RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 HOXD8P13378 290 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-208ENST00000641023 TNFAIP3P21580 790 aa18.66■□□□□ 0.58
PHGDH-208ENST00000641023 PTENP60484 403 aa18.66■□□□□ 0.58
PHGDH-208ENST00000641023 POU5F1BQ06416 359 aa18.66■□□□□ 0.58
PHGDH-208ENST00000641023 PRPF4BQ13523 1007 aaKnown RBP18.66■□□□□ 0.58
PHGDH-208ENST00000641023 IFI16Q16666 785 aaKnown RBP18.66■□□□□ 0.58
PHGDH-208ENST00000641023 C17orf99Q6UX52 265 aa18.66■□□□□ 0.58
PHGDH-208ENST00000641023 H2AFVQ71UI9 128 aa18.66■□□□□ 0.58
PHGDH-208ENST00000641023 U2AF1L4Q8WU68 220 aaKnown RBP18.66■□□□□ 0.58
PHGDH-208ENST00000641023 INO80BQ9C086 356 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-208ENST00000641023 FZD8Q9H461 694 aa18.66■□□□□ 0.58
PHGDH-208ENST00000641023 PUF60Q9UHX1 559 aaKnown RBP18.66■□□□□ 0.58
PHGDH-208ENST00000641023 NENFQ9UMX5 172 aa18.66■□□□□ 0.58
PHGDH-208ENST00000641023 ZNF236Q9UL36 1845 aa18.66■□□□□ 0.58
PHGDH-208ENST00000641023 ECM2O94769 699 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-208ENST00000641023 HOXC6P09630 235 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 HARSP12081 509 aaKnown RBP18.65■□□□□ 0.58
PHGDH-208ENST00000641023 ZACNQ401N2 412 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 WDR44Q5JSH3 913 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 ENOSF1Q7L5Y1 443 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 HELQQ8TDG4 1101 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 ZNF516Q92618 1163 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 SYT11Q9BT88 431 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 ZFYVE28Q9HCC9 887 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 CTAGE15A4D2H0 777 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 TTLL13PA6NNM8 815 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 C4BPAP04003 597 aaKnown RBP18.65■□□□□ 0.58
PHGDH-208ENST00000641023 GJB1P08034 283 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 CTAGE8P0CG41 777 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 PRLRP16471 622 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 USP8P40818 1118 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 GCNT1Q02742 428 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 MCL1Q07820 350 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 CTAGE6Q86UF2 777 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 CTAGE4Q8IX94 777 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 FAM71AQ8IYT1 594 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 LNX1Q8TBB1 728 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-208ENST00000641023 SHC3Q92529 594 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 KREMEN1Q96MU8 473 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 AGPAT1Q99943 283 aa18.65■□□□□ 0.58
PHGDH-208ENST00000641023 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.65■□□□□ 0.581e-6■■■■■ 90
PHGDH-208ENST00000641023 PHKA2P46019 1235 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 AP3M2P53677 418 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 SREBF2Q12772 1141 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 BIRC3Q13489 604 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 ZBTB41Q5SVQ8 909 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 TSHZ1Q6ZSZ6 1077 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 RSRC2Q7L4I2 434 aaKnown RBP18.64■□□□□ 0.57
PHGDH-208ENST00000641023 ZBTB33Q86T24 672 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 KAT5Q92993 513 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 CCDC102AQ96A19 550 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 CGRRF1Q99675 332 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 C1orf112Q9NSG2 853 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 TSKSQ9UJT2 592 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 AKT3Q9Y243 479 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 PASKQ96RG2 1323 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 OGTO15294 1046 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 TMEM132AQ24JP5 1023 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 ATF7IP2Q5U623 682 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 LMBRD2Q68DH5 695 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-208ENST00000641023 MTHFD1LQ6UB35 978 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 MPZL3Q6UWV2 235 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 BRSK2Q8IWQ3 736 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 ZBTB10Q96DT7 871 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 SEPT11Q9NVA2 429 aaKnown RBP18.64■□□□□ 0.57
PHGDH-208ENST00000641023 PRMT7Q9NVM4 692 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-208ENST00000641023 SNX12Q9UMY4 172 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 PCDHGC5Q9Y5F6 944 aa18.64■□□□□ 0.57
PHGDH-208ENST00000641023 CNTNAP2Q9UHC6 1331 aa18.63■□□□□ 0.57
PHGDH-208ENST00000641023 WNT7BP56706 349 aa18.63■□□□□ 0.57
PHGDH-208ENST00000641023 MBTD1Q05BQ5 628 aa18.63■□□□□ 0.57
PHGDH-208ENST00000641023 CKAP4Q07065 602 aaKnown RBP18.63■□□□□ 0.57
PHGDH-208ENST00000641023 PPFIA1Q13136 1202 aa18.63■□□□□ 0.57
PHGDH-208ENST00000641023 GRM1Q13255 1194 aa18.63■□□□□ 0.57
PHGDH-208ENST00000641023 SURF1Q15526 300 aa18.63■□□□□ 0.57
PHGDH-208ENST00000641023 TEX35Q5T0J7 233 aa18.63■□□□□ 0.57
PHGDH-208ENST00000641023 TDRD10Q5VZ19 366 aaKnown RBP18.63■□□□□ 0.57
PHGDH-208ENST00000641023 PDCL2Q8N4E4 241 aa18.63■□□□□ 0.57
PHGDH-208ENST00000641023 GPR161Q8N6U8 529 aaKnown RBP18.63■□□□□ 0.57
PHGDH-208ENST00000641023 LINC01465Q8N7H1 131 aa18.63■□□□□ 0.57
PHGDH-208ENST00000641023 RABGGTAQ92696 567 aa18.63■□□□□ 0.57
PHGDH-208ENST00000641023 ZNF668Q96K58 619 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-208ENST00000641023 TLL2Q9Y6L7 1015 aa18.63■□□□□ 0.57
PHGDH-208ENST00000641023 A0A0A6YYK5 440 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-208ENST00000641023 DYNC1LI2O43237 492 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-208ENST00000641023 SRGAP2O75044 1071 aa18.62■□□□□ 0.57
PHGDH-208ENST00000641023 PALMO75781 387 aa18.62■□□□□ 0.57
PHGDH-208ENST00000641023 TCP1P17987 556 aaKnown RBP18.62■□□□□ 0.57
PHGDH-208ENST00000641023 PROZP22891 400 aa18.62■□□□□ 0.57
PHGDH-208ENST00000641023 RGS2P41220 211 aa18.62■□□□□ 0.57
PHGDH-208ENST00000641023 PIK3CAP42336 1068 aa18.62■□□□□ 0.57
PHGDH-208ENST00000641023 NOP2P46087 812 aaKnown RBP18.62■□□□□ 0.57
PHGDH-208ENST00000641023 SEZ6Q53EL9 994 aa18.62■□□□□ 0.57
PHGDH-208ENST00000641023 PRAMEF19Q5SWL8 479 aa18.62■□□□□ 0.57
PHGDH-208ENST00000641023 SOCS4Q8WXH5 440 aa18.62■□□□□ 0.57
PHGDH-208ENST00000641023 TATDN2Q93075 761 aa18.62■□□□□ 0.57
PHGDH-208ENST00000641023 MAP7D2Q96T17 732 aa18.62■□□□□ 0.57
PHGDH-208ENST00000641023 IFT122Q9HBG6 1241 aa18.62■□□□□ 0.57
PHGDH-208ENST00000641023 A6NJR5 290 aa18.62■□□□□ 0.57
PHGDH-208ENST00000641023 FAM189A1O60320 539 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms