RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Cyfip1Q7TMB8 1253 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Rnf139Q7TMV1 668 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Tom1l1Q923U0 474 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Q9CYI0 393 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Gtf2ird1Q9JI57 1104 aaKnown RBP16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Entpd5Q9WUZ9 427 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Tspoap1Q7TNF8 1846 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Mmrn2A6H6E2 943 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Spata31d1dE9Q5W2 1247 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 AunipE9Q6Z5 340 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 AfmO89020 608 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Krt19P19001 403 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 RxrbP28704 520 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Fmr1P35922 614 aaKnown RBP16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Neurl1bQ0MW30 546 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Trim21Q62191 470 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 HlcsQ920N2 722 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Rab11fip1Q9D620 645 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Mrpl2Q9D773 306 aaKnown RBP16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Has3O08650 554 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Tnfrsf18O35714 228 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 SfnO70456 248 aaKnown RBP16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Mmp20P57748 482 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Frg1P97376 258 aaKnown RBP16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Serpina1eQ00898 413 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Zfp957Q3UT76 567 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Pdk2Q9JK42 407 aa16.06■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Gm1661E9Q963 441 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Eftud2O08810 971 aaKnown RBP16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 CaluO35887 315 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Akr1b8P45377 316 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Q3UTZ3 580 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Klra3Q64329 266 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Xlr3bQ6P205 226 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Iffo1Q8BXL9 562 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Acot11Q8VHQ9 594 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Ces1fQ91WU0 561 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Patl2A2ARM1 529 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Marcksl1P28667 200 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 NsfP46460 744 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 VegfaQ00731 214 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 ZufspQ3T9Z9 577 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Gpr156Q6PCP7 798 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Fam118bQ8C569 351 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Slc26a7Q8R2Z3 656 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Wrap53Q8VC51 532 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Rnf25Q9QZR0 456 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Ptgdr2Q9Z2J6 382 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Serpinb6cW4VSP4 379 aa16.05■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Pds5aQ6A026 1332 aa16.04■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Casq2O09161 415 aa16.04■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Actr2P61161 394 aa16.04■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Tex11Q14AT2 947 aa16.04■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Calcoco1Q8CGU1 691 aa16.04■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Dnm1lQ8K1M6 742 aa16.04■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Vmn1r64Q8R2B8 320 aa16.04■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 1700016D06RikQ9DAA5 166 aa16.04■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 SerhlQ9EPB5 311 aa16.04■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Phf2Q9WTU0 1096 aa16.04■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Taf1Q80UV9 1891 aa16.04■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Gpr161B2RPY5 545 aa16.04■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 TxkP42682 527 aa16.04■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Casp7P97864 303 aa16.04■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Agbl1Q09M05 972 aa16.04■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Ccdc33Q3ULW6 985 aa16.04■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 C8aQ8K182 587 aa16.04■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 4930550L24RikQ99PA7 320 aa16.04■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Ecel1Q9JMI0 775 aa16.04■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Rhox5P52651 210 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Kmt5aQ2YDW7 349 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 SpertQ32MG2 446 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Ddx49Q4FZF3 480 aaKnown RBP16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Znf697Q569E7 569 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Krt12Q64291 487 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Dync1li2Q6PDL0 492 aaKnown RBP16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Ccdc186Q8C9S4 917 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Olfr1499Q8VG65 314 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Znf394Q9Z1D9 521 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Gm11549A0A286YD83 63 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Tulp2P46686 562 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Grm2Q14BI2 872 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Mapk4Q6P5G0 583 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Slf1Q8R3P9 1054 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Lman1lQ8VCD3 505 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Pcdha2Q91Y17 948 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Taf4bG5E8Z2 855 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Tmprss11eQ5S248 423 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Sema5bQ60519 1093 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Ppp1r1bQ60829 194 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 StilQ60988 1262 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 ErfeQ6PGN1 340 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Wnk4Q80UE6 1222 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Ago2Q8CJG0 860 aaKnown RBP16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Trpm8Q8R4D5 1104 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 PawrQ925B0 333 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Rilpl1Q9JJC6 406 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 PigoQ9JJI6 1093 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Ddx20Q9JJY4 825 aaKnown RBP16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Smok2bQ9QYZ3 484 aa16.03■□□□□ 0.16
Nkx3-1-201ENSMUST00000022646 Smok2aQ9QYZ6 504 aa16.03■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 57.7 ms