RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C RPL6BP05739 176 aaKnown RBP6.86□□□□□ -1.31
LSP1YPL004C MATALPHA1P0CY06 175 aa6.86□□□□□ -1.31
LSP1YPL004C HMLALPHA1P0CY07 175 aa6.86□□□□□ -1.31
LSP1YPL004C RPS5P26783 225 aaKnown RBP6.86□□□□□ -1.31
LSP1YPL004C DEG1P31115 442 aaKnown RBP6.86□□□□□ -1.31
LSP1YPL004C ARO7P32178 256 aa6.86□□□□□ -1.31
LSP1YPL004C MRT4P33201 236 aaKnown RBP6.86□□□□□ -1.31
LSP1YPL004C MKS1P34072 584 aa6.86□□□□□ -1.31
LSP1YPL004C YKL107WP34251 309 aa6.86□□□□□ -1.31
LSP1YPL004C MTH1P35198 433 aa6.86□□□□□ -1.31
LSP1YPL004C RSM22P36056 628 aa6.86□□□□□ -1.31
LSP1YPL004C IES5P40060 125 aa6.86□□□□□ -1.31
LSP1YPL004C FLX1P40464 311 aa6.86□□□□□ -1.31
LSP1YPL004C YJL218WP40892 196 aaKnown RBP6.86□□□□□ -1.31
LSP1YPL004C PAM16P42949 149 aa6.86□□□□□ -1.31
LSP1YPL004C LYS20P48570 428 aaKnown RBP6.86□□□□□ -1.31
LSP1YPL004C PHB2P50085 310 aa6.86□□□□□ -1.31
LSP1YPL004C MTL1P53214 551 aa6.86□□□□□ -1.31
LSP1YPL004C YNR048WP53740 393 aa6.86□□□□□ -1.31
LSP1YPL004C DMA2P53924 522 aa6.86□□□□□ -1.31
LSP1YPL004C SED1Q01589 338 aa6.86□□□□□ -1.31
LSP1YPL004C GPI17Q04080 534 aa6.86□□□□□ -1.31
LSP1YPL004C DLT1Q04216 342 aa6.86□□□□□ -1.31
LSP1YPL004C SRL2Q12020 392 aa6.86□□□□□ -1.31
LSP1YPL004C LYS21Q12122 440 aaKnown RBP6.86□□□□□ -1.31
LSP1YPL004C SIR2P06700 562 aa6.85□□□□□ -1.31
LSP1YPL004C CDC31P06704 161 aaKnown RBP6.85□□□□□ -1.31
LSP1YPL004C RPS23AP0CX29 145 aaKnown RBP6.85□□□□□ -1.31
LSP1YPL004C RPS23BP0CX30 145 aa6.85□□□□□ -1.31
LSP1YPL004C RPL30P14120 105 aaKnown RBP6.85□□□□□ -1.31
LSP1YPL004C PAU2P32612 120 aa6.85□□□□□ -1.31
LSP1YPL004C REC114P32841 428 aa6.85□□□□□ -1.31
LSP1YPL004C SFK1P35735 353 aa6.85□□□□□ -1.31
LSP1YPL004C MCH2P36032 473 aa6.85□□□□□ -1.31
LSP1YPL004C FAT1P38225 669 aa6.85□□□□□ -1.31
LSP1YPL004C CCZ1P38273 704 aa6.85□□□□□ -1.31
LSP1YPL004C ECM14P38836 430 aa6.85□□□□□ -1.31
LSP1YPL004C ARO9P38840 513 aaPredicted RBP6.85□□□□□ -1.31
LSP1YPL004C ERJ5P43613 295 aaPredicted RBP6.85□□□□□ -1.31
LSP1YPL004C YJL016WP47072 561 aa6.85□□□□□ -1.31
LSP1YPL004C POP6P53218 158 aa6.85□□□□□ -1.31
LSP1YPL004C IMO32P53219 342 aa6.85□□□□□ -1.31
LSP1YPL004C PXR1P53335 271 aaPredicted RBP6.85□□□□□ -1.31
LSP1YPL004C INN1P53901 409 aa6.85□□□□□ -1.31
LSP1YPL004C YMR279CQ03263 540 aa6.85□□□□□ -1.31
LSP1YPL004C PEX30Q06169 523 aa6.85□□□□□ -1.31
LSP1YPL004C TMC1Q08422 150 aaPredicted RBP6.85□□□□□ -1.31
LSP1YPL004C SPO24Q3E752 67 aa6.85□□□□□ -1.31
LSP1YPL004C YLR099W-AQ3E798 87 aa6.85□□□□□ -1.31
LSP1YPL004C Q0297Q9ZZV8 51 aa6.85□□□□□ -1.31
LSP1YPL004C MSI1P13712 422 aa6.84□□□□□ -1.31
LSP1YPL004C MNS1P32906 549 aa6.84□□□□□ -1.31
LSP1YPL004C PPZ2P33329 710 aa6.84□□□□□ -1.31
LSP1YPL004C SPC29P33419 253 aa6.84□□□□□ -1.31
LSP1YPL004C RCN1P36054 211 aa6.84□□□□□ -1.31
LSP1YPL004C SHM2P37291 469 aaKnown RBP6.84□□□□□ -1.31
LSP1YPL004C SSH1P38353 490 aaKnown RBP6.84□□□□□ -1.31
LSP1YPL004C YIL012WP40551 113 aa6.84□□□□□ -1.31
LSP1YPL004C SBH2P52871 88 aa6.84□□□□□ -1.31
LSP1YPL004C YIP4P53093 235 aa6.84□□□□□ -1.31
LSP1YPL004C YGL159WP53110 370 aa6.84□□□□□ -1.31
LSP1YPL004C TYW3P53177 273 aa6.84□□□□□ -1.31
LSP1YPL004C PEF1P53238 335 aa6.84□□□□□ -1.31
LSP1YPL004C YNL046WP53956 172 aa6.84□□□□□ -1.31
LSP1YPL004C CIK1Q01649 594 aa6.84□□□□□ -1.31
LSP1YPL004C YDC1Q02896 317 aa6.84□□□□□ -1.31
LSP1YPL004C NMA1Q06178 401 aaKnown RBP6.84□□□□□ -1.31
LSP1YPL004C FSH3Q99369 266 aa6.84□□□□□ -1.31
LSP1YPL004C PHO4P07270 312 aaKnown RBP6.83□□□□□ -1.32
LSP1YPL004C HNM1P19807 563 aa6.83□□□□□ -1.32
LSP1YPL004C HXT2P23585 541 aa6.83□□□□□ -1.32
LSP1YPL004C ERG24P32462 438 aaKnown RBP6.83□□□□□ -1.32
LSP1YPL004C TCM62P38228 572 aaKnown RBP6.83□□□□□ -1.32
LSP1YPL004C YBR137WP38276 179 aa6.83□□□□□ -1.32
LSP1YPL004C ARC40P38328 384 aaKnown RBP6.83□□□□□ -1.32
LSP1YPL004C ATF1P40353 525 aa6.83□□□□□ -1.32
LSP1YPL004C EGT2P42835 1041 aa6.83□□□□□ -1.32
LSP1YPL004C CIN2P46670 268 aa6.83□□□□□ -1.32
LSP1YPL004C YJR120WP47157 116 aa6.83□□□□□ -1.32
LSP1YPL004C TEX1P53851 422 aaKnown RBP6.83□□□□□ -1.32
LSP1YPL004C YPR098CQ06089 161 aa6.83□□□□□ -1.32
LSP1YPL004C RFU1Q08003 200 aa6.83□□□□□ -1.32
LSP1YPL004C ORT1Q12375 292 aa6.83□□□□□ -1.32
LSP1YPL004C YLR358CO13565 187 aa6.82□□□□□ -1.32
LSP1YPL004C SAG1P20840 650 aa6.82□□□□□ -1.32
LSP1YPL004C RPL24BP24000 155 aaKnown RBP6.82□□□□□ -1.32
LSP1YPL004C AFG1P32317 509 aa6.82□□□□□ -1.32
LSP1YPL004C SNC2P33328 115 aa6.82□□□□□ -1.32
LSP1YPL004C ZRT3P34240 503 aa6.82□□□□□ -1.32
LSP1YPL004C RNH201P53942 307 aa6.82□□□□□ -1.32
LSP1YPL004C MSS11Q03825 758 aa6.82□□□□□ -1.32
LSP1YPL004C SPR28Q04921 423 aa6.82□□□□□ -1.32
LSP1YPL004C GPN3Q06543 272 aa6.82□□□□□ -1.32
LSP1YPL004C GCN4P03069 281 aa6.81□□□□□ -1.32
LSP1YPL004C HIS3P06633 220 aa6.81□□□□□ -1.32
LSP1YPL004C ADK1P07170 222 aaKnown RBP6.81□□□□□ -1.32
LSP1YPL004C SGA1P08019 549 aa6.81□□□□□ -1.32
LSP1YPL004C YML003WP0CF16 290 aa6.81□□□□□ -1.32
LSP1YPL004C YOX1P34161 385 aa6.81□□□□□ -1.32
LSP1YPL004C SHE2P36068 246 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
Retrieved 100 of 5,963 RNA–protein pairs in 141.6 ms