8C6L5 507 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Arfip2Q8K221 341 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 OafQ8QZR4 282 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Fbxw7Q8VBV4 629 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 FdpsQ920E5 353 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Rassf3Q99P51 232 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ppp1r3gQ9CW07 347 aa10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 TarsQ9D0R2 722 aaKnown RBP10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tjp2Q9Z0U1 1167 aaKnown RBP10.89□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 DtnbO70585 659 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Usp4P35123 962 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tlr8P58682 1032 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tspyl5Q69ZB3 406 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Rnf139Q7TMV1 668 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Elac2Q80Y81 831 aaKnown RBP10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 4933428M09RikQ9D3X3 192 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tjp3Q9QXY1 905 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Slc22a3Q9WTW5 551 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Pdcd7Q9WTY1 482 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 B3galt4Q9Z0F0 371 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Krt16Q9Z2K1 469 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Zfp839E9PUU5 921 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Trappc3O55013 180 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Nkx2-5P42582 318 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Rnf10Q3UIW5 804 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Q3UJP5 209 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Zfp956Q3UZY6 572 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Recql4Q75NR7 1216 aaKnown RBP10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ttc16Q8C1F5 767 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Fkbp6Q91XW8 327 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tceal1Q921P9 165 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Apobec3Q99J72 440 aaKnown RBP10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 NonoQ99K48 473 aaKnown RBP10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Taf7lQ9D3R9 471 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tekt1Q9DAJ2 418 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Alox15P39654 663 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Fhod1Q6P9Q4 1197 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Srrm3Q80WV7 648 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Rnaseh2bQ80ZV0 308 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 OplahQ8K010 1288 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Aipl1Q924K1 328 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Rmi1Q9D4G9 616 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Chmp2aQ9DB34 222 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tjap1Q9DCD5 539 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ccdc22Q9JIG7 627 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Arih1Q9Z1K5 555 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Mon2Q80TL7 1715 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Cyp4f40G3UW81 524 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Cyp2c68K7N6C2 491 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Atp13a3Q5XF89 1219 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ece2Q80Z60 881 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Nipa1Q8BHK1 323 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Arhgef19Q8BWA8 802 aa10.88□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Abcg8Q9DBM0 673 aa10.88□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms