RNA–Protein interactions for RNA: YCL010C

SGF29, Transcript of Component of the HAT/Core module of the SAGA, SLIK, and ADA complexes, yeastyeast

Gene SGF29, Length 780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF29YCL010C RSM23Q01163 450 aa5.48□□□□□ -1.53
SGF29YCL010C SPO19Q03029 223 aa5.48□□□□□ -1.53
SGF29YCL010C DIG2Q03373 323 aaKnown RBP5.48□□□□□ -1.53
SGF29YCL010C GAL83Q04739 417 aa5.48□□□□□ -1.53
SGF29YCL010C YLR283WQ05867 314 aa5.48□□□□□ -1.53
SGF29YCL010C MCM21Q06675 368 aa5.48□□□□□ -1.53
SGF29YCL010C FRE6Q12473 712 aa5.48□□□□□ -1.53
SGF29YCL010C RPS18AP0CX55 146 aaKnown RBP5.47□□□□□ -1.53
SGF29YCL010C RPS18BP0CX56 146 aaPredicted RBP5.47□□□□□ -1.53
SGF29YCL010C MKS1P34072 584 aa5.47□□□□□ -1.53
SGF29YCL010C MCH2P36032 473 aa5.47□□□□□ -1.53
SGF29YCL010C RSM22P36056 628 aa5.47□□□□□ -1.53
SGF29YCL010C YER121WP40076 114 aa5.47□□□□□ -1.53
SGF29YCL010C PHB2P50085 310 aa5.47□□□□□ -1.53
SGF29YCL010C DOC1P53068 250 aa5.47□□□□□ -1.53
SGF29YCL010C YLR152CP54072 576 aa5.47□□□□□ -1.53
SGF29YCL010C YMR279CQ03263 540 aa5.47□□□□□ -1.53
SGF29YCL010C TSR2Q06672 205 aaKnown RBP5.47□□□□□ -1.53
SGF29YCL010C GAT3Q07928 141 aa5.47□□□□□ -1.53
SGF29YCL010C PEX27Q08580 376 aa5.47□□□□□ -1.53
SGF29YCL010C REP2P03872 296 aa5.46□□□□□ -1.54
SGF29YCL010C SCEIP03882 235 aa5.46□□□□□ -1.54
SGF29YCL010C MRP1P10662 321 aaKnown RBP5.46□□□□□ -1.54
SGF29YCL010C MSI1P13712 422 aa5.46□□□□□ -1.54
SGF29YCL010C DAL80P26343 269 aa5.46□□□□□ -1.54
SGF29YCL010C VPS17P32913 551 aa5.46□□□□□ -1.54
SGF29YCL010C ZRT3P34240 503 aa5.46□□□□□ -1.54
SGF29YCL010C YKL107WP34251 309 aa5.46□□□□□ -1.54
SGF29YCL010C TAT1P38085 619 aa5.46□□□□□ -1.54
SGF29YCL010C SDS24P38314 527 aa5.46□□□□□ -1.54
SGF29YCL010C PCL6P40038 420 aa5.46□□□□□ -1.54
SGF29YCL010C QDR1P40475 563 aa5.46□□□□□ -1.54
SGF29YCL010C YJL218WP40892 196 aaKnown RBP5.46□□□□□ -1.54
SGF29YCL010C OST1P41543 476 aaKnown RBP5.46□□□□□ -1.54
SGF29YCL010C CCC1P47818 322 aa5.46□□□□□ -1.54
SGF29YCL010C RBL2P48606 106 aaKnown RBP5.46□□□□□ -1.54
SGF29YCL010C NRK1P53915 240 aa5.46□□□□□ -1.54
SGF29YCL010C BUD25P85052 153 aa5.46□□□□□ -1.54
SGF29YCL010C YLR108CQ12259 485 aa5.46□□□□□ -1.54
SGF29YCL010C GCN4P03069 281 aa5.45□□□□□ -1.54
SGF29YCL010C RPL39P04650 51 aa5.45□□□□□ -1.54
SGF29YCL010C PRE7P23724 241 aaKnown RBP5.45□□□□□ -1.54
SGF29YCL010C DEG1P31115 442 aaKnown RBP5.45□□□□□ -1.54
SGF29YCL010C AFG1P32317 509 aa5.45□□□□□ -1.54
SGF29YCL010C ERG24P32462 438 aaKnown RBP5.45□□□□□ -1.54
SGF29YCL010C PAU2P32612 120 aa5.45□□□□□ -1.54
SGF29YCL010C YBL010CP32788 280 aa5.45□□□□□ -1.54
SGF29YCL010C MTC2P34246 357 aa5.45□□□□□ -1.54
SGF29YCL010C CLG1P35190 452 aa5.45□□□□□ -1.54
SGF29YCL010C GPX2P38143 162 aa5.45□□□□□ -1.54
SGF29YCL010C TCM62P38228 572 aaKnown RBP5.45□□□□□ -1.54
SGF29YCL010C SOH1P38633 127 aa5.45□□□□□ -1.54
SGF29YCL010C YND1P40009 630 aa5.45□□□□□ -1.54
SGF29YCL010C PUG1P40100 303 aa5.45□□□□□ -1.54
SGF29YCL010C RIO2P40160 425 aaKnown RBP5.45□□□□□ -1.54
SGF29YCL010C YAE1P47118 141 aaPredicted RBP5.45□□□□□ -1.54
SGF29YCL010C PMT5P52867 743 aa5.45□□□□□ -1.54
SGF29YCL010C YGL159WP53110 370 aa5.45□□□□□ -1.54
SGF29YCL010C IMO32P53219 342 aa5.45□□□□□ -1.54
SGF29YCL010C YNR048WP53740 393 aa5.45□□□□□ -1.54
SGF29YCL010C CIK1Q01649 594 aa5.45□□□□□ -1.54
SGF29YCL010C GPI17Q04080 534 aa5.45□□□□□ -1.54
SGF29YCL010C TDH3P00359 332 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
SGF29YCL010C PHO4P07270 312 aaKnown RBP5.44□□□□□ -1.54
SGF29YCL010C RPS23AP0CX29 145 aaKnown RBP5.44□□□□□ -1.54
SGF29YCL010C RPS23BP0CX30 145 aa5.44□□□□□ -1.54
SGF29YCL010C NAM2P11325 894 aa5.44□□□□□ -1.54
SGF29YCL010C AHC2P25649 128 aa5.44□□□□□ -1.54
SGF29YCL010C DOA4P32571 926 aa5.44□□□□□ -1.54
SGF29YCL010C SHE2P36068 246 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
SGF29YCL010C YBR096WP38256 230 aa5.44□□□□□ -1.54
SGF29YCL010C ARO9P38840 513 aaPredicted RBP5.44□□□□□ -1.54
SGF29YCL010C DDI1P40087 428 aa5.44□□□□□ -1.54
SGF29YCL010C EGT2P42835 1041 aa5.44□□□□□ -1.54
SGF29YCL010C ATG18P43601 500 aa5.44□□□□□ -1.54
SGF29YCL010C ERJ5P43613 295 aaPredicted RBP5.44□□□□□ -1.54
SGF29YCL010C BNA2P47125 453 aa5.44□□□□□ -1.54
SGF29YCL010C TYW3P53177 273 aa5.44□□□□□ -1.54
SGF29YCL010C CPR8P53728 308 aa5.44□□□□□ -1.54
SGF29YCL010C RNH201P53942 307 aa5.44□□□□□ -1.54
SGF29YCL010C RRS1Q08746 203 aaKnown RBP5.44□□□□□ -1.54
SGF29YCL010C SRL2Q12020 392 aa5.44□□□□□ -1.54
SGF29YCL010C ORT1Q12375 292 aa5.44□□□□□ -1.54
SGF29YCL010C ISA2Q12425 185 aa5.44□□□□□ -1.54
SGF29YCL010C FUR4P05316 633 aaKnown RBP5.43□□□□□ -1.54
SGF29YCL010C CDC31P06704 161 aaKnown RBP5.43□□□□□ -1.54
SGF29YCL010C RPL30P14120 105 aaKnown RBP5.43□□□□□ -1.54
SGF29YCL010C DPB2P24482 689 aaPredicted RBP5.43□□□□□ -1.54
SGF29YCL010C CLB2P24869 491 aa5.43□□□□□ -1.54
SGF29YCL010C CNE1P27825 502 aa5.43□□□□□ -1.54
SGF29YCL010C TMA19P35691 167 aaKnown RBP5.43□□□□□ -1.54
SGF29YCL010C SFK1P35735 353 aa5.43□□□□□ -1.54
SGF29YCL010C SHM2P37291 469 aaKnown RBP5.43□□□□□ -1.54
SGF29YCL010C CTR2P38865 189 aa5.43□□□□□ -1.54
SGF29YCL010C YIL012WP40551 113 aa5.43□□□□□ -1.54
SGF29YCL010C AVT4P50944 713 aa5.43□□□□□ -1.54
SGF29YCL010C YIP5P53108 310 aa5.43□□□□□ -1.54
SGF29YCL010C MTL1P53214 551 aa5.43□□□□□ -1.54
SGF29YCL010C TEX1P53851 422 aaKnown RBP5.43□□□□□ -1.54
SGF29YCL010C ERP4Q12450 207 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms