RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W MIX17Q03667 156 aa1.62□□□□□ -2.15
PEP8YJL053W OST6Q03723 332 aa1.62□□□□□ -2.15
PEP8YJL053W ATC1Q04005 294 aa1.62□□□□□ -2.15
PEP8YJL053W COX20Q04935 205 aa1.62□□□□□ -2.15
PEP8YJL053W SLD7Q08457 257 aa1.62□□□□□ -2.15
PEP8YJL053W SMT3Q12306 101 aaKnown RBP1.62□□□□□ -2.15
PEP8YJL053W IRC20Q06554 1556 aa1.61□□□□□ -2.15
PEP8YJL053W COX2P00410 251 aa1.61□□□□□ -2.15
PEP8YJL053W RPP0P05317 312 aaKnown RBP1.61□□□□□ -2.15
PEP8YJL053W CWP1P28319 239 aa1.61□□□□□ -2.15
PEP8YJL053W COY1P34237 679 aa1.61□□□□□ -2.15
PEP8YJL053W MAL32P38158 584 aa1.61□□□□□ -2.15
PEP8YJL053W MEP1P40260 492 aa1.61□□□□□ -2.15
PEP8YJL053W DSN1P40568 576 aa1.61□□□□□ -2.15
PEP8YJL053W RPL10P41805 221 aaKnown RBP1.61□□□□□ -2.15
PEP8YJL053W AGX1P43567 385 aa1.61□□□□□ -2.15
PEP8YJL053W NBP35P52920 328 aa1.61□□□□□ -2.15
PEP8YJL053W MAL12P53341 584 aa1.61□□□□□ -2.15
PEP8YJL053W AAH1P53909 347 aa1.61□□□□□ -2.15
PEP8YJL053W SWS2P53937 143 aa1.61□□□□□ -2.15
PEP8YJL053W YDR209CQ03480 137 aa1.61□□□□□ -2.15
PEP8YJL053W LOA1Q06508 300 aa1.61□□□□□ -2.15
PEP8YJL053W BTS1Q12051 335 aa1.61□□□□□ -2.15
PEP8YJL053W TY3A-GQ12173 290 aa1.61□□□□□ -2.15
PEP8YJL053W PST1Q12355 444 aa1.61□□□□□ -2.15
PEP8YJL053W TY3A-IQ99219 290 aa1.61□□□□□ -2.15
PEP8YJL053W BNI1P41832 1953 aa1.61□□□□□ -2.15
PEP8YJL053W VPS3P23643 1011 aa1.6□□□□□ -2.15
PEP8YJL053W RNP1P32385 249 aa1.6□□□□□ -2.15
PEP8YJL053W PRS2P38620 318 aaKnown RBP1.6□□□□□ -2.15
PEP8YJL053W YER188WP40103 239 aa1.6□□□□□ -2.15
PEP8YJL053W YJL028WP47062 111 aa1.6□□□□□ -2.15
PEP8YJL053W MAL13P53338 473 aa1.6□□□□□ -2.15
PEP8YJL053W SSU72P53538 206 aaPredicted RBP1.6□□□□□ -2.15
PEP8YJL053W CDC14Q00684 551 aa1.6□□□□□ -2.15
PEP8YJL053W YMR166CQ03829 368 aa1.6□□□□□ -2.15
PEP8YJL053W FCF1Q05498 189 aaPredicted RBP1.6□□□□□ -2.15
PEP8YJL053W SPO77Q06134 477 aa1.6□□□□□ -2.15
PEP8YJL053W KAP95Q06142 861 aaKnown RBP1.6□□□□□ -2.15
PEP8YJL053W ATG17Q06410 417 aa1.6□□□□□ -2.15
PEP8YJL053W YPL119C-AQ3E751 87 aa1.6□□□□□ -2.15
PEP8YJL053W YBL112CQ3E7Y4 105 aa1.6□□□□□ -2.15
PEP8YJL053W POX1P13711 748 aa1.59□□□□□ -2.15
PEP8YJL053W SSH1P38353 490 aaKnown RBP1.59□□□□□ -2.15
PEP8YJL053W YHL049CP38722 271 aa1.59□□□□□ -2.15
PEP8YJL053W YHR045WP38775 560 aa1.59□□□□□ -2.15
PEP8YJL053W YAR1P46683 200 aa1.59□□□□□ -2.15
PEP8YJL053W YJL118WP47022 219 aa1.59□□□□□ -2.15
PEP8YJL053W RGM1Q00453 211 aa1.59□□□□□ -2.15
PEP8YJL053W EBS1Q03466 884 aaKnown RBP1.59□□□□□ -2.15
PEP8YJL053W MYO5Q04439 1219 aaKnown RBP1.59□□□□□ -2.15
PEP8YJL053W BOP2Q06150 570 aa1.59□□□□□ -2.15
PEP8YJL053W RRP36Q12481 300 aaPredicted RBP1.59□□□□□ -2.15
PEP8YJL053W AGC1Q12482 902 aa1.59□□□□□ -2.15
PEP8YJL053W SNF8Q12483 233 aa1.59□□□□□ -2.15
PEP8YJL053W YPL247CQ12523 523 aa1.59□□□□□ -2.15
PEP8YJL053W RPL26AP05743 127 aaKnown RBP1.58□□□□□ -2.16
PEP8YJL053W RAD10P06838 210 aa1.58□□□□□ -2.16
PEP8YJL053W RSR1P13856 272 aa1.58□□□□□ -2.16
PEP8YJL053W TOM40P23644 387 aaKnown RBP1.58□□□□□ -2.16
PEP8YJL053W RNA15P25299 296 aaPredicted RBP1.58□□□□□ -2.16
PEP8YJL053W CLB6P32943 380 aa1.58□□□□□ -2.16
PEP8YJL053W YUH1P35127 236 aa1.58□□□□□ -2.16
PEP8YJL053W FZO1P38297 855 aa1.58□□□□□ -2.16
PEP8YJL053W DSK2P48510 373 aa1.58□□□□□ -2.16
PEP8YJL053W RPL26BP53221 127 aaKnown RBP1.58□□□□□ -2.16
PEP8YJL053W ASI3P53983 676 aa1.58□□□□□ -2.16
PEP8YJL053W GRH1Q04410 372 aaKnown RBP1.58□□□□□ -2.16
PEP8YJL053W YMR114CQ04471 368 aaKnown RBP1.58□□□□□ -2.16
PEP8YJL053W YDR124WQ04608 324 aa1.58□□□□□ -2.16
PEP8YJL053W YPR147CQ06522 304 aaKnown RBP1.58□□□□□ -2.16
PEP8YJL053W DNF1P32660 1571 aa1.57□□□□□ -2.16
PEP8YJL053W COS2P0CX12 379 aa1.57□□□□□ -2.16
PEP8YJL053W COS3P0CX13 379 aa1.57□□□□□ -2.16
PEP8YJL053W POL30P15873 258 aaKnown RBP1.57□□□□□ -2.16
PEP8YJL053W PPH21P23594 369 aa1.57□□□□□ -2.16
PEP8YJL053W QRI5P32344 111 aa1.57□□□□□ -2.16
PEP8YJL053W GDH2P33327 1092 aaKnown RBP1.57□□□□□ -2.16
PEP8YJL053W ECM13P38195 257 aa1.57□□□□□ -2.16
PEP8YJL053W COG3P40094 801 aa1.57□□□□□ -2.16
PEP8YJL053W GON7P46984 123 aa1.57□□□□□ -2.16
PEP8YJL053W PIR5P46999 287 aa1.57□□□□□ -2.16
PEP8YJL053W YJL016WP47072 561 aa1.57□□□□□ -2.16
PEP8YJL053W NBP1P52919 319 aaPredicted RBP1.57□□□□□ -2.16
PEP8YJL053W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
PEP8YJL053W GOT1Q03554 138 aa1.57□□□□□ -2.16
PEP8YJL053W YPR098CQ06089 161 aa1.57□□□□□ -2.16
PEP8YJL053W CTS2Q06350 511 aa1.57□□□□□ -2.16
PEP8YJL053W PLB3Q08108 686 aa1.57□□□□□ -2.16
PEP8YJL053W RRP40Q08285 240 aaKnown RBP1.57□□□□□ -2.16
PEP8YJL053W YOR268CQ08734 132 aa1.57□□□□□ -2.16
PEP8YJL053W YOL107WQ12239 342 aa1.57□□□□□ -2.16
PEP8YJL053W YBL008W-AQ3E821 79 aa1.57□□□□□ -2.16
PEP8YJL053W REV3P14284 1504 aa1.56□□□□□ -2.16
PEP8YJL053W TCB3Q03640 1545 aaKnown RBP1.56□□□□□ -2.16
PEP8YJL053W MSF1P08425 469 aa1.56□□□□□ -2.16
PEP8YJL053W DPM1P14020 267 aaKnown RBP1.56□□□□□ -2.16
PEP8YJL053W SNF6P18888 332 aa1.56□□□□□ -2.16
PEP8YJL053W MRPL39P36533 70 aa1.56□□□□□ -2.16
PEP8YJL053W PRS4P38063 326 aaPredicted RBP1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms