RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 MamstrQ0ZCJ7 421 aa9.79□□□□□ -0.84
Ctc1-201ENSMUST00000021278 SpdyaQ5IBH7 310 aa9.79□□□□□ -0.84
Ctc1-201ENSMUST00000021278 ZyxQ62523 564 aa9.79□□□□□ -0.84
Ctc1-201ENSMUST00000021278 MarsQ68FL6 902 aaKnown RBP9.79□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Psmd11Q8BG32 422 aa9.79□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Nrbf2Q8VCQ3 287 aa9.79□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Spesp1Q9D5A0 399 aa9.79□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Gins2Q9D600 185 aa9.79□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Dach1Q9QYB2 751 aa9.79□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Gm7682A0A0J9YUM1 481 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Lcn5A2AJB7 192 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Osbpl8B9EJ86 889 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 PtproE9Q612 1226 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Snap23O09044 210 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 SagP20443 403 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Armcx5Q3UZB0 606 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 MycbpapQ5SUV2 932 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Trim38Q5SZ99 471 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Stxbp3Q60770 592 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 XiapQ60989 496 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Esco1Q69Z69 843 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Dhx33Q80VY9 698 aaKnown RBP9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Elac2Q80Y81 831 aaKnown RBP9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Gnl3Q8CI11 538 aaKnown RBP9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Grk2Q99MK8 689 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Efhd1Q9D4J1 240 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Rabl3Q9D4V7 236 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Erap1Q9EQH2 930 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Itga2bQ9QUM0 1033 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Rnf25Q9QZR0 456 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 GdaQ9R111 454 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Igsf1Q7TQA1 1317 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Gm3739L7N296 216 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 ZfrO88532 1074 aaKnown RBP9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Hmgb2P30681 210 aaKnown RBP9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Grin1P35438 938 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Rrp36Q3UFY0 244 aaKnown RBP9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Krt32Q62168 407 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Gabbr2Q80T41 940 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Ip6k2Q80V72 448 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Slc6a15Q8BG16 729 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Atp6v1g3Q8BMC1 118 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Fbxl5Q8C2S5 690 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Fbxl13Q8CDU4 790 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Uba5Q8VE47 403 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Trim59Q922Y2 403 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Chst12Q99LL3 419 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Hormad1Q9D5T7 392 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Rtn3Q9ES97 964 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Abcb9Q9JJ59 762 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Gm2012B1B0R1 212 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Gm4297D3YWB7 211 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Slc22a8O88909 537 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Cetn1P41209 172 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Traf3ip1Q149C2 625 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Parp6Q6P6P7 630 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Dlgap3Q6PFD5 977 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Tas2r124Q7M718 309 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Mcph1Q7TT79 822 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Abraxas1Q8BPZ8 407 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Bud13Q8R149 637 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Taf6lQ8R2K4 616 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Mmtag2Q99LX5 260 aaKnown RBP9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Thap12Q9CUX1 758 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Rex1bdQ9CYZ6 169 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Katnal2Q9D3R6 539 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 VarsQ9Z1Q9 1263 aaKnown RBP9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Znf536Q8K083 1302 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Gucy1a2F8VQK3 730 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 PrlP06879 226 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Fam117bQ3U3E2 584 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 MyrfQ3UR85 1138 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Ppp4r3cQ3V0Y1 813 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 HnrnpdQ60668 355 aaKnown RBP9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Dnajc1Q61712 552 aaKnown RBP9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Usp37Q8C0R0 979 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Ugt3a2Q8JZZ0 523 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 CerkQ8K4Q7 531 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Krt5Q922U2 580 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Rpa3Q9CQ71 121 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Cap2Q9CYT6 476 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Borcs5Q9D920 195 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Usp12Q9D9M2 370 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Pdzd9Q9D9M4 266 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Aldh18a1Q9Z110 795 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Nfs1Q9Z1J3 459 aa9.78□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Usp42B2RQC2 1324 aaKnown RBP9.77□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Kdm6aO70546 1401 aa9.77□□□□□ -0.84
Ctc1-201ENSMUST00000021278 Zc3h7aE9PWW6 970 aaKnown RBP9.77□□□□□ -0.85
Ctc1-201ENSMUST00000021278 B020004C17RikJ3QP07 232 aa9.77□□□□□ -0.85
Ctc1-201ENSMUST00000021278 PtgisO35074 501 aa9.77□□□□□ -0.85
Ctc1-201ENSMUST00000021278 MybP06876 636 aa9.77□□□□□ -0.85
Ctc1-201ENSMUST00000021278 Trim43bP86448 445 aa9.77□□□□□ -0.85
Ctc1-201ENSMUST00000021278 Klra8Q60682 266 aa9.77□□□□□ -0.85
Ctc1-201ENSMUST00000021278 Als2clQ60I26 952 aa9.77□□□□□ -0.85
Ctc1-201ENSMUST00000021278 Lcn3Q62471 182 aa9.77□□□□□ -0.85
Ctc1-201ENSMUST00000021278 Krr1Q8BGA5 380 aaKnown RBP9.77□□□□□ -0.85
Ctc1-201ENSMUST00000021278 Enoph1Q8BGB7 257 aa9.77□□□□□ -0.85
Ctc1-201ENSMUST00000021278 Nars2Q8BGV0 477 aa9.77□□□□□ -0.85
Ctc1-201ENSMUST00000021278 Fut11Q8BHC9 489 aa9.77□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms