RNA–Protein interactions for RNA: YNL082W

PMS1, Transcript of ATP-binding protein required for mismatch repair, yeast

Gene PMS1, Length 2,622 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMS1	YNL082W	EAF6	P47128	113 aa		3.23	□□□□□ -1.89
PMS1	YNL082W	RAD17	P48581	401 aa		3.23	□□□□□ -1.89
PMS1	YNL082W	HIS1	P00498	297 aa	Known RBP	3.22	□□□□□ -1.89
PMS1	YNL082W	PRR1	P28708	518 aa		3.22	□□□□□ -1.89
PMS1	YNL082W	HOM6	P31116	359 aa	Known RBP	3.22	□□□□□ -1.89
PMS1	YNL082W	WSC4	P38739	605 aa		3.22	□□□□□ -1.89
PMS1	YNL082W	ADH1	P00330	348 aa	Known RBP	3.22	□□□□□ -1.89
PMS1	YNL082W	CDC36	P06100	191 aa	Predicted RBP	3.22	□□□□□ -1.89
PMS1	YNL082W	SHE3	P38272	425 aa	Known RBP	3.22	□□□□□ -1.89
PMS1	YNL082W	AVT7	P40501	490 aa		3.22	□□□□□ -1.89
PMS1	YNL082W	IGD1	P43598	195 aa		3.22	□□□□□ -1.89
PMS1	YNL082W	EBS1	Q03466	884 aa	Known RBP	3.22	□□□□□ -1.89
PMS1	YNL082W	SPO77	Q06134	477 aa		3.22	□□□□□ -1.89
PMS1	YNL082W	TMC1	Q08422	150 aa	Predicted RBP	3.22	□□□□□ -1.89
PMS1	YNL082W	WTM1	Q12363	437 aa	Known RBP	3.22	□□□□□ -1.89
PMS1	YNL082W	COS2	P0CX12	379 aa		3.21	□□□□□ -1.9
PMS1	YNL082W	COS3	P0CX13	379 aa		3.21	□□□□□ -1.9
PMS1	YNL082W	RPB4	P20433	221 aa	Predicted RBP	3.21	□□□□□ -1.9
PMS1	YNL082W	BMH2	P34730	273 aa	Known RBP	3.21	□□□□□ -1.9
PMS1	YNL082W	AIM29	P36154	155 aa		3.21	□□□□□ -1.9
PMS1	YNL082W	COS4	P43542	379 aa		3.21	□□□□□ -1.9
PMS1	YNL082W	FMP41	P53889	259 aa	Known RBP	3.21	□□□□□ -1.9
PMS1	YNL082W	YPL113C	Q02961	396 aa		3.21	□□□□□ -1.9
PMS1	YNL082W	API2	Q04413	109 aa		3.21	□□□□□ -1.9
PMS1	YNL082W	LIP2	Q06005	328 aa		3.21	□□□□□ -1.9
PMS1	YNL082W	SHC1	P39000	512 aa		3.21	□□□□□ -1.9
PMS1	YNL082W	RPC17	P47076	161 aa		3.21	□□□□□ -1.9
PMS1	YNL082W	VEL1	P53058	206 aa		3.21	□□□□□ -1.9
PMS1	YNL082W	FMP48	P53233	369 aa		3.21	□□□□□ -1.9
PMS1	YNL082W	MHR1	Q06630	226 aa		3.21	□□□□□ -1.9
PMS1	YNL082W	COX4	P04037	155 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	ASP3-2	P0CX77	362 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	ASP3-3	P0CX78	362 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	ASP3-4	P0CX79	362 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	ASP3-1	P0CZ17	362 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	BGL2	P15703	313 aa	Known RBP	3.2	□□□□□ -1.9
PMS1	YNL082W	ASG7	P46993	209 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	CWC21	Q03375	135 aa	Known RBP	3.2	□□□□□ -1.9
PMS1	YNL082W	VPS60	Q03390	229 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	VHS1	Q03785	461 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	YPL245W	Q12179	454 aa	Known RBP	3.2	□□□□□ -1.9
PMS1	YNL082W	CUP1-1	P0CX80	61 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	CUP1-2	P0CX81	61 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	YKL071W	P36086	256 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	DBP7	P36120	742 aa	Known RBP	3.2	□□□□□ -1.9
PMS1	YNL082W	YJR079W	P47126	109 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	YNL095C	P53932	642 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	TLG1	Q03322	224 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	YML018C	Q03730	393 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	DCR2	Q05924	578 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	COQ10	Q08058	207 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	CSM4	Q08955	156 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	HMS1	Q12398	434 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	YAL067W-A	Q8TGK6	75 aa		3.2	□□□□□ -1.9
PMS1	YNL082W	YCR102C	P25608	368 aa		3.19	□□□□□ -1.9
PMS1	YNL082W	SOL2	P37262	315 aa		3.19	□□□□□ -1.9
PMS1	YNL082W	YHL049C	P38722	271 aa		3.19	□□□□□ -1.9
PMS1	YNL082W	YGL034C	P53186	121 aa		3.19	□□□□□ -1.9
PMS1	YNL082W	NRM1	P53718	249 aa		3.19	□□□□□ -1.9
PMS1	YNL082W	PGA2	P53903	129 aa		3.19	□□□□□ -1.9
PMS1	YNL082W	YLR152C	P54072	576 aa		3.19	□□□□□ -1.9
PMS1	YNL082W	UTP15	Q04305	513 aa	Known RBP	3.19	□□□□□ -1.9
PMS1	YNL082W	DTD1	Q07648	150 aa	Known RBP	3.19	□□□□□ -1.9
PMS1	YNL082W	SRO7	Q12038	1033 aa		3.19	□□□□□ -1.9
PMS1	YNL082W	YAL064W-B	O13512	126 aa		3.19	□□□□□ -1.9
PMS1	YNL082W	TPI1	P00942	248 aa	Known RBP	3.19	□□□□□ -1.9
PMS1	YNL082W	CDC13	P32797	924 aa	Known RBP	3.19	□□□□□ -1.9
PMS1	YNL082W	RIB1	P38066	345 aa		3.19	□□□□□ -1.9
PMS1	YNL082W	BMT2	P38278	337 aa		3.19	□□□□□ -1.9
PMS1	YNL082W	RPL10	P41805	221 aa	Known RBP	3.19	□□□□□ -1.9
PMS1	YNL082W	HSH155	P49955	971 aa	Known RBP	3.19	□□□□□ -1.9
PMS1	YNL082W	RPL21A	Q02753	160 aa	Known RBP	3.19	□□□□□ -1.9
PMS1	YNL082W	INP1	Q03694	420 aa		3.19	□□□□□ -1.9
PMS1	YNL082W	PLB3	Q08108	686 aa		3.19	□□□□□ -1.9
PMS1	YNL082W	RFT1	P38206	574 aa	Predicted RBP	3.18	□□□□□ -1.9
PMS1	YNL082W	RNH201	P53942	307 aa		3.18	□□□□□ -1.9
PMS1	YNL082W	SEC10	Q06245	871 aa		3.18	□□□□□ -1.9
PMS1	YNL082W	CTR3	Q06686	241 aa		3.18	□□□□□ -1.9
PMS1	YNL082W	TIR4	Q12218	487 aa	Predicted RBP	3.18	□□□□□ -1.9
PMS1	YNL082W	RRP42	Q12277	265 aa	Predicted RBP	3.18	□□□□□ -1.9
PMS1	YNL082W	AI5_BETA	Q9ZZX0	354 aa		3.18	□□□□□ -1.9
PMS1	YNL082W	REV1	P12689	985 aa		3.18	□□□□□ -1.9
PMS1	YNL082W	COX10	P21592	462 aa		3.18	□□□□□ -1.9
PMS1	YNL082W	APA2	P22108	325 aa		3.18	□□□□□ -1.9
PMS1	YNL082W	YKL075C	P36083	450 aa		3.18	□□□□□ -1.9
PMS1	YNL082W	YGL039W	P53183	348 aa	Known RBP	3.18	□□□□□ -1.9
PMS1	YNL082W	PIN3	Q06449	215 aa		3.18	□□□□□ -1.9
PMS1	YNL082W	YOL029C	Q08187	201 aa		3.18	□□□□□ -1.9
PMS1	YNL082W	RPS24A	P0CX31	135 aa	Known RBP	3.17	□□□□□ -1.9
PMS1	YNL082W	RPS24B	P0CX32	135 aa	Known RBP	3.17	□□□□□ -1.9
PMS1	YNL082W	PBN1	P25580	416 aa		3.17	□□□□□ -1.9
PMS1	YNL082W	ZRT3	P34240	503 aa		3.17	□□□□□ -1.9
PMS1	YNL082W	JEN1	P36035	616 aa		3.17	□□□□□ -1.9
PMS1	YNL082W	GGC1	P38988	300 aa		3.17	□□□□□ -1.9
PMS1	YNL082W	PRE5	P40302	234 aa	Known RBP	3.17	□□□□□ -1.9
PMS1	YNL082W	SNM1	P40993	198 aa		3.17	□□□□□ -1.9
PMS1	YNL082W	HIT1	P46973	164 aa		3.17	□□□□□ -1.9
PMS1	YNL082W	CPR7	P47103	393 aa		3.17	□□□□□ -1.9
PMS1	YNL082W	MRPS16	Q02608	121 aa		3.17	□□□□□ -1.9
PMS1	YNL082W	YMR010W	Q03687	405 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms