RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A FRE8Q12209 686 aa2.62□□□□□ -1.99
EFG1YGR271C-A TFC7Q12415 435 aa2.62□□□□□ -1.99
EFG1YGR271C-A EAF3Q12432 401 aa2.62□□□□□ -1.99
EFG1YGR271C-A BI3Q9ZZW7 517 aa2.62□□□□□ -1.99
EFG1YGR271C-A RPL23AP0CX41 137 aaKnown RBP2.61□□□□□ -1.99
EFG1YGR271C-A RPL23BP0CX42 137 aaKnown RBP2.61□□□□□ -1.99
EFG1YGR271C-A CAF4P36130 643 aa2.61□□□□□ -1.99
EFG1YGR271C-A DRE2P36152 348 aa2.61□□□□□ -1.99
EFG1YGR271C-A YCR087C-AP37263 153 aa2.61□□□□□ -1.99
EFG1YGR271C-A YBR096WP38256 230 aa2.61□□□□□ -1.99
EFG1YGR271C-A ATG12P38316 186 aa2.61□□□□□ -1.99
EFG1YGR271C-A MAM33P40513 266 aa2.61□□□□□ -1.99
EFG1YGR271C-A YKE4P40544 346 aa2.61□□□□□ -1.99
EFG1YGR271C-A YPS5P53057 165 aa2.61□□□□□ -1.99
EFG1YGR271C-A ALG13P53178 202 aa2.61□□□□□ -1.99
EFG1YGR271C-A SWS2P53937 143 aa2.61□□□□□ -1.99
EFG1YGR271C-A YLR460CP54007 376 aa2.61□□□□□ -1.99
EFG1YGR271C-A GMC1Q04399 608 aa2.61□□□□□ -1.99
EFG1YGR271C-A PEX30Q06169 523 aa2.61□□□□□ -1.99
EFG1YGR271C-A YDL114WQ07530 308 aa2.61□□□□□ -1.99
EFG1YGR271C-A FOL3Q12676 427 aaPredicted RBP2.61□□□□□ -1.99
EFG1YGR271C-A YPL119C-AQ3E751 87 aa2.61□□□□□ -1.99
EFG1YGR271C-A YAL064W-BO13512 126 aa2.6□□□□□ -1.99
EFG1YGR271C-A PET494P07390 489 aaPredicted RBP2.6□□□□□ -1.99
EFG1YGR271C-A PUT1P09368 476 aa2.6□□□□□ -1.99
EFG1YGR271C-A AAT2P23542 418 aaKnown RBP2.6□□□□□ -1.99
EFG1YGR271C-A CHA1P25379 360 aaKnown RBP2.6□□□□□ -1.99
EFG1YGR271C-A FUN26P31381 517 aa2.6□□□□□ -1.99
EFG1YGR271C-A SRP102P36057 244 aaPredicted RBP2.6□□□□□ -1.99
EFG1YGR271C-A KRE29P40026 464 aa2.6□□□□□ -1.99
EFG1YGR271C-A YER186CP40101 306 aa2.6□□□□□ -1.99
EFG1YGR271C-A YIL029CP40538 142 aa2.6□□□□□ -1.99
EFG1YGR271C-A LCB3P47013 409 aa2.6□□□□□ -1.99
EFG1YGR271C-A NBP35P52920 328 aa2.6□□□□□ -1.99
EFG1YGR271C-A MMS2P53152 137 aa2.6□□□□□ -1.99
EFG1YGR271C-A FYV6P53913 173 aa2.6□□□□□ -1.99
EFG1YGR271C-A SUR7P54003 302 aa2.6□□□□□ -1.99
EFG1YGR271C-A RHO3Q00245 231 aaKnown RBP2.6□□□□□ -1.99
EFG1YGR271C-A YML018CQ03730 393 aa2.6□□□□□ -1.99
EFG1YGR271C-A ECM11Q04110 302 aa2.6□□□□□ -1.99
EFG1YGR271C-A YET2Q04210 160 aa2.6□□□□□ -1.99
EFG1YGR271C-A NNT1Q05874 261 aa2.6□□□□□ -1.99
EFG1YGR271C-A YNG1Q08465 219 aa2.6□□□□□ -1.99
EFG1YGR271C-A FCY22Q12119 530 aa2.6□□□□□ -1.99
EFG1YGR271C-A YDL199CQ12407 687 aa2.6□□□□□ -1.99
EFG1YGR271C-A SIR4P11978 1358 aa2.6□□□□□ -1.99
EFG1YGR271C-A PSK1P31374 1356 aa2.6□□□□□ -1.99
EFG1YGR271C-A RPS18AP0CX55 146 aaKnown RBP2.59□□□□□ -1.99
EFG1YGR271C-A RPS18BP0CX56 146 aaPredicted RBP2.59□□□□□ -1.99
EFG1YGR271C-A ZWF1P11412 505 aaKnown RBP2.59□□□□□ -1.99
EFG1YGR271C-A MSI1P13712 422 aa2.59□□□□□ -1.99
EFG1YGR271C-A PPH21P23594 369 aa2.59□□□□□ -1.99
EFG1YGR271C-A MIR1P23641 311 aaKnown RBP2.59□□□□□ -1.99
EFG1YGR271C-A PMT2P31382 759 aa2.59□□□□□ -1.99
EFG1YGR271C-A AEP1P32493 518 aa2.59□□□□□ -1.99
EFG1YGR271C-A DBP7P36120 742 aaKnown RBP2.59□□□□□ -1.99
EFG1YGR271C-A GRE3P38715 327 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99not detected
EFG1YGR271C-A GOS1P38736 223 aa2.59□□□□□ -1.99
EFG1YGR271C-A WSC4P38739 605 aa2.59□□□□□ -1.99
EFG1YGR271C-A YHR127WP38833 243 aaKnown RBP2.59□□□□□ -1.99
EFG1YGR271C-A SER33P40510 469 aa2.59□□□□□ -1.99
EFG1YGR271C-A MOB2P43563 287 aa2.59□□□□□ -1.99
EFG1YGR271C-A YJL016WP47072 561 aa2.59□□□□□ -1.99
EFG1YGR271C-A MCM22P47167 239 aa2.59□□□□□ -1.99
EFG1YGR271C-A OST3P48439 350 aa2.59□□□□□ -1.99
EFG1YGR271C-A TRM9P49957 279 aa2.59□□□□□ -1.99
EFG1YGR271C-A BRR6P53062 197 aa2.59□□□□□ -1.99
EFG1YGR271C-A SNO1Q03144 224 aa2.59□□□□□ -1.99
EFG1YGR271C-A VPS60Q03390 229 aa2.59□□□□□ -1.99
EFG1YGR271C-A TDA1Q03533 586 aa2.59□□□□□ -1.99
EFG1YGR271C-A FAR10Q06001 478 aa2.59□□□□□ -1.99
EFG1YGR271C-A RIF2Q06208 395 aa2.59□□□□□ -1.99
EFG1YGR271C-A YPR091CQ06833 770 aa2.59□□□□□ -1.99
EFG1YGR271C-A COQ10Q08058 207 aa2.59□□□□□ -1.99
EFG1YGR271C-A MMT2Q08970 484 aa2.59□□□□□ -1.99
EFG1YGR271C-A YPL150WQ12152 901 aa2.59□□□□□ -1.99
EFG1YGR271C-A RFM1Q12192 310 aa2.59□□□□□ -1.99
EFG1YGR271C-A YGK3Q12222 375 aaPredicted RBP2.59□□□□□ -1.99
EFG1YGR271C-A TPO4Q12256 659 aa2.59□□□□□ -1.99
EFG1YGR271C-A MCT1Q12283 360 aa2.59□□□□□ -1.99
EFG1YGR271C-A YLR126CQ12288 251 aa2.59□□□□□ -1.99
EFG1YGR271C-A CBP6P07253 162 aaPredicted RBP2.58□□□□□ -2
EFG1YGR271C-A GCY1P14065 312 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
EFG1YGR271C-A MRPL20P22354 195 aaPredicted RBP2.58□□□□□ -2
EFG1YGR271C-A BMH1P29311 267 aaKnown RBP2.58□□□□□ -2
EFG1YGR271C-A SPS18P32572 300 aa2.58□□□□□ -2
EFG1YGR271C-A SGE1P33335 543 aa2.58□□□□□ -2
EFG1YGR271C-A NUF2P33895 451 aa2.58□□□□□ -2
EFG1YGR271C-A MRPL3P36516 390 aa2.58□□□□□ -2
EFG1YGR271C-A MED8P38304 223 aa2.58□□□□□ -2
EFG1YGR271C-A RCK1P38622 512 aa2.58□□□□□ -2
EFG1YGR271C-A BAT1P38891 393 aaKnown RBP2.58□□□□□ -2
EFG1YGR271C-A PET8P38921 284 aa2.58□□□□□ -2
EFG1YGR271C-A PTI1P39927 425 aaPredicted RBP2.58□□□□□ -2
EFG1YGR271C-A COG3P40094 801 aa2.58□□□□□ -2
EFG1YGR271C-A YJR056CP47115 236 aa2.58□□□□□ -2
EFG1YGR271C-A GTR2P53290 341 aa2.58□□□□□ -2
EFG1YGR271C-A NRK1P53915 240 aa2.58□□□□□ -2
EFG1YGR271C-A PRP38Q00723 242 aaPredicted RBP2.58□□□□□ -2
EFG1YGR271C-A TPS1Q00764 495 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 72.8 ms