RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 HVCN1Q96D96 273 aa15.33■□□□□ 0.04
SCARB2-216ENST00000639300 DEFB129Q9H1M3 183 aa15.33■□□□□ 0.04
SCARB2-216ENST00000639300 ASNSD1Q9NWL6 643 aa15.33■□□□□ 0.04
SCARB2-216ENST00000639300 SHMT1P34896 483 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 PEX19P40855 299 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 BCAR1P56945 870 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 TMPRSS15P98073 1019 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 ARMCX2Q7L311 632 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 SNF8Q96H20 258 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 INTS13Q9NVM9 706 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 PHF20L1A8MW92 1017 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 MAPK13O15264 365 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 SLC4A1P02730 911 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 CDH6P55285 790 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 ACTN3Q08043 901 aaPredicted RBP15.32■□□□□ 0.04
SCARB2-216ENST00000639300 TRIM72Q6ZMU5 477 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 TPCN2Q8NHX9 752 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 SYN2Q92777 582 aaPredicted RBP15.32■□□□□ 0.04
SCARB2-216ENST00000639300 MTMR8Q96EF0 704 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 KLC2Q9H0B6 622 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 KCND2Q9NZV8 630 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 UVRAGQ9P2Y5 699 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 TLK1Q9UKI8 766 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 EIF3DO15371 548 aaKnown RBP eCLIP15.32■□□□□ 0.04
SCARB2-216ENST00000639300 HLA-DRAP01903 254 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 ARPP19P56211 112 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 CAV1Q03135 178 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 ANGEL2Q5VTE6 544 aaKnown RBP15.32■□□□□ 0.04
SCARB2-216ENST00000639300 DSTYKQ6XUX3 929 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 PTF1AQ7RTS3 328 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 CBWD2Q8IUF1 395 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.32■□□□□ 0.04
SCARB2-216ENST00000639300 ZNF526Q8TF50 670 aaPredicted RBP15.32■□□□□ 0.04
SCARB2-216ENST00000639300 CCDC68Q9H2F9 335 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 TXLNGQ9NUQ3 528 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 PARVAQ9NVD7 372 aa15.32■□□□□ 0.04
SCARB2-216ENST00000639300 COPEO14579 308 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 KRT7P08729 469 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 TXNP10599 105 aaKnown RBP15.31■□□□□ 0.04
SCARB2-216ENST00000639300 KRT3P12035 628 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 ANXA13P27216 316 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 SREBF1P36956 1147 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 BYSLQ13895 437 aaKnown RBP15.31■□□□□ 0.04
SCARB2-216ENST00000639300 TTLL4Q14679 1199 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 SEZ6Q53EL9 994 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 SRLQ86TD4 932 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 WNT7AO00755 349 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 PRPSAP1Q14558 356 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 KYNUQ16719 465 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 LONRF1Q17RB8 773 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 PAPD7Q5XG87 772 aaKnown RBP15.31■□□□□ 0.04
SCARB2-216ENST00000639300 TWF2Q6IBS0 349 aaKnown RBP15.31■□□□□ 0.04
SCARB2-216ENST00000639300 LRP10Q7Z4F1 713 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 APOBEC3FQ8IUX4 373 aaKnown RBP15.31■□□□□ 0.04
SCARB2-216ENST00000639300 ANKMY2Q8IV38 441 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 TRIM42Q8IWZ5 723 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 RBBP8NLQ8NC74 664 aaPredicted RBP15.31■□□□□ 0.04
SCARB2-216ENST00000639300 NUF2Q9BZD4 464 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 ALG13Q9NP73 1137 aaKnown RBP15.31■□□□□ 0.04
SCARB2-216ENST00000639300 PRKCBP05771 671 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 RNASELQ05823 741 aaKnown RBP15.31■□□□□ 0.04
SCARB2-216ENST00000639300 RSPH3Q86UC2 560 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 GLIS3Q8NEA6 775 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 DEPDC1BQ8WUY9 529 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 TOPORSQ9NS56 1045 aaPredicted RBP15.31■□□□□ 0.04
SCARB2-216ENST00000639300 BLOC1S4Q9NUP1 217 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 GOLGA8RI6L899 631 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 IL1R1P14778 569 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 C1orf228Q6PIY5 440 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 SH3RF1Q7Z6J0 888 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 ZFPM1Q8IX07 1006 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 TGS1Q96RS0 853 aaKnown RBP15.31■□□□□ 0.04
SCARB2-216ENST00000639300 ERP44Q9BS26 406 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 C2orf40Q9H1Z8 148 aa15.31■□□□□ 0.04
SCARB2-216ENST00000639300 PPARGC1AQ9UBK2 798 aaKnown RBP15.31■□□□□ 0.04
SCARB2-216ENST00000639300 EIF3HO15372 352 aaKnown RBP eCLIP15.3■□□□□ 0.04
SCARB2-216ENST00000639300 WEE2P0C1S8 567 aa15.3■□□□□ 0.04
SCARB2-216ENST00000639300 LSP1P33241 339 aa15.3■□□□□ 0.04
SCARB2-216ENST00000639300 ZNF571Q7Z3V5 609 aaPredicted RBP15.3■□□□□ 0.04
SCARB2-216ENST00000639300 OSGEPQ9NPF4 335 aa15.3■□□□□ 0.04
SCARB2-216ENST00000639300 PCDHB2Q9Y5E7 798 aa15.3■□□□□ 0.04
SCARB2-216ENST00000639300 C4orf50Q6ZRC1 276 aa15.3■□□□□ 0.04
SCARB2-216ENST00000639300 LRRC71Q8N4P6 559 aa15.3■□□□□ 0.04
SCARB2-216ENST00000639300 BTBD6Q96KE9 485 aa15.3■□□□□ 0.04
SCARB2-216ENST00000639300 MOV10L1Q9BXT6 1211 aaKnown RBP15.3■□□□□ 0.04
SCARB2-216ENST00000639300 DHX35Q9H5Z1 703 aaKnown RBP15.3■□□□□ 0.04
SCARB2-216ENST00000639300 RIMS1Q86UR5 1692 aaKnown RBP15.3■□□□□ 0.04
SCARB2-216ENST00000639300 H3BQF6 201 aa15.3■□□□□ 0.04
SCARB2-216ENST00000639300 PHF2O75151 1096 aa15.3■□□□□ 0.04
SCARB2-216ENST00000639300 NCF2P19878 526 aaPredicted RBP15.3■□□□□ 0.04
SCARB2-216ENST00000639300 GCKP35557 465 aa15.3■□□□□ 0.04
SCARB2-216ENST00000639300 MMEL1Q495T6 779 aa15.3■□□□□ 0.04
SCARB2-216ENST00000639300 WDR93Q6P2C0 686 aa15.3■□□□□ 0.04
SCARB2-216ENST00000639300 ABI1Q8IZP0 508 aa15.3■□□□□ 0.04
SCARB2-216ENST00000639300 SEPT1Q8WYJ6 367 aa15.3■□□□□ 0.04
SCARB2-216ENST00000639300 ARL8AQ96BM9 186 aa15.3■□□□□ 0.04
SCARB2-216ENST00000639300 C18orf8Q96DM3 657 aa15.3■□□□□ 0.04
SCARB2-216ENST00000639300 ANKZF1Q9H8Y5 726 aa15.3■□□□□ 0.04
SCARB2-216ENST00000639300 KCNQ5Q9NR82 932 aa15.3■□□□□ 0.04
SCARB2-216ENST00000639300 PNMA3Q9UL41 463 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms