RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 RARS2Q5T160 578 aaKnown RBP27.72■■■□□ 2.03
VEGFA-232ENST00000640653 FUT10Q6P4F1 479 aa27.72■■■□□ 2.03
VEGFA-232ENST00000640653 TAS1R1Q7RTX1 841 aa27.72■■■□□ 2.03
VEGFA-232ENST00000640653 CALML4Q96GE6 196 aa27.72■■■□□ 2.03
VEGFA-232ENST00000640653 MRPL4Q9BYD3 311 aaKnown RBP27.72■■■□□ 2.03
VEGFA-232ENST00000640653 ADAM28Q9UKQ2 775 aa27.72■■■□□ 2.03
VEGFA-232ENST00000640653 GDAQ9Y2T3 454 aa27.72■■■□□ 2.03
VEGFA-232ENST00000640653 SPDYE4A6NLX3 237 aa27.71■■■□□ 2.03
VEGFA-232ENST00000640653 PRR33A8MZF0 331 aa27.71■■■□□ 2.03
VEGFA-232ENST00000640653 F8W810 466 aa27.71■■■□□ 2.03
VEGFA-232ENST00000640653 PLA2G4BP0C869 781 aa27.71■■■□□ 2.03
VEGFA-232ENST00000640653 CLCN4P51793 760 aa27.71■■■□□ 2.03
VEGFA-232ENST00000640653 SLC12A3P55017 1021 aa27.71■■■□□ 2.03
VEGFA-232ENST00000640653 DSG1Q02413 1049 aa27.71■■■□□ 2.03
VEGFA-232ENST00000640653 HSP90AA2PQ14568 343 aaPredicted RBP27.71■■■□□ 2.03
VEGFA-232ENST00000640653 FBXL18Q96ME1 805 aa27.71■■■□□ 2.03
VEGFA-232ENST00000640653 NR2E1Q9Y466 385 aa27.71■■■□□ 2.03
VEGFA-232ENST00000640653 PTGESO14684 152 aa27.7■■■□□ 2.02
VEGFA-232ENST00000640653 TADA2AO75478 443 aa27.7■■■□□ 2.02
VEGFA-232ENST00000640653 ADH1AP07327 375 aa27.7■■■□□ 2.02
VEGFA-232ENST00000640653 LONP1P36776 959 aaKnown RBP27.7■■■□□ 2.02
VEGFA-232ENST00000640653 SMTNP53814 917 aa27.7■■■□□ 2.02
VEGFA-232ENST00000640653 RAD51AP2Q09MP3 1159 aa27.7■■■□□ 2.02
VEGFA-232ENST00000640653 SF3A1Q15459 793 aaKnown RBP27.7■■■□□ 2.02
VEGFA-232ENST00000640653 KIAA0319Q5VV43 1072 aa27.7■■■□□ 2.02
VEGFA-232ENST00000640653 C12orf76Q8N812 135 aaPredicted RBP27.7■■■□□ 2.02
VEGFA-232ENST00000640653 ACO2Q99798 780 aaKnown RBP27.7■■■□□ 2.02
VEGFA-232ENST00000640653 SFXN1Q9H9B4 322 aa27.7■■■□□ 2.02
VEGFA-232ENST00000640653 CHST7Q9NS84 486 aa27.7■■■□□ 2.02
VEGFA-232ENST00000640653 PLS3P13797 630 aa27.69■■■□□ 2.02
VEGFA-232ENST00000640653 USP41Q3LFD5 358 aa27.69■■■□□ 2.02
VEGFA-232ENST00000640653 ZNF568Q3ZCX4 644 aa27.69■■■□□ 2.02
VEGFA-232ENST00000640653 ATAT1Q5SQI0 421 aa27.69■■■□□ 2.02
VEGFA-232ENST00000640653 SPIRE2Q8WWL2 714 aa27.69■■■□□ 2.02
VEGFA-232ENST00000640653 INTS4Q96HW7 963 aaKnown RBP27.69■■■□□ 2.02
VEGFA-232ENST00000640653 NTPCRQ9BSD7 190 aaKnown RBP27.69■■■□□ 2.02
VEGFA-232ENST00000640653 RXFP1Q9HBX9 757 aa27.69■■■□□ 2.02
VEGFA-232ENST00000640653 DPP7Q9UHL4 492 aa27.69■■■□□ 2.02
VEGFA-232ENST00000640653 SF3B1O75533 1304 aaKnown RBP eCLIP27.68■■■□□ 2.026e-7■■■■■ 31.1
VEGFA-232ENST00000640653 CASTOR2A6NHX0 329 aa27.68■■■□□ 2.02
VEGFA-232ENST00000640653 SFI1A8K8P3 1242 aa27.68■■■□□ 2.02
VEGFA-232ENST00000640653 SLC16A4O15374 487 aa27.68■■■□□ 2.02
VEGFA-232ENST00000640653 ELMSAN1Q6PJG2 1045 aa27.68■■■□□ 2.02
VEGFA-232ENST00000640653 TAS1R3Q7RTX0 852 aa27.68■■■□□ 2.02
VEGFA-232ENST00000640653 GPR65Q8IYL9 337 aa27.68■■■□□ 2.02
VEGFA-232ENST00000640653 RABGGTAQ92696 567 aa27.68■■■□□ 2.02
VEGFA-232ENST00000640653 GPR62Q9BZJ7 368 aa27.68■■■□□ 2.02
VEGFA-232ENST00000640653 POMKQ9H5K3 350 aa27.68■■■□□ 2.02
VEGFA-232ENST00000640653 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.68■■■□□ 2.02
VEGFA-232ENST00000640653 CDH22Q9UJ99 828 aa27.68■■■□□ 2.02
VEGFA-232ENST00000640653 TEX28O15482 410 aa27.67■■■□□ 2.02
VEGFA-232ENST00000640653 YARSP54577 528 aaKnown RBP27.67■■■□□ 2.02
VEGFA-232ENST00000640653 CREMQ03060 361 aa27.67■■■□□ 2.02
VEGFA-232ENST00000640653 STRN3Q13033 797 aa27.67■■■□□ 2.02
VEGFA-232ENST00000640653 RASSF8Q8NHQ8 419 aa27.67■■■□□ 2.02
VEGFA-232ENST00000640653 PAAF1Q9BRP4 392 aa27.67■■■□□ 2.02
VEGFA-232ENST00000640653 CCDC94Q9BW85 323 aaPredicted RBP27.67■■■□□ 2.02
VEGFA-232ENST00000640653 TARS2Q9BW92 718 aaKnown RBP27.67■■■□□ 2.02
VEGFA-232ENST00000640653 CDT1Q9H211 546 aa27.67■■■□□ 2.02
VEGFA-232ENST00000640653 TSHZ2Q9NRE2 1034 aa27.67■■■□□ 2.02
VEGFA-232ENST00000640653 TOPORSQ9NS56 1045 aaPredicted RBP27.67■■■□□ 2.02
VEGFA-232ENST00000640653 CACNG4Q9UBN1 327 aa27.67■■■□□ 2.02
VEGFA-232ENST00000640653 RAPGEFL1Q9UHV5 662 aa27.67■■■□□ 2.02
VEGFA-232ENST00000640653 HCN4Q9Y3Q4 1203 aa27.67■■■□□ 2.02
VEGFA-232ENST00000640653 SYT1P21579 422 aa27.66■■■□□ 2.02
VEGFA-232ENST00000640653 GRM5P41594 1212 aa27.66■■■□□ 2.02
VEGFA-232ENST00000640653 NAB2Q15742 525 aa27.66■■■□□ 2.02
VEGFA-232ENST00000640653 TMC5Q6UXY8 1006 aa27.66■■■□□ 2.02
VEGFA-232ENST00000640653 EDAQ92838 391 aa27.66■■■□□ 2.02
VEGFA-232ENST00000640653 TCHPQ9BT92 498 aa27.66■■■□□ 2.02
VEGFA-232ENST00000640653 PTPRHQ9HD43 1115 aa27.66■■■□□ 2.02
VEGFA-232ENST00000640653 LARSQ9P2J5 1176 aaKnown RBP27.66■■■□□ 2.02
VEGFA-232ENST00000640653 H0YCG3 227 aa27.65■■■□□ 2.02
VEGFA-232ENST00000640653 K7ELQ4 463 aaPredicted RBP27.65■■■□□ 2.02
VEGFA-232ENST00000640653 GLUD1P00367 558 aa27.65■■■□□ 2.02
VEGFA-232ENST00000640653 WEE2P0C1S8 567 aa27.65■■■□□ 2.02
VEGFA-232ENST00000640653 SP100P23497 879 aaPredicted RBP27.65■■■□□ 2.02
VEGFA-232ENST00000640653 KANK3Q6NY19 840 aa27.65■■■□□ 2.02
VEGFA-232ENST00000640653 MPZL3Q6UWV2 235 aa27.65■■■□□ 2.02
VEGFA-232ENST00000640653 TMEM161BQ8NDZ6 487 aa27.65■■■□□ 2.02
VEGFA-232ENST00000640653 RIN2Q8WYP3 895 aaPredicted RBP27.65■■■□□ 2.02
VEGFA-232ENST00000640653 B3GALT6Q96L58 329 aa27.65■■■□□ 2.02
VEGFA-232ENST00000640653 CXCL16Q9H2A7 254 aa27.65■■■□□ 2.02
VEGFA-232ENST00000640653 MAN1C1Q9NR34 630 aa27.65■■■□□ 2.02
VEGFA-232ENST00000640653 FNIP2Q9P278 1114 aa27.65■■■□□ 2.02
VEGFA-232ENST00000640653 ODF2LQ9ULJ1 636 aa27.65■■■□□ 2.02
VEGFA-232ENST00000640653 KIF4AO95239 1232 aa27.64■■■□□ 2.02
VEGFA-232ENST00000640653 C1RP00736 705 aa27.64■■■□□ 2.02
VEGFA-232ENST00000640653 MCF2P10911 925 aa27.64■■■□□ 2.02
VEGFA-232ENST00000640653 PROZP22891 400 aa27.64■■■□□ 2.02
VEGFA-232ENST00000640653 GRIN1Q05586 938 aa27.64■■■□□ 2.02
VEGFA-232ENST00000640653 ELAVL2Q12926 359 aaKnown RBP27.64■■■□□ 2.02
VEGFA-232ENST00000640653 ARSHQ5FYA8 562 aa27.64■■■□□ 2.02
VEGFA-232ENST00000640653 GPR149Q86SP6 731 aa27.64■■■□□ 2.02
VEGFA-232ENST00000640653 ZBTB33Q86T24 672 aa27.64■■■□□ 2.02
VEGFA-232ENST00000640653 GPBP1Q86WP2 473 aa27.64■■■□□ 2.02
VEGFA-232ENST00000640653 HASPINQ8TF76 798 aa27.64■■■□□ 2.02
VEGFA-232ENST00000640653 PPP1R10Q96QC0 940 aaKnown RBP27.64■■■□□ 2.02
VEGFA-232ENST00000640653 NPHP3-ACAD11A0A0J9YXS1 232 aa27.63■■■□□ 2.01
VEGFA-232ENST00000640653 MAPTP10636 758 aaKnown RBP27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms