RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C YLR283WQ05867 314 aa2.05□□□□□ -2.08
CLN3YAL040C GPN3Q06543 272 aa2.05□□□□□ -2.08
CLN3YAL040C YPR174CQ06616 221 aaPredicted RBP2.05□□□□□ -2.08
CLN3YAL040C FDH1Q08911 376 aa2.05□□□□□ -2.08
CLN3YAL040C YOR389WQ08912 624 aa2.05□□□□□ -2.08
CLN3YAL040C TRM10Q12400 293 aa2.05□□□□□ -2.08
CLN3YAL040C YOS9Q99220 542 aa2.05□□□□□ -2.08
CLN3YAL040C GCN1P33892 2672 aaKnown RBP2.05□□□□□ -2.08
CLN3YAL040C KIN28P06242 306 aa2.05□□□□□ -2.08
CLN3YAL040C BAR1P12630 587 aa2.05□□□□□ -2.08
CLN3YAL040C ATP10P18496 279 aa2.05□□□□□ -2.08
CLN3YAL040C HXT2P23585 541 aa2.05□□□□□ -2.08
CLN3YAL040C RPL24BP24000 155 aaKnown RBP2.05□□□□□ -2.08
CLN3YAL040C CLB2P24869 491 aa2.05□□□□□ -2.08
CLN3YAL040C YCR016WP25617 290 aaKnown RBP2.05□□□□□ -2.08
CLN3YAL040C OAC1P32332 324 aa2.05□□□□□ -2.08
CLN3YAL040C RPC34P32910 317 aa2.05□□□□□ -2.08
CLN3YAL040C ECT1P33412 323 aa2.05□□□□□ -2.08
CLN3YAL040C MSN2P33748 704 aa2.05□□□□□ -2.08
CLN3YAL040C PAD1P33751 242 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
CLN3YAL040C MTR2P34232 184 aaKnown RBP2.05□□□□□ -2.08
CLN3YAL040C MIA40P36046 403 aa2.05□□□□□ -2.08
CLN3YAL040C GPX2P38143 162 aa2.05□□□□□ -2.08
CLN3YAL040C ALP1P38971 573 aa2.05□□□□□ -2.08
CLN3YAL040C ISC1P40015 477 aaKnown RBP2.05□□□□□ -2.08
CLN3YAL040C SNO3P43544 222 aa2.05□□□□□ -2.08
CLN3YAL040C YFR054CP43622 192 aa2.05□□□□□ -2.08
CLN3YAL040C YAR1P46683 200 aa2.05□□□□□ -2.08
CLN3YAL040C YJR011CP47086 261 aaPredicted RBP2.05□□□□□ -2.08
CLN3YAL040C MPC1P53157 130 aaKnown RBP2.05□□□□□ -2.08
CLN3YAL040C YGR168CP53293 376 aa2.05□□□□□ -2.08
CLN3YAL040C NRM1P53718 249 aa2.05□□□□□ -2.08
CLN3YAL040C ERG13P54839 491 aaKnown RBP2.05□□□□□ -2.08
CLN3YAL040C GPI17Q04080 534 aa2.05□□□□□ -2.08
CLN3YAL040C ARP10Q04549 284 aa2.05□□□□□ -2.08
CLN3YAL040C BNA5Q05979 453 aa2.05□□□□□ -2.08
CLN3YAL040C YOR365CQ08844 703 aa2.05□□□□□ -2.08
CLN3YAL040C YDL211CQ12121 372 aa2.05□□□□□ -2.08
CLN3YAL040C TPO4Q12256 659 aa2.05□□□□□ -2.08
CLN3YAL040C SFM1Q12314 213 aa2.05□□□□□ -2.08
CLN3YAL040C YIL046W-AQ3E7Z4 54 aa2.05□□□□□ -2.08
CLN3YAL040C SEC16P48415 2195 aaKnown RBP2.04□□□□□ -2.08
CLN3YAL040C YSF3P0C074 85 aaPredicted RBP2.04□□□□□ -2.08
CLN3YAL040C YOL162WP0CF19 215 aa2.04□□□□□ -2.08
CLN3YAL040C YOL163WP0CF20 169 aa2.04□□□□□ -2.08
CLN3YAL040C RPL20AP0CX23 172 aaKnown RBP2.04□□□□□ -2.08
CLN3YAL040C RPL20BP0CX24 172 aaPredicted RBP2.04□□□□□ -2.08
CLN3YAL040C FUS3P16892 353 aaKnown RBP2.04□□□□□ -2.08
CLN3YAL040C ERD2P18414 219 aa2.04□□□□□ -2.08
CLN3YAL040C IDP1P21954 428 aaKnown RBP2.04□□□□□ -2.08
CLN3YAL040C PTC6P25646 442 aa2.04□□□□□ -2.08
CLN3YAL040C YPS1P32329 569 aa2.04□□□□□ -2.08
CLN3YAL040C REC114P32841 428 aa2.04□□□□□ -2.08
CLN3YAL040C SOR1P35497 357 aaKnown RBP2.04□□□□□ -2.08
CLN3YAL040C TCM62P38228 572 aaKnown RBP2.04□□□□□ -2.08
CLN3YAL040C PRP39P39682 629 aaKnown RBP2.04□□□□□ -2.08
CLN3YAL040C VPS52P39904 641 aa2.04□□□□□ -2.08
CLN3YAL040C PCL6P40038 420 aa2.04□□□□□ -2.08
CLN3YAL040C IRC7P43623 340 aa2.04□□□□□ -2.08
CLN3YAL040C BAT2P47176 376 aaKnown RBP2.04□□□□□ -2.08
CLN3YAL040C RPS12P48589 143 aaKnown RBP2.04□□□□□ -2.08
CLN3YAL040C CWC23P52868 283 aaPredicted RBP2.04□□□□□ -2.08
CLN3YAL040C NQM1P53228 333 aaPredicted RBP2.04□□□□□ -2.08
CLN3YAL040C YGR067CP53243 804 aa2.04□□□□□ -2.08
CLN3YAL040C CPR8P53728 308 aa2.04□□□□□ -2.08
CLN3YAL040C RSM23Q01163 450 aa2.04□□□□□ -2.08
CLN3YAL040C OST6Q03723 332 aa2.04□□□□□ -2.08
CLN3YAL040C YMR087WQ04299 284 aa2.04□□□□□ -2.08
CLN3YAL040C SEI1Q06058 285 aa2.04□□□□□ -2.08
CLN3YAL040C YPR091CQ06833 770 aa2.04□□□□□ -2.08
CLN3YAL040C SYO1Q07395 620 aa2.04□□□□□ -2.08
CLN3YAL040C SOR2Q07786 357 aa2.04□□□□□ -2.08
CLN3YAL040C BSC6Q08280 497 aa2.04□□□□□ -2.08
CLN3YAL040C PEX27Q08580 376 aa2.04□□□□□ -2.08
CLN3YAL040C GEP3Q08622 556 aa2.04□□□□□ -2.08
CLN3YAL040C PAA1Q12447 191 aaKnown RBP2.04□□□□□ -2.08
CLN3YAL040C AIM45Q12480 344 aaKnown RBP2.04□□□□□ -2.08
CLN3YAL040C PSF1Q12488 208 aa2.04□□□□□ -2.08
CLN3YAL040C SPO24Q3E752 67 aa2.04□□□□□ -2.08
CLN3YAL040C COX2P00410 251 aa2.03□□□□□ -2.08
CLN3YAL040C REP1P03871 373 aa2.03□□□□□ -2.08
CLN3YAL040C CHO1P08456 276 aa2.03□□□□□ -2.08
CLN3YAL040C MRP2P10663 115 aaPredicted RBP2.03□□□□□ -2.08
CLN3YAL040C TFS1P14306 219 aa2.03□□□□□ -2.08
CLN3YAL040C SNF6P18888 332 aa2.03□□□□□ -2.08
CLN3YAL040C YPK2P18961 677 aa2.03□□□□□ -2.08
CLN3YAL040C ZUO1P32527 433 aaKnown RBP2.03□□□□□ -2.08
CLN3YAL040C YEF1P32622 495 aa2.03□□□□□ -2.08
CLN3YAL040C ZRT3P34240 503 aa2.03□□□□□ -2.08
CLN3YAL040C VPS51P36116 164 aa2.03□□□□□ -2.08
CLN3YAL040C SHE1P38200 338 aa2.03□□□□□ -2.08
CLN3YAL040C YHR035WP38769 630 aa2.03□□□□□ -2.08
CLN3YAL040C YHK8P38776 514 aa2.03□□□□□ -2.08
CLN3YAL040C JLP2P40206 208 aa2.03□□□□□ -2.08
CLN3YAL040C ICE2P40499 491 aa2.03□□□□□ -2.08
CLN3YAL040C STB1P42845 420 aa2.03□□□□□ -2.08
CLN3YAL040C BNA6P43619 295 aa2.03□□□□□ -2.08
CLN3YAL040C ALB1P47019 175 aaPredicted RBP2.03□□□□□ -2.08
CLN3YAL040C HAM1P47119 197 aaKnown RBP2.03□□□□□ -2.08
CLN3YAL040C YJR141WP47172 347 aaPredicted RBP2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 117.8 ms