RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 TrabdQ99JY4 376 aa17.51■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Rnf103Q9R1W3 683 aa17.51■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 NhsB1AV60 1647 aa17.51■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Cyp4f17G3UW78 524 aa17.51■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Ifnar1P33896 590 aa17.51■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Lrrn2Q6PHP6 730 aa17.51■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Ptrh1Q8BW00 204 aa17.51■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Ces4aQ8R0W5 563 aa17.51■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Uap1Q91YN5 522 aa17.51■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Plagl2Q925T4 496 aa17.51■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Cyp4f16Q99N17 524 aa17.51■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Ddx56Q9D0R4 546 aaKnown RBP17.51■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Gm3460E9QAI8 215 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 CnpP16330 420 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Ddit3P35639 168 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Parp3Q3ULW8 533 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Trim62Q80V85 475 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Pcdha10Q91Y20 946 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Kbtbd12Q9D618 625 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Tjap1Q9DCD5 539 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Pard6bQ9JK83 371 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Git2Q9JLQ2 708 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Gm28036V9GXJ1 658 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Gm3424L7N298 263 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Gm8246M0QWX9 263 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Psma2P49722 234 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Krt80Q0VBK2 452 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Klra9Q2TJJ8 266 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Serpinb6Q60854 378 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Dcun1d2Q8BZJ7 259 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Alg3Q8K2A8 438 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 IrgqQ8VIM9 583 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Spats2lQ91WJ7 558 aaKnown RBP17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Pard3bQ9CSB4 1203 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Trpv2Q9WTR1 756 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Iqgap3F8VQ29 1632 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Zfp839E9PUU5 921 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Smad1P70340 465 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Nr2c1Q505F1 590 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Tmem109Q3UBX0 243 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Dnajc5gQ8C632 165 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Leng8Q8CBY3 785 aaKnown RBP17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 DpydQ8CHR6 1025 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Tgif2lx2Q8K5B9 231 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Trub2Q91WG3 331 aaKnown RBP17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Basp1Q91XV3 226 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Cdk9Q99J95 372 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Med24Q99K74 987 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Emc2Q9CRD2 297 aa17.5■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Kiaa1210E9Q0C6 1637 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Arhgef26D3YYY8 869 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Tmem132bF7BAB2 1078 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Tal1P22091 329 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Armc7Q3UJZ3 198 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Adi1Q99JT9 179 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Gyg1Q9R062 333 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Gm3187M0QWW3 260 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Dync1i2O88487 612 aaKnown RBP17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 PrkceP16054 737 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Rasa2P58069 847 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 SnrpfP62307 86 aaKnown RBP17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Cnot7Q60809 285 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Lilrb4Q64281 335 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Usp8Q80U87 1080 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Usp38Q8BW70 1042 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Tube1Q9D6T1 475 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Gm16430A6X8J1 155 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Cap1P40124 474 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Hspa4lP48722 838 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 CstaP56567 97 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Crnkl1P63154 690 aaKnown RBP17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Tmem35bQ3U0Y2 150 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Tcf12Q61286 706 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Ptk6Q64434 451 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Adck2Q6NSR3 617 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Nr3c2Q8VII8 978 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Fkbp6Q91XW8 327 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Fgfr1op2Q9CRA9 253 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Scrn1Q9CZC8 414 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Pdk2Q9JK42 407 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 MaddQ80U28 1577 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Zfp212G3X8R7 492 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Rab6bP61294 208 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Snai1Q02085 264 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Sik2Q8CFH6 931 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Psmd9Q9CR00 222 aa17.49■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Zfand4D3Z3C6 739 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Prl2c3P04768 224 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Inpp1P49442 396 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 CtifQ6PEE2 600 aaKnown RBP17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Mmgt1Q8K273 131 aaKnown RBP17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Mrpl47Q8K2Y7 252 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Mtss1Q8R1S4 759 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Mettl13Q91YR5 698 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Ap2b1Q9DBG3 937 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Kcnh7Q9ER47 1195 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Fbxl16A2RT62 479 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Krt1P04104 637 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Irx2P81066 474 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Gramd1bQ80TI0 738 aa17.48■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms