RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C ASR1Q06834 288 aa11.75□□□□□ -0.53
SSA1YAL005C NGL1Q08213 363 aaKnown RBP11.75□□□□□ -0.53
SSA1YAL005C SOG2Q08817 791 aa11.75□□□□□ -0.53
SSA1YAL005C SCEIP03882 235 aa11.74□□□□□ -0.53
SSA1YAL005C PRB1P09232 635 aa11.74□□□□□ -0.53
SSA1YAL005C RPI1P23250 407 aaKnown RBP11.74□□□□□ -0.53
SSA1YAL005C ATG15P25641 520 aa11.74□□□□□ -0.53
SSA1YAL005C PAU2P32612 120 aa11.74□□□□□ -0.53
SSA1YAL005C YBR137WP38276 179 aa11.74□□□□□ -0.53
SSA1YAL005C SDS24P38314 527 aa11.74□□□□□ -0.53
SSA1YAL005C YGL204CP53089 101 aa11.74□□□□□ -0.53
SSA1YAL005C GPI17Q04080 534 aa11.74□□□□□ -0.53
SSA1YAL005C NIT3P49954 291 aa11.74□□□□□ -0.53
SSA1YAL005C RAI1P53063 387 aaKnown RBP11.74□□□□□ -0.53
SSA1YAL005C MCT1Q12283 360 aa11.74□□□□□ -0.53
SSA1YAL005C RTN2Q12443 393 aa11.74□□□□□ -0.53
SSA1YAL005C RPS18AP0CX55 146 aaKnown RBP11.73□□□□□ -0.53
SSA1YAL005C RPS18BP0CX56 146 aaPredicted RBP11.73□□□□□ -0.53
SSA1YAL005C MAK32P23060 363 aa11.73□□□□□ -0.53
SSA1YAL005C DOC1P53068 250 aa11.73□□□□□ -0.53
SSA1YAL005C MRPL35Q06678 367 aa11.73□□□□□ -0.53
SSA1YAL005C COX17Q12287 69 aa11.73□□□□□ -0.53
SSA1YAL005C HEM4P06174 275 aa11.72□□□□□ -0.53
SSA1YAL005C FUS3P16892 353 aaKnown RBP11.72□□□□□ -0.53
SSA1YAL005C SHE2P36068 246 aaKnown RBP RIP-Chip data11.72□□□□□ -0.53not detected
SSA1YAL005C TAF4P50105 388 aa11.72□□□□□ -0.53
SSA1YAL005C CWC23P52868 283 aaPredicted RBP11.72□□□□□ -0.53
SSA1YAL005C TYW3P53177 273 aa11.72□□□□□ -0.53
SSA1YAL005C MRPS17Q03246 237 aaPredicted RBP11.72□□□□□ -0.53
SSA1YAL005C MSH5Q12175 901 aa11.72□□□□□ -0.53
SSA1YAL005C RRI1Q12468 440 aa11.72□□□□□ -0.53
SSA1YAL005C COX5BP00425 151 aa11.72□□□□□ -0.53
SSA1YAL005C GCN4P03069 281 aa11.72□□□□□ -0.53
SSA1YAL005C SFK1P35735 353 aa11.72□□□□□ -0.53
SSA1YAL005C FRM2P37261 193 aa11.72□□□□□ -0.53
SSA1YAL005C YHK8P38776 514 aa11.72□□□□□ -0.53
SSA1YAL005C YER137CP40083 148 aaKnown RBP11.72□□□□□ -0.53
SSA1YAL005C ATG18P43601 500 aa11.72□□□□□ -0.53
SSA1YAL005C LOH1P47055 219 aa11.72□□□□□ -0.53
SSA1YAL005C YIP4P53093 235 aa11.72□□□□□ -0.53
SSA1YAL005C ORM1P53224 222 aa11.72□□□□□ -0.53
SSA1YAL005C FYV6P53913 173 aa11.72□□□□□ -0.53
SSA1YAL005C SAM50P53969 484 aa11.72□□□□□ -0.53
SSA1YAL005C SUS1Q6WNK7 96 aa11.72□□□□□ -0.53
SSA1YAL005C QCR7P00128 127 aa11.71□□□□□ -0.53
SSA1YAL005C PHO4P07270 312 aaKnown RBP11.71□□□□□ -0.53
SSA1YAL005C ERG24P32462 438 aaKnown RBP11.71□□□□□ -0.53
SSA1YAL005C MRPS5P33759 307 aa11.71□□□□□ -0.53
SSA1YAL005C TMA19P35691 167 aaKnown RBP11.71□□□□□ -0.53
SSA1YAL005C BOL3P39724 118 aa11.71□□□□□ -0.53
SSA1YAL005C IDP2P41939 412 aa11.71□□□□□ -0.53
SSA1YAL005C AAD14P42884 376 aa11.71□□□□□ -0.53
SSA1YAL005C YLR152CP54072 576 aa11.71□□□□□ -0.53
SSA1YAL005C YDR387CQ04162 555 aa11.71□□□□□ -0.53
SSA1YAL005C LUC7Q07508 261 aaPredicted RBP11.71□□□□□ -0.53
SSA1YAL005C MKS1P34072 584 aa11.7□□□□□ -0.54
SSA1YAL005C YKL069WP36088 180 aa11.7□□□□□ -0.54
SSA1YAL005C PUG1P40100 303 aa11.7□□□□□ -0.54
SSA1YAL005C MRH4P53166 561 aa11.7□□□□□ -0.54
SSA1YAL005C TNA1P53322 534 aa11.7□□□□□ -0.54
SSA1YAL005C ATG41Q12048 136 aa11.7□□□□□ -0.54
SSA1YAL005C ARG80P07249 177 aa11.7□□□□□ -0.54
SSA1YAL005C ACS2P52910 683 aaKnown RBP11.7□□□□□ -0.54
SSA1YAL005C SCY1P53009 804 aa11.7□□□□□ -0.54
SSA1YAL005C CIK1Q01649 594 aa11.7□□□□□ -0.54
SSA1YAL005C RCE1Q03530 315 aa11.7□□□□□ -0.54
SSA1YAL005C TDA1Q03533 586 aa11.7□□□□□ -0.54
SSA1YAL005C CRR1Q05790 422 aa11.7□□□□□ -0.54
SSA1YAL005C YDL183CP48569 320 aa11.69□□□□□ -0.54
SSA1YAL005C THI72Q08579 599 aa11.69□□□□□ -0.54
SSA1YAL005C SEN34P39707 275 aa11.68□□□□□ -0.54
SSA1YAL005C MIT1P40002 666 aa11.68□□□□□ -0.54
SSA1YAL005C YER084WP40057 128 aa11.68□□□□□ -0.54
SSA1YAL005C SER2P42941 309 aa11.68□□□□□ -0.54
SSA1YAL005C TIM10P87108 93 aa11.68□□□□□ -0.54
SSA1YAL005C DCS1Q06151 350 aa11.68□□□□□ -0.54
SSA1YAL005C HEM25Q07534 307 aa11.68□□□□□ -0.54
SSA1YAL005C IZH2Q12442 317 aa11.68□□□□□ -0.54
SSA1YAL005C CPR5P35176 225 aa11.68□□□□□ -0.54
SSA1YAL005C TAT1P38085 619 aa11.68□□□□□ -0.54
SSA1YAL005C FCY21P40039 528 aa11.68□□□□□ -0.54
SSA1YAL005C DLS1P40366 167 aa11.68□□□□□ -0.54
SSA1YAL005C MTM1P53320 366 aa11.68□□□□□ -0.54
SSA1YAL005C AAH1P53909 347 aa11.68□□□□□ -0.54
SSA1YAL005C API2Q04413 109 aa11.68□□□□□ -0.54
SSA1YAL005C SGA1P08019 549 aa11.67□□□□□ -0.54
SSA1YAL005C HOM6P31116 359 aaKnown RBP11.67□□□□□ -0.54
SSA1YAL005C CIN2P46670 268 aa11.67□□□□□ -0.54
SSA1YAL005C MES1P00958 751 aaKnown RBP11.66□□□□□ -0.54
SSA1YAL005C MBA1P38300 278 aa11.66□□□□□ -0.54
SSA1YAL005C SSH1P38353 490 aaKnown RBP11.66□□□□□ -0.54
SSA1YAL005C CTK2P46962 323 aa11.66□□□□□ -0.54
SSA1YAL005C ORT1Q12375 292 aa11.66□□□□□ -0.54
SSA1YAL005C CDC36P06100 191 aaPredicted RBP11.66□□□□□ -0.54
SSA1YAL005C MET3P08536 511 aa11.66□□□□□ -0.54
SSA1YAL005C ATF1P40353 525 aa11.66□□□□□ -0.54
SSA1YAL005C MOB2P43563 287 aa11.66□□□□□ -0.54
SSA1YAL005C ERV29P53337 310 aa11.66□□□□□ -0.54
SSA1YAL005C RPL6AQ02326 176 aaKnown RBP11.66□□□□□ -0.54
SSA1YAL005C MATALPHA1P0CY06 175 aa11.65□□□□□ -0.54
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms