RNA–Protein interactions for RNA: YNL245C

CWC25, Transcript of Splicing factor required for the first step of pre-mRNA splicing, yeast

Gene CWC25, Length 540 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWC25	YNL245C	TPO5	P36029	618 aa		4.17	□□□□□ -1.74
CWC25	YNL245C	TDA11	P38854	504 aa		4.17	□□□□□ -1.74
CWC25	YNL245C	BDH1	P39714	382 aa		4.17	□□□□□ -1.74
CWC25	YNL245C	FRT2	P39734	528 aa		4.17	□□□□□ -1.74
CWC25	YNL245C	RTC4	P53850	401 aa		4.17	□□□□□ -1.74
CWC25	YNL245C	ALG11	P53954	548 aa	Known RBP	4.17	□□□□□ -1.74
CWC25	YNL245C	TAZ1	Q06510	381 aa		4.17	□□□□□ -1.74
CWC25	YNL245C	TRM10	Q12400	293 aa		4.17	□□□□□ -1.74
CWC25	YNL245C	FRS2	P15625	503 aa	Known RBP	4.16	□□□□□ -1.74
CWC25	YNL245C	RPB9	P27999	122 aa		4.16	□□□□□ -1.74
CWC25	YNL245C	CDC13	P32797	924 aa	Known RBP	4.16	□□□□□ -1.74
CWC25	YNL245C	SHQ1	P40486	507 aa	Predicted RBP	4.16	□□□□□ -1.74
CWC25	YNL245C	YIL054W	P40524	105 aa		4.16	□□□□□ -1.74
CWC25	YNL245C	YIA6	P40556	373 aa		4.16	□□□□□ -1.74
CWC25	YNL245C	MIC19	P43594	170 aa		4.16	□□□□□ -1.74
CWC25	YNL245C	YGL118C	P53132	145 aa		4.16	□□□□□ -1.74
CWC25	YNL245C	GPN3	Q06543	272 aa		4.16	□□□□□ -1.74
CWC25	YNL245C	YDL211C	Q12121	372 aa		4.16	□□□□□ -1.74
CWC25	YNL245C	SSA3	P09435	649 aa	Known RBP	4.15	□□□□□ -1.75
CWC25	YNL245C	RPL4A	P10664	362 aa	Known RBP	4.15	□□□□□ -1.75
CWC25	YNL245C	RPL4B	P49626	362 aa	Known RBP	4.15	□□□□□ -1.75
CWC25	YNL245C	PEX30	Q06169	523 aa		4.15	□□□□□ -1.75
CWC25	YNL245C	CAB3	P36076	571 aa		4.14	□□□□□ -1.75
CWC25	YNL245C	FRM2	P37261	193 aa		4.14	□□□□□ -1.75
CWC25	YNL245C	FMP33	P46998	180 aa		4.14	□□□□□ -1.75
CWC25	YNL245C	YPL278C	Q08990	100 aa		4.14	□□□□□ -1.75
CWC25	YNL245C	RRP36	Q12481	300 aa	Predicted RBP	4.14	□□□□□ -1.75
CWC25	YNL245C	TDH1	P00360	332 aa	Known RBP	4.13	□□□□□ -1.75
CWC25	YNL245C	TFS1	P14306	219 aa		4.13	□□□□□ -1.75
CWC25	YNL245C	YSR3	P23501	404 aa		4.13	□□□□□ -1.75
CWC25	YNL245C	MRPL6	P32904	214 aa		4.13	□□□□□ -1.75
CWC25	YNL245C	SPT4	P32914	102 aa	Predicted RBP	4.13	□□□□□ -1.75
CWC25	YNL245C	COY1	P34237	679 aa		4.13	□□□□□ -1.75
CWC25	YNL245C	DED81	P38707	554 aa	Known RBP	4.13	□□□□□ -1.75
CWC25	YNL245C	CAX4	P53223	239 aa		4.13	□□□□□ -1.75
CWC25	YNL245C	SGT2	Q12118	346 aa	Known RBP	4.13	□□□□□ -1.75
CWC25	YNL245C	PEX34	P25584	144 aa		4.12	□□□□□ -1.75
CWC25	YNL245C	BMH1	P29311	267 aa	Known RBP	4.12	□□□□□ -1.75
CWC25	YNL245C	PRX1	P34227	261 aa	Known RBP	4.12	□□□□□ -1.75
CWC25	YNL245C	TRR2	P38816	342 aa		4.12	□□□□□ -1.75
CWC25	YNL245C	EMC2	P47133	292 aa	Known RBP	4.12	□□□□□ -1.75
CWC25	YNL245C	YPT32	P51996	222 aa	Known RBP	4.12	□□□□□ -1.75
CWC25	YNL245C	NBP1	P52919	319 aa	Predicted RBP	4.12	□□□□□ -1.75
CWC25	YNL245C	HST4	P53688	370 aa		4.12	□□□□□ -1.75
CWC25	YNL245C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
CWC25	YNL245C	TLG1	Q03322	224 aa		4.12	□□□□□ -1.75
CWC25	YNL245C	CWC21	Q03375	135 aa	Known RBP	4.12	□□□□□ -1.75
CWC25	YNL245C	DPP1	Q05521	289 aa		4.12	□□□□□ -1.75
CWC25	YNL245C	VPS3	P23643	1011 aa		4.11	□□□□□ -1.75
CWC25	YNL245C	MRPL37	P36532	105 aa		4.11	□□□□□ -1.75
CWC25	YNL245C	RPN14	P53196	417 aa		4.11	□□□□□ -1.75
CWC25	YNL245C	SPP2	Q02521	185 aa		4.11	□□□□□ -1.75
CWC25	YNL245C	CDD1	Q06549	142 aa		4.11	□□□□□ -1.75
CWC25	YNL245C	RPL40A	P0CH08	128 aa	Known RBP	4.1	□□□□□ -1.75
CWC25	YNL245C	RPL40B	P0CH09	128 aa	Known RBP	4.1	□□□□□ -1.75
CWC25	YNL245C	CPT1	P17898	393 aa		4.1	□□□□□ -1.75
CWC25	YNL245C	YCR025C	P25352	136 aa		4.1	□□□□□ -1.75
CWC25	YNL245C	KDX1	P36005	433 aa		4.1	□□□□□ -1.75
CWC25	YNL245C	AIM29	P36154	155 aa		4.1	□□□□□ -1.75
CWC25	YNL245C	ASP1	P38986	381 aa	Predicted RBP	4.1	□□□□□ -1.75
CWC25	YNL245C	YIL012W	P40551	113 aa		4.1	□□□□□ -1.75
CWC25	YNL245C	MRX5	P47007	382 aa		4.1	□□□□□ -1.75
CWC25	YNL245C	SMD1	Q02260	146 aa	Predicted RBP	4.1	□□□□□ -1.75
CWC25	YNL245C	YMR209C	Q03648	457 aa		4.1	□□□□□ -1.75
CWC25	YNL245C	YOR114W	Q12219	294 aa		4.1	□□□□□ -1.75
CWC25	YNL245C	GIS3	Q12418	502 aa		4.1	□□□□□ -1.75
CWC25	YNL245C	MSB2	P32334	1306 aa		4.1	□□□□□ -1.75
CWC25	YNL245C	RPL22A	P05749	121 aa	Known RBP	4.09	□□□□□ -1.75
CWC25	YNL245C	VPH2	P32341	215 aa		4.09	□□□□□ -1.75
CWC25	YNL245C	GCG1	P32656	232 aa	Known RBP	4.09	□□□□□ -1.75
CWC25	YNL245C	EDC2	P40023	145 aa	Predicted RBP	4.09	□□□□□ -1.75
CWC25	YNL245C	ASG7	P46993	209 aa		4.09	□□□□□ -1.75
CWC25	YNL245C	HSH155	P49955	971 aa	Known RBP	4.09	□□□□□ -1.75
CWC25	YNL245C	CPD1	P53314	239 aa		4.09	□□□□□ -1.75
CWC25	YNL245C	YNL040W	P53960	456 aa	Predicted RBP	4.09	□□□□□ -1.75
CWC25	YNL245C	ACT1	P60010	375 aa	Known RBP	4.09	□□□□□ -1.75
CWC25	YNL245C	ARC18	Q05933	178 aa	Known RBP	4.09	□□□□□ -1.75
CWC25	YNL245C	DAL81	P21657	970 aa		4.08	□□□□□ -1.76
CWC25	YNL245C	AEP1	P32493	518 aa		4.08	□□□□□ -1.76
CWC25	YNL245C	TKL2	P33315	681 aa		4.08	□□□□□ -1.76
CWC25	YNL245C	MBA1	P38300	278 aa		4.08	□□□□□ -1.76
CWC25	YNL245C	YFL064C	P43540	174 aa		4.08	□□□□□ -1.76
CWC25	YNL245C	TPN1	P53099	579 aa		4.08	□□□□□ -1.76
CWC25	YNL245C	GPM2	Q12008	311 aa		4.08	□□□□□ -1.76
CWC25	YNL245C	LAA1	P39526	2014 aa		4.07	□□□□□ -1.76
CWC25	YNL245C	CUP2	P15315	225 aa		4.07	□□□□□ -1.76
CWC25	YNL245C	CDC42	P19073	191 aa		4.07	□□□□□ -1.76
CWC25	YNL245C	IMP1	P28627	190 aa		4.07	□□□□□ -1.76
CWC25	YNL245C	TPS2	P31688	896 aa	Known RBP	4.07	□□□□□ -1.76
CWC25	YNL245C	RCY1	P39531	840 aa		4.07	□□□□□ -1.76
CWC25	YNL245C	PRP24	P49960	444 aa	Known RBP	4.07	□□□□□ -1.76
CWC25	YNL245C	TIM8	P57744	87 aa		4.07	□□□□□ -1.76
CWC25	YNL245C	VBA1	Q04301	562 aa		4.07	□□□□□ -1.76
CWC25	YNL245C	YLL007C	Q07799	665 aa		4.07	□□□□□ -1.76
CWC25	YNL245C	YAL063C-A	Q3E791	96 aa		4.07	□□□□□ -1.76
CWC25	YNL245C	SUA5	P32579	426 aa		4.06	□□□□□ -1.76
CWC25	YNL245C	MRPL3	P36516	390 aa		4.06	□□□□□ -1.76
CWC25	YNL245C	KRE29	P40026	464 aa		4.06	□□□□□ -1.76
CWC25	YNL245C	YPL113C	Q02961	396 aa		4.06	□□□□□ -1.76
CWC25	YNL245C	YML018C	Q03730	393 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms