RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 GSTT2BP0CG30 244 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 BRAFP15056 766 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 KCNA2P16389 499 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 SKIV2L2P42285 1042 aaKnown RBP7.58□□□□□ -1.2
NECAP1-213ENST00000638883 CD97P48960 835 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 THOC5Q13769 683 aaKnown RBP7.58□□□□□ -1.2
NECAP1-213ENST00000638883 DESI1Q6ICB0 168 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 TMC3Q7Z5M5 1100 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 SEPT12Q8IYM1 358 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 GRAMD1AQ96CP6 724 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 DGCR14Q96DF8 476 aaKnown RBP7.58□□□□□ -1.2
NECAP1-213ENST00000638883 CEP63Q96MT8 703 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 POLR3CQ9BUI4 534 aaPredicted RBP7.58□□□□□ -1.2
NECAP1-213ENST00000638883 MYLK2Q9H1R3 596 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 TBK1Q9UHD2 729 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 SAP30BPQ9UHR5 308 aaKnown RBP7.58□□□□□ -1.2
NECAP1-213ENST00000638883 GDAQ9Y2T3 454 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 BAZ2AQ9UIF9 1905 aaKnown RBP7.58□□□□□ -1.2
NECAP1-213ENST00000638883 ABCC12Q96J65 1359 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 RANBP6O60518 1105 aaKnown RBP7.58□□□□□ -1.2
NECAP1-213ENST00000638883 CBFA2T3O75081 653 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 CBX6O95503 412 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 APOEP02649 317 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 AFPP02771 609 aaKnown RBP7.58□□□□□ -1.2
NECAP1-213ENST00000638883 PORP16435 677 aaPredicted RBP7.58□□□□□ -1.2
NECAP1-213ENST00000638883 OCRLQ01968 901 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 STRN3Q13033 797 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 MMEL1Q495T6 779 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 KHDC1Q4VXA5 237 aaKnown RBP7.58□□□□□ -1.2
NECAP1-213ENST00000638883 SLC35B4Q969S0 331 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 FAM161BQ96MY7 647 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 KIAA1683Q9H0B3 1180 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 CNGB3Q9NQW8 809 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 TBC1D23Q9NUY8 699 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 TMOD2Q9NZR1 351 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 SNX24Q9Y343 169 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 HBS1LQ9Y450 684 aaKnown RBP7.58□□□□□ -1.2
NECAP1-213ENST00000638883 PCDHB6Q9Y5E3 794 aa7.58□□□□□ -1.2
NECAP1-213ENST00000638883 SALL1Q9NSC2 1324 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 ZSWIM8A7E2V4 1837 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 FAM196BA6NMK8 535 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 SFI1A8K8P3 1242 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 UBE2Q2LH0YL09 131 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 CCDC188H7C350 402 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 TRPA1O75762 1119 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 ESRRAP11474 423 aaPredicted RBP7.57□□□□□ -1.2
NECAP1-213ENST00000638883 FLT3P36888 993 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 SLC1A4P43007 532 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 KLK7P49862 253 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 CALCOCO2Q13137 446 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 ZNF394Q53GI3 561 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 KLHDC7AQ5VTJ3 777 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 TMEM214Q6NUQ4 689 aaKnown RBP7.57□□□□□ -1.2
NECAP1-213ENST00000638883 APTXQ7Z2E3 356 aaKnown RBP7.57□□□□□ -1.2
NECAP1-213ENST00000638883 SLC15A3Q8IY34 581 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 SCAIQ8N9R8 606 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 U2AF1L4Q8WU68 220 aaKnown RBP7.57□□□□□ -1.2
NECAP1-213ENST00000638883 CCDC77Q9BR77 488 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 CELF4Q9BZC1 486 aaKnown RBP7.57□□□□□ -1.2
NECAP1-213ENST00000638883 TMOD3Q9NYL9 352 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 EFR3BQ9Y2G0 817 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 FADS3Q9Y5Q0 445 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 GPC6Q9Y625 555 aaPredicted RBP7.57□□□□□ -1.2
NECAP1-213ENST00000638883 CFAP69A5D8W1 941 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 MATN2O00339 956 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 STRNO43815 780 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 CCDC22O60826 627 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 CLPTM1O96005 669 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 IDO1P14902 403 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 MMP13P45452 471 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 POLGP54098 1239 aaPredicted RBP7.57□□□□□ -1.2
NECAP1-213ENST00000638883 RAPGEF1Q13905 1077 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 NR6A1Q15406 480 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 ZNF174Q15697 407 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 NT5DC1Q5TFE4 455 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 SLC2A7Q6PXP3 512 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 RBM44Q6ZP01 1051 aaKnown RBP7.57□□□□□ -1.2
NECAP1-213ENST00000638883 SDR16C5Q8N3Y7 309 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 MYL10Q9BUA6 226 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 TMEM60Q9H2L4 133 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 TRPC7Q9HCX4 862 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 KCNMB3Q9NPA1 279 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 HEY1Q9Y5J3 304 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 SRPRBQ9Y5M8 271 aaKnown RBP7.57□□□□□ -1.2
NECAP1-213ENST00000638883 ZNF236Q9UL36 1845 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 XPOTO43592 962 aaKnown RBP7.57□□□□□ -1.2
NECAP1-213ENST00000638883 CETN2P41208 172 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 ARFIP2P53365 341 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 AP2B1P63010 937 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 PHEXP78562 749 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 PLOD1Q02809 727 aaPredicted RBP7.57□□□□□ -1.2
NECAP1-213ENST00000638883 PDCD4Q53EL6 469 aaKnown RBP7.57□□□□□ -1.2
NECAP1-213ENST00000638883 CMPK2Q5EBM0 449 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 TMEM67Q5HYA8 995 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 TRAF7Q6Q0C0 670 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 CCDC84Q86UT8 332 aaPredicted RBP7.57□□□□□ -1.2
NECAP1-213ENST00000638883 SATL1Q86VE3 508 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 SAMD3Q8N6K7 520 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 INPP5DQ92835 1189 aa7.57□□□□□ -1.2
NECAP1-213ENST00000638883 CLIP3Q96DZ5 547 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms