RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C YER188WP40103 239 aa2.19□□□□□ -2.06
CTK2YJL006C SYF2P53277 215 aaPredicted RBP2.19□□□□□ -2.06
CTK2YJL006C YPL039WQ03080 316 aa2.19□□□□□ -2.06
CTK2YJL006C FCF1Q05498 189 aaPredicted RBP2.19□□□□□ -2.06
CTK2YJL006C PER33Q12144 273 aa2.19□□□□□ -2.06
CTK2YJL006C YBL112CQ3E7Y4 105 aa2.19□□□□□ -2.06
CTK2YJL006C ISD11Q6Q560 94 aa2.19□□□□□ -2.06
CTK2YJL006C RRT12P25381 491 aa2.18□□□□□ -2.06
CTK2YJL006C POF1P25576 258 aa2.18□□□□□ -2.06
CTK2YJL006C CSG2P35206 410 aa2.18□□□□□ -2.06
CTK2YJL006C ATG12P38316 186 aa2.18□□□□□ -2.06
CTK2YJL006C HSM3P38348 480 aa2.18□□□□□ -2.06
CTK2YJL006C SER33P40510 469 aa2.18□□□□□ -2.06
CTK2YJL006C PIR5P46999 287 aa2.18□□□□□ -2.06
CTK2YJL006C ARV1Q06541 321 aa2.18□□□□□ -2.06
CTK2YJL006C YOS9Q99220 542 aa2.18□□□□□ -2.06
CTK2YJL006C PAN1P32521 1480 aa2.18□□□□□ -2.06
CTK2YJL006C NUP170P38181 1502 aa2.17□□□□□ -2.06
CTK2YJL006C YEL009C-AA0A023PZF2 135 aa2.17□□□□□ -2.06
CTK2YJL006C RPP0P05317 312 aaKnown RBP2.17□□□□□ -2.06
CTK2YJL006C RPL4AP10664 362 aaKnown RBP2.17□□□□□ -2.06
CTK2YJL006C ARN2P38724 620 aa2.17□□□□□ -2.06
CTK2YJL006C RTT105P40063 208 aa2.17□□□□□ -2.06
CTK2YJL006C RPL4BP49626 362 aaKnown RBP2.17□□□□□ -2.06
CTK2YJL006C NBP35P52920 328 aa2.17□□□□□ -2.06
CTK2YJL006C TIM21P53220 239 aa2.17□□□□□ -2.06
CTK2YJL006C MNT4P53745 580 aa2.17□□□□□ -2.06
CTK2YJL006C GMC2Q06201 188 aa2.17□□□□□ -2.06
CTK2YJL006C AI5_BETAQ9ZZX0 354 aa2.17□□□□□ -2.06
CTK2YJL006C NUP157P40064 1391 aaKnown RBP2.17□□□□□ -2.06
CTK2YJL006C SCC2Q04002 1493 aa2.17□□□□□ -2.06
CTK2YJL006C CHC1P22137 1653 aaKnown RBP2.16□□□□□ -2.06
CTK2YJL006C COS2P0CX12 379 aa2.16□□□□□ -2.06
CTK2YJL006C COS3P0CX13 379 aa2.16□□□□□ -2.06
CTK2YJL006C OM45P16547 393 aa2.16□□□□□ -2.06
CTK2YJL006C TOM40P23644 387 aaKnown RBP2.16□□□□□ -2.06
CTK2YJL006C COY1P34237 679 aa2.16□□□□□ -2.06
CTK2YJL006C NPT1P39683 429 aaKnown RBP2.16□□□□□ -2.06
CTK2YJL006C YJR141WP47172 347 aaPredicted RBP2.16□□□□□ -2.06
CTK2YJL006C SWS2P53937 143 aa2.16□□□□□ -2.06
CTK2YJL006C YOL019WQ08157 551 aa2.16□□□□□ -2.06
CTK2YJL006C AGC1Q12482 902 aa2.16□□□□□ -2.06
CTK2YJL006C UFD4P33202 1483 aa2.15□□□□□ -2.06
CTK2YJL006C MET16P18408 261 aaPredicted RBP2.15□□□□□ -2.07
CTK2YJL006C BMH1P29311 267 aaKnown RBP2.15□□□□□ -2.07
CTK2YJL006C MED6P38782 295 aa2.15□□□□□ -2.07
CTK2YJL006C SHC1P39000 512 aa2.15□□□□□ -2.07
CTK2YJL006C TAD2P47058 250 aa2.15□□□□□ -2.07
CTK2YJL006C KAP114P53067 1004 aa2.15□□□□□ -2.07
CTK2YJL006C CTS2Q06350 511 aa2.15□□□□□ -2.07
CTK2YJL006C CDD1Q06549 142 aa2.15□□□□□ -2.07
CTK2YJL006C NOT5Q12514 560 aaPredicted RBP2.15□□□□□ -2.07
CTK2YJL006C ARO1P08566 1588 aaKnown RBP2.15□□□□□ -2.07
CTK2YJL006C RIB7P33312 244 aa2.14□□□□□ -2.07
CTK2YJL006C PET100P38958 111 aa2.14□□□□□ -2.07
CTK2YJL006C EMC2P47133 292 aaKnown RBP2.14□□□□□ -2.07
CTK2YJL006C SSU72P53538 206 aaPredicted RBP2.14□□□□□ -2.07
CTK2YJL006C RGM1Q00453 211 aa2.14□□□□□ -2.07
CTK2YJL006C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
CTK2YJL006C YMR166CQ03829 368 aa2.14□□□□□ -2.07
CTK2YJL006C ATC1Q04005 294 aa2.14□□□□□ -2.07
CTK2YJL006C CTR3Q06686 241 aa2.14□□□□□ -2.07
CTK2YJL006C SMT3Q12306 101 aaKnown RBP2.14□□□□□ -2.07
CTK2YJL006C SME1Q12330 94 aaPredicted RBP2.14□□□□□ -2.07
CTK2YJL006C ESP1Q03018 1630 aa2.13□□□□□ -2.07
CTK2YJL006C SEN1Q00416 2231 aaKnown RBP2.13□□□□□ -2.07
CTK2YJL006C DPM1P14020 267 aaKnown RBP2.13□□□□□ -2.07
CTK2YJL006C CLB6P32943 380 aa2.13□□□□□ -2.07
CTK2YJL006C YHL049CP38722 271 aa2.13□□□□□ -2.07
CTK2YJL006C SPT8P38915 602 aa2.13□□□□□ -2.07
CTK2YJL006C RCY1P39531 840 aa2.13□□□□□ -2.07
CTK2YJL006C COA1P40452 197 aa2.13□□□□□ -2.07
CTK2YJL006C NIF3P53081 288 aa2.13□□□□□ -2.07
CTK2YJL006C SLX9P53251 210 aaPredicted RBP2.13□□□□□ -2.07
CTK2YJL006C YOR268CQ08734 132 aa2.13□□□□□ -2.07
CTK2YJL006C RRP36Q12481 300 aaPredicted RBP2.13□□□□□ -2.07
CTK2YJL006C RPL24AP04449 155 aaKnown RBP2.12□□□□□ -2.07
CTK2YJL006C RAD10P06838 210 aa2.12□□□□□ -2.07
CTK2YJL006C SNF6P18888 332 aa2.12□□□□□ -2.07
CTK2YJL006C SFC1P33303 322 aa2.12□□□□□ -2.07
CTK2YJL006C MRPL37P36532 105 aa2.12□□□□□ -2.07
CTK2YJL006C YHR045WP38775 560 aa2.12□□□□□ -2.07
CTK2YJL006C PRM9P39551 298 aa2.12□□□□□ -2.07
CTK2YJL006C AGX1P43567 385 aa2.12□□□□□ -2.07
CTK2YJL006C GRH1Q04410 372 aaKnown RBP2.12□□□□□ -2.07
CTK2YJL006C RDS3Q06835 107 aaPredicted RBP2.12□□□□□ -2.07
CTK2YJL006C YPL247CQ12523 523 aa2.12□□□□□ -2.07
CTK2YJL006C ULS1Q08562 1619 aa2.12□□□□□ -2.07
CTK2YJL006C SSK22P25390 1331 aaPredicted RBP2.12□□□□□ -2.07
CTK2YJL006C SPO14P36126 1683 aa2.12□□□□□ -2.07
CTK2YJL006C GDB1Q06625 1536 aa2.12□□□□□ -2.07
CTK2YJL006C HIS1P00498 297 aaKnown RBP2.11□□□□□ -2.07
CTK2YJL006C RPL26AP05743 127 aaKnown RBP2.11□□□□□ -2.07
CTK2YJL006C DPB2P24482 689 aaPredicted RBP2.11□□□□□ -2.07
CTK2YJL006C TEM1P38987 245 aa2.11□□□□□ -2.07
CTK2YJL006C DDI1P40087 428 aa2.11□□□□□ -2.07
CTK2YJL006C YJL028WP47062 111 aa2.11□□□□□ -2.07
CTK2YJL006C RPL26BP53221 127 aaKnown RBP2.11□□□□□ -2.07
CTK2YJL006C MAL13P53338 473 aa2.11□□□□□ -2.07
CTK2YJL006C AAH1P53909 347 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 46.9 ms