RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W CTA1P15202 515 aa1.7□□□□□ -2.14
HER1YOR227W KAR9P32526 644 aa1.7□□□□□ -2.14
HER1YOR227W CAT2P32796 670 aaKnown RBP1.7□□□□□ -2.14
HER1YOR227W CSE2P33308 149 aa1.7□□□□□ -2.14
HER1YOR227W AIM3P38266 947 aaKnown RBP1.7□□□□□ -2.14
HER1YOR227W YHR035WP38769 630 aa1.7□□□□□ -2.14
HER1YOR227W AIM18P38884 321 aa1.7□□□□□ -2.14
HER1YOR227W SEO1P39709 593 aa1.7□□□□□ -2.14
HER1YOR227W VPS52P39904 641 aa1.7□□□□□ -2.14
HER1YOR227W RPL10P41805 221 aaKnown RBP1.7□□□□□ -2.14
HER1YOR227W TES1P41903 349 aaKnown RBP1.7□□□□□ -2.14
HER1YOR227W PMT4P46971 762 aa1.7□□□□□ -2.14
HER1YOR227W LSM1P47017 172 aaKnown RBP1.7□□□□□ -2.14
HER1YOR227W TAD2P47058 250 aa1.7□□□□□ -2.14
HER1YOR227W BIR1P47134 954 aa1.7□□□□□ -2.14
HER1YOR227W SUR7P54003 302 aa1.7□□□□□ -2.14
HER1YOR227W IRC15Q02733 499 aa1.7□□□□□ -2.14
HER1YOR227W HCR1Q05775 265 aaKnown RBP1.7□□□□□ -2.14
HER1YOR227W YOL073CQ08232 322 aa1.7□□□□□ -2.14
HER1YOR227W HNT3Q08702 217 aa1.7□□□□□ -2.14
HER1YOR227W YOR114WQ12219 294 aa1.7□□□□□ -2.14
HER1YOR227W YCT1Q12235 531 aa1.7□□□□□ -2.14
HER1YOR227W MCT1Q12283 360 aa1.7□□□□□ -2.14
HER1YOR227W WTM1Q12363 437 aaKnown RBP1.7□□□□□ -2.14
HER1YOR227W PET494P07390 489 aaPredicted RBP1.7□□□□□ -2.14
HER1YOR227W TFS1P14306 219 aa1.7□□□□□ -2.14
HER1YOR227W SCL1P21243 252 aaKnown RBP1.7□□□□□ -2.14
HER1YOR227W RNA14P25298 677 aaKnown RBP1.7□□□□□ -2.14
HER1YOR227W STP22P25604 385 aa1.7□□□□□ -2.14
HER1YOR227W SNC1P31109 117 aa1.7□□□□□ -2.14
HER1YOR227W SPS18P32572 300 aa1.7□□□□□ -2.14
HER1YOR227W TIR2P33890 251 aa1.7□□□□□ -2.14
HER1YOR227W EDC3P39998 551 aaKnown RBP1.7□□□□□ -2.14
HER1YOR227W CIN2P46670 268 aa1.7□□□□□ -2.14
HER1YOR227W NQM1P53228 333 aaPredicted RBP1.7□□□□□ -2.14
HER1YOR227W PIR1Q03178 341 aa1.7□□□□□ -2.14
HER1YOR227W SNX41Q04053 625 aa1.7□□□□□ -2.14
HER1YOR227W PRM6Q04705 352 aa1.7□□□□□ -2.14
HER1YOR227W YMR315WQ04869 349 aaKnown RBP1.7□□□□□ -2.14
HER1YOR227W YPR147CQ06522 304 aaKnown RBP1.7□□□□□ -2.14
HER1YOR227W YEH2Q07950 538 aa1.7□□□□□ -2.14
HER1YOR227W YLR049CQ12110 428 aa1.7□□□□□ -2.14
HER1YOR227W RDL1Q12305 139 aaKnown RBP1.7□□□□□ -2.14
HER1YOR227W OCA6Q12454 224 aa1.7□□□□□ -2.14
HER1YOR227W YOL163WP0CF20 169 aa1.69□□□□□ -2.14
HER1YOR227W CMK2P22517 447 aa1.69□□□□□ -2.14
HER1YOR227W YOX1P34161 385 aa1.69□□□□□ -2.14
HER1YOR227W FRE2P36033 711 aa1.69□□□□□ -2.14
HER1YOR227W VPS51P36116 164 aa1.69□□□□□ -2.14
HER1YOR227W YCR087C-AP37263 153 aa1.69□□□□□ -2.14
HER1YOR227W RCK1P38622 512 aa1.69□□□□□ -2.14
HER1YOR227W PAC2P39937 518 aa1.69□□□□□ -2.14
HER1YOR227W ARG2P40360 574 aa1.69□□□□□ -2.14
HER1YOR227W MDV1P47025 714 aa1.69□□□□□ -2.14
HER1YOR227W YPT32P51996 222 aaKnown RBP1.69□□□□□ -2.14
HER1YOR227W TPC1P53257 314 aa1.69□□□□□ -2.14
HER1YOR227W NRK1P53915 240 aa1.69□□□□□ -2.14
HER1YOR227W YPL113CQ02961 396 aa1.69□□□□□ -2.14
HER1YOR227W YDR248CQ03786 193 aa1.69□□□□□ -2.14
HER1YOR227W UTP15Q04305 513 aaKnown RBP1.69□□□□□ -2.14
HER1YOR227W API2Q04413 109 aa1.69□□□□□ -2.14
HER1YOR227W RIF2Q06208 395 aa1.69□□□□□ -2.14
HER1YOR227W VPS74Q06385 345 aa1.69□□□□□ -2.14
HER1YOR227W FRE8Q12209 686 aa1.69□□□□□ -2.14
HER1YOR227W TPT1Q12272 230 aaKnown RBP1.69□□□□□ -2.14
HER1YOR227W NOT5Q12514 560 aaPredicted RBP1.69□□□□□ -2.14
HER1YOR227W PUT1P09368 476 aa1.69□□□□□ -2.14
HER1YOR227W CDC10P25342 322 aaKnown RBP1.69□□□□□ -2.14
HER1YOR227W PUB1P32588 453 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
HER1YOR227W JEN1P36035 616 aa1.69□□□□□ -2.14
HER1YOR227W SOL2P37262 315 aa1.69□□□□□ -2.14
HER1YOR227W YHK8P38776 514 aa1.69□□□□□ -2.14
HER1YOR227W TIM17P39515 158 aa1.69□□□□□ -2.14
HER1YOR227W RBG1P39729 369 aa1.69□□□□□ -2.14
HER1YOR227W SFH5P47008 294 aa1.69□□□□□ -2.14
HER1YOR227W CPD1P53314 239 aa1.69□□□□□ -2.14
HER1YOR227W CAF40P53829 373 aa1.69□□□□□ -2.14
HER1YOR227W PRM15Q03262 622 aa1.69□□□□□ -2.14
HER1YOR227W ARC18Q05933 178 aaKnown RBP1.69□□□□□ -2.14
HER1YOR227W MRX9Q07349 420 aaKnown RBP1.69□□□□□ -2.14
HER1YOR227W MIM1Q08176 113 aa1.69□□□□□ -2.14
HER1YOR227W RIO1Q12196 484 aaKnown RBP1.69□□□□□ -2.14
HER1YOR227W SEN2P16658 377 aa1.69□□□□□ -2.14
HER1YOR227W RNA15P25299 296 aaPredicted RBP1.69□□□□□ -2.14
HER1YOR227W ATG15P25641 520 aa1.69□□□□□ -2.14
HER1YOR227W TIP1P27654 210 aaPredicted RBP1.69□□□□□ -2.14
HER1YOR227W CTS1P29029 562 aa1.69□□□□□ -2.14
HER1YOR227W ARO7P32178 256 aa1.69□□□□□ -2.14
HER1YOR227W ZRT1P32804 376 aa1.69□□□□□ -2.14
HER1YOR227W SPT4P32914 102 aaPredicted RBP1.69□□□□□ -2.14
HER1YOR227W PCL5P38794 229 aa1.69□□□□□ -2.14
HER1YOR227W MST28P39552 234 aa1.69□□□□□ -2.14
HER1YOR227W TRM9P49957 279 aa1.69□□□□□ -2.14
HER1YOR227W RCF2P53721 224 aa1.69□□□□□ -2.14
HER1YOR227W SPR6Q01684 191 aa1.69□□□□□ -2.14
HER1YOR227W ODC1Q03028 310 aa1.69□□□□□ -2.14
HER1YOR227W SPC24Q04477 213 aa1.69□□□□□ -2.14
HER1YOR227W SFH1Q06168 426 aa1.69□□□□□ -2.14
HER1YOR227W RDL2Q08742 149 aaKnown RBP1.69□□□□□ -2.14
HER1YOR227W DAS2Q12084 232 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms