RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 ZNF263O14978 683 aa19.07■□□□□ 0.64
PHGDH-232ENST00000641947 OFD1O75665 1012 aa19.07■□□□□ 0.64
PHGDH-232ENST00000641947 FGFR4P22455 802 aa19.07■□□□□ 0.64
PHGDH-232ENST00000641947 ENPEPQ07075 957 aa19.07■□□□□ 0.64
PHGDH-232ENST00000641947 SFMBT2Q5VUG0 894 aa19.07■□□□□ 0.64
PHGDH-232ENST00000641947 C15orf39Q6ZRI6 1047 aa19.07■□□□□ 0.64
PHGDH-232ENST00000641947 SV2AQ7L0J3 742 aa19.07■□□□□ 0.64
PHGDH-232ENST00000641947 TAS1R2Q8TE23 839 aa19.07■□□□□ 0.64
PHGDH-232ENST00000641947 SYN2Q92777 582 aaPredicted RBP19.07■□□□□ 0.64
PHGDH-232ENST00000641947 ELMO3Q96BJ8 720 aa19.07■□□□□ 0.64
PHGDH-232ENST00000641947 CPB2Q96IY4 423 aa19.07■□□□□ 0.64
PHGDH-232ENST00000641947 KATNAL1Q9BW62 490 aa19.07■□□□□ 0.64
PHGDH-232ENST00000641947 CDT1Q9H211 546 aa19.07■□□□□ 0.64
PHGDH-232ENST00000641947 XPNPEP3Q9NQH7 507 aa19.07■□□□□ 0.64
PHGDH-232ENST00000641947 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.07■□□□□ 0.641e-6■■■■■ 90
PHGDH-232ENST00000641947 APEX2Q9UBZ4 518 aa19.07■□□□□ 0.64
PHGDH-232ENST00000641947 LDHAP00338 332 aaKnown RBP19.06■□□□□ 0.64
PHGDH-232ENST00000641947 ABL1P00519 1130 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 HMGCRP04035 888 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 CCDC175P0C221 793 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 EIF4A3P38919 411 aaKnown RBP19.06■□□□□ 0.64
PHGDH-232ENST00000641947 KRT39Q6A163 491 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 ZNF410Q86VK4 478 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 BRSK2Q8IWQ3 736 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 DNAJB3Q8WWF6 145 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 MTG1Q9BT17 334 aaPredicted RBP19.06■□□□□ 0.64
PHGDH-232ENST00000641947 TCHPQ9BT92 498 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 PDZD7Q9H5P4 517 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 AIPL1Q9NZN9 384 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 TNFSF13BQ9Y275 285 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 COQ4Q9Y3A0 265 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 C17orf102A2RUQ5 167 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 OGTO15294 1046 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 ZSCAN12O43309 604 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 ZEB2O60315 1214 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 TSPAN1O60635 241 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 ARF4P18085 180 aaPredicted RBP19.06■□□□□ 0.64
PHGDH-232ENST00000641947 ASTE1Q2TB18 679 aaPredicted RBP19.06■□□□□ 0.64
PHGDH-232ENST00000641947 ZNF568Q3ZCX4 644 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 SCARA3Q6AZY7 606 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 CCSAPQ6IQ19 270 aaPredicted RBP19.06■□□□□ 0.64
PHGDH-232ENST00000641947 IRF2BP2Q7Z5L9 587 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 TMEM192Q8IY95 271 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 KLHDC9Q8NEP7 349 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 DNAJC12Q9UKB3 198 aa19.06■□□□□ 0.64
PHGDH-232ENST00000641947 CPSF3Q9UKF6 684 aaKnown RBP19.06■□□□□ 0.64
PHGDH-232ENST00000641947 RALGAPA2Q2PPJ7 1873 aa19.05■□□□□ 0.64
PHGDH-232ENST00000641947 MEFVO15553 781 aaPredicted RBP19.05■□□□□ 0.64
PHGDH-232ENST00000641947 HOXD10P28358 340 aa19.05■□□□□ 0.64
PHGDH-232ENST00000641947 GTF2H1P32780 548 aa19.05■□□□□ 0.64
PHGDH-232ENST00000641947 ARID5AQ03989 594 aa19.05■□□□□ 0.64
PHGDH-232ENST00000641947 NBPF20Q3BBV1 942 aa19.05■□□□□ 0.64
PHGDH-232ENST00000641947 RAET1EQ8TD07 263 aa19.05■□□□□ 0.64
PHGDH-232ENST00000641947 KAT5Q92993 513 aa19.05■□□□□ 0.64
PHGDH-232ENST00000641947 PRIMPOLQ96LW4 560 aa19.05■□□□□ 0.64
PHGDH-232ENST00000641947 SCLT1Q96NL6 688 aa19.05■□□□□ 0.64
PHGDH-232ENST00000641947 SPAG5Q96R06 1193 aa19.05■□□□□ 0.64
PHGDH-232ENST00000641947 OSMRQ99650 979 aa19.05■□□□□ 0.64
PHGDH-232ENST00000641947 NUCKS1Q9H1E3 243 aaKnown RBP19.05■□□□□ 0.64
PHGDH-232ENST00000641947 TSKSQ9UJT2 592 aa19.05■□□□□ 0.64
PHGDH-232ENST00000641947 TFR2Q9UP52 801 aa19.05■□□□□ 0.64
PHGDH-232ENST00000641947 F8VZ95 297 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 FANCGO15287 622 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 KPNA6O60684 536 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 FKTNO75072 461 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 TNNT1P13805 278 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 MAPK8IP2Q13387 824 aaPredicted RBP19.04■□□□□ 0.64
PHGDH-232ENST00000641947 TDRD10Q5VZ19 366 aaKnown RBP19.04■□□□□ 0.64
PHGDH-232ENST00000641947 THNSL1Q8IYQ7 743 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 CCDC170Q8IYT3 715 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 C7orf31Q8N865 590 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 OR5B17Q8NGF7 314 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 MYO6Q9UM54 1294 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 GINS2Q9Y248 185 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 PDCD11Q14690 1871 aaKnown RBP19.04■□□□□ 0.64
PHGDH-232ENST00000641947 EIF3CLB5ME19 914 aaKnown RBP19.04■□□□□ 0.64
PHGDH-232ENST00000641947 CCP110O43303 1012 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 VNN1O95497 513 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 C4BPAP04003 597 aaKnown RBP19.04■□□□□ 0.64
PHGDH-232ENST00000641947 ASGR1P07306 291 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 ARHGAP25P42331 645 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 KIF11P52732 1056 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 OSTNP61366 133 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 CYP27A1Q02318 531 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 DRAP1Q14919 205 aaPredicted RBP19.04■□□□□ 0.64
PHGDH-232ENST00000641947 PTPN14Q15678 1187 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 ENOX2Q16206 610 aaKnown RBP19.04■□□□□ 0.64
PHGDH-232ENST00000641947 KCNA10Q16322 511 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 ASIC2Q16515 512 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 TMEM132AQ24JP5 1023 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 ZACNQ401N2 412 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 SRGAP1Q7Z6B7 1085 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 PXYLP1Q8TE99 480 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 TMEM40Q8WWA1 233 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 ERO1AQ96HE7 468 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 EIF3CQ99613 913 aaKnown RBP19.04■□□□□ 0.64
PHGDH-232ENST00000641947 CGRRF1Q99675 332 aa19.04■□□□□ 0.64
PHGDH-232ENST00000641947 GRIN2DO15399 1336 aa19.03■□□□□ 0.64
PHGDH-232ENST00000641947 RCCD1A6NED2 376 aa19.03■□□□□ 0.64
PHGDH-232ENST00000641947 SERPING1P05155 500 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms