RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W RPP2BP02400 110 aaKnown RBP6.85□□□□□ -1.31
SHC1YER096W RPL7AP05737 244 aaKnown RBP6.85□□□□□ -1.31
SHC1YER096W MATALPHA1P0CY06 175 aa6.85□□□□□ -1.31
SHC1YER096W HMLALPHA1P0CY07 175 aa6.85□□□□□ -1.31
SHC1YER096W PET54P10834 293 aa6.85□□□□□ -1.31
SHC1YER096W SPO7P18410 259 aa6.85□□□□□ -1.31
SHC1YER096W ATG22P25568 528 aa6.85□□□□□ -1.31
SHC1YER096W RNP1P32385 249 aa6.85□□□□□ -1.31
SHC1YER096W HYM1P32464 399 aa6.85□□□□□ -1.31
SHC1YER096W RCN1P36054 211 aa6.85□□□□□ -1.31
SHC1YER096W FRM2P37261 193 aa6.85□□□□□ -1.31
SHC1YER096W TAT1P38085 619 aa6.85□□□□□ -1.31
SHC1YER096W AAD14P42884 376 aa6.85□□□□□ -1.31
SHC1YER096W VHT1P53241 593 aa6.85□□□□□ -1.31
SHC1YER096W MRPL13Q02204 264 aa6.85□□□□□ -1.31
SHC1YER096W PEX30Q06169 523 aa6.85□□□□□ -1.31
SHC1YER096W LUC7Q07508 261 aaPredicted RBP6.85□□□□□ -1.31
SHC1YER096W RPL7BQ12213 244 aaKnown RBP6.85□□□□□ -1.31
SHC1YER096W MCT1Q12283 360 aa6.85□□□□□ -1.31
SHC1YER096W COX5BP00425 151 aa6.84□□□□□ -1.31
SHC1YER096W RPS16AP0CX51 143 aaKnown RBP6.84□□□□□ -1.31
SHC1YER096W RPS16BP0CX52 143 aaKnown RBP6.84□□□□□ -1.31
SHC1YER096W DBF20P32328 564 aa6.84□□□□□ -1.31
SHC1YER096W SSH1P38353 490 aaKnown RBP6.84□□□□□ -1.31
SHC1YER096W PUG1P40100 303 aa6.84□□□□□ -1.31
SHC1YER096W SLZ1P40167 298 aa6.84□□□□□ -1.31
SHC1YER096W CTK2P46962 323 aa6.84□□□□□ -1.31
SHC1YER096W NIT3P49954 291 aa6.84□□□□□ -1.31
SHC1YER096W DIE2P50076 525 aa6.84□□□□□ -1.31
SHC1YER096W YGR042WP53227 271 aa6.84□□□□□ -1.31
SHC1YER096W PXR1P53335 271 aaPredicted RBP6.84□□□□□ -1.31
SHC1YER096W YNL165WP53891 406 aa6.84□□□□□ -1.31
SHC1YER096W AAH1P53909 347 aa6.84□□□□□ -1.31
SHC1YER096W RVB1Q03940 463 aaKnown RBP6.84□□□□□ -1.31
SHC1YER096W SCEIP03882 235 aa6.83□□□□□ -1.32
SHC1YER096W ITR1P30605 584 aa6.83□□□□□ -1.32
SHC1YER096W MRPS5P33759 307 aa6.83□□□□□ -1.32
SHC1YER096W SRL3P36167 246 aa6.83□□□□□ -1.32
SHC1YER096W DLS1P40366 167 aa6.83□□□□□ -1.32
SHC1YER096W LOH1P47055 219 aa6.83□□□□□ -1.32
SHC1YER096W MTL1P53214 551 aa6.83□□□□□ -1.32
SHC1YER096W RTC5Q12108 567 aaKnown RBP6.83□□□□□ -1.32
SHC1YER096W YDL180WQ12301 547 aa6.83□□□□□ -1.32
SHC1YER096W NOP56Q12460 504 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
SHC1YER096W GPM1P00950 247 aaKnown RBP6.82□□□□□ -1.32
SHC1YER096W GRX2P17695 143 aaKnown RBP6.82□□□□□ -1.32
SHC1YER096W RPB10P22139 70 aa6.82□□□□□ -1.32
SHC1YER096W YCP4P25349 247 aaKnown RBP6.82□□□□□ -1.32
SHC1YER096W PET18P25362 215 aa6.82□□□□□ -1.32
SHC1YER096W ARO4P32449 370 aaKnown RBP6.82□□□□□ -1.32
SHC1YER096W AGA2P32781 87 aa6.82□□□□□ -1.32
SHC1YER096W PPG1P32838 368 aa6.82□□□□□ -1.32
SHC1YER096W MRPL39P36533 70 aa6.82□□□□□ -1.32
SHC1YER096W TCM62P38228 572 aaKnown RBP6.82□□□□□ -1.32
SHC1YER096W RTT105P40063 208 aa6.82□□□□□ -1.32
SHC1YER096W OTU1P43558 301 aa6.82□□□□□ -1.32
SHC1YER096W ERJ5P43613 295 aaPredicted RBP6.82□□□□□ -1.32
SHC1YER096W MTM1P53320 366 aa6.82□□□□□ -1.32
SHC1YER096W TNA1P53322 534 aa6.82□□□□□ -1.32
SHC1YER096W ISA2Q12425 185 aa6.82□□□□□ -1.32
SHC1YER096W YLR358CO13565 187 aa6.81□□□□□ -1.32
SHC1YER096W RPL3P14126 387 aaKnown RBP6.81□□□□□ -1.32
SHC1YER096W PPQ1P32945 549 aa6.81□□□□□ -1.32
SHC1YER096W YMR262WP38430 313 aa6.81□□□□□ -1.32
SHC1YER096W GPI14P47088 403 aaKnown RBP6.81□□□□□ -1.32
SHC1YER096W RPN14P53196 417 aa6.81□□□□□ -1.32
SHC1YER096W POP6P53218 158 aa6.81□□□□□ -1.32
SHC1YER096W RNH201P53942 307 aa6.81□□□□□ -1.32
SHC1YER096W YAP6Q03935 383 aa6.81□□□□□ -1.32
SHC1YER096W YMR130WQ04223 302 aa6.81□□□□□ -1.32
SHC1YER096W RRI1Q12468 440 aa6.81□□□□□ -1.32
SHC1YER096W FOL3Q12676 427 aaPredicted RBP6.81□□□□□ -1.32
SHC1YER096W SPS2P08459 502 aa6.81□□□□□ -1.32
SHC1YER096W MCM1P11746 286 aa6.81□□□□□ -1.32
SHC1YER096W KRE6P32486 720 aa6.81□□□□□ -1.32
SHC1YER096W SNC2P33328 115 aa6.81□□□□□ -1.32
SHC1YER096W CLG1P35190 452 aa6.81□□□□□ -1.32
SHC1YER096W YBR242WP38331 238 aa6.81□□□□□ -1.32
SHC1YER096W UBX6P47049 396 aa6.81□□□□□ -1.32
SHC1YER096W SCW4P53334 386 aaKnown RBP6.81□□□□□ -1.32
SHC1YER096W ELA1P53861 379 aaPredicted RBP6.81□□□□□ -1.32
SHC1YER096W RRP15Q06511 250 aaPredicted RBP6.81□□□□□ -1.32
SHC1YER096W YDL218WQ07629 317 aa6.81□□□□□ -1.32
SHC1YER096W THI72Q08579 599 aa6.81□□□□□ -1.32
SHC1YER096W HTZ1Q12692 134 aaKnown RBP6.81□□□□□ -1.32
SHC1YER096W ODC2Q99297 307 aa6.81□□□□□ -1.32
SHC1YER096W CDC36P06100 191 aaPredicted RBP6.8□□□□□ -1.32
SHC1YER096W SMB1P40018 196 aaKnown RBP6.8□□□□□ -1.32
SHC1YER096W BXI1P48558 297 aa6.8□□□□□ -1.32
SHC1YER096W YGL159WP53110 370 aa6.8□□□□□ -1.32
SHC1YER096W MRPL19P53875 158 aa6.8□□□□□ -1.32
SHC1YER096W SUR7P54003 302 aa6.8□□□□□ -1.32
SHC1YER096W HHT1P61830 136 aa6.8□□□□□ -1.32
SHC1YER096W MRPS16Q02608 121 aa6.8□□□□□ -1.32
SHC1YER096W CTF19Q02732 369 aa6.8□□□□□ -1.32
SHC1YER096W YDR387CQ04162 555 aa6.8□□□□□ -1.32
SHC1YER096W TY1A-MR1Q04215 440 aa6.8□□□□□ -1.32
SHC1YER096W UTP15Q04305 513 aaKnown RBP6.8□□□□□ -1.32
SHC1YER096W API2Q04413 109 aa6.8□□□□□ -1.32
SHC1YER096W YPR196WQ06595 470 aa6.8□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms