RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 HIST1H2AHQ96KK5 128 aa20.35■□□□□ 0.85
CACNA1A-257ENST00000638009 CCDC17Q96LX7 622 aa20.35■□□□□ 0.85
CACNA1A-257ENST00000638009 HIST1H2AJQ99878 128 aa20.35■□□□□ 0.85
CACNA1A-257ENST00000638009 H2AFJQ9BTM1 129 aa20.35■□□□□ 0.85
CACNA1A-257ENST00000638009 MFSD14BQ5SR56 506 aa20.35■□□□□ 0.85
CACNA1A-257ENST00000638009 ZBTB38Q8NAP3 1195 aaPredicted RBP20.35■□□□□ 0.85
CACNA1A-257ENST00000638009 IP6K2Q9UHH9 426 aa20.35■□□□□ 0.85
CACNA1A-257ENST00000638009 PALD1Q9ULE6 856 aa20.35■□□□□ 0.85
CACNA1A-257ENST00000638009 MTO1Q9Y2Z2 717 aaKnown RBP20.35■□□□□ 0.85
CACNA1A-257ENST00000638009 FYNP06241 537 aa20.35■□□□□ 0.85
CACNA1A-257ENST00000638009 ENOSF1Q7L5Y1 443 aa20.35■□□□□ 0.85
CACNA1A-257ENST00000638009 CDKL3Q8IVW4 592 aaPredicted RBP20.35■□□□□ 0.85
CACNA1A-257ENST00000638009 RIBC1Q8N443 379 aaPredicted RBP20.35■□□□□ 0.85
CACNA1A-257ENST00000638009 CNDP1Q96KN2 507 aa20.35■□□□□ 0.85
CACNA1A-257ENST00000638009 KPNA4O00629 521 aaPredicted RBP20.35■□□□□ 0.85
CACNA1A-257ENST00000638009 GNPATO15228 680 aa20.35■□□□□ 0.85
CACNA1A-257ENST00000638009 EIF3HO15372 352 aaKnown RBP eCLIP20.35■□□□□ 0.85
CACNA1A-257ENST00000638009 KBTBD12Q3ZCT8 623 aa20.35■□□□□ 0.85
CACNA1A-257ENST00000638009 MAGEA10P43363 369 aaPredicted RBP20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 HSD17B4P51659 736 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 OR6P1Q8NGX9 317 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 MAGED4Q96JG8 741 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 TMEM63CQ9P1W3 806 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 FAM187AA6NFU0 413 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 SPAG6O75602 509 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 RXRGP48443 463 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 VAV3Q9UKW4 847 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 TCP10Q12799 353 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 NGRNQ9NPE2 291 aaKnown RBP20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 FKBP9O95302 570 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 ALAS1P13196 640 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 FKBP9P1Q75LS8 142 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 ZNF496Q96IT1 587 aaPredicted RBP20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 CXorf56Q9H5V9 222 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 H3BMM5 538 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 S100GP29377 79 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 TRIM65Q6PJ69 517 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 VPS33AQ96AX1 596 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 C17orf80Q9BSJ5 609 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 ARHGEF11O15085 1522 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 CCDC195A0A1B0GUA6 201 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 K7ERI5 159 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 FCGR1AP12314 374 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 ARMC4Q5T2S8 1044 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 URGCPQ8TCY9 931 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 CEP44Q9C0F1 390 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 DYRK3O43781 588 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 MFN2O95140 757 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 ATP6V1C1P21283 382 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 GGCXP38435 758 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 HNRNPH2P55795 449 aaKnown RBP20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 GPC5P78333 572 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 PUDPQ08623 228 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 UBE2OQ9C0C9 1292 aaKnown RBP20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 HEY1Q9Y5J3 304 aa20.34■□□□□ 0.85
CACNA1A-257ENST00000638009 MEFVO15553 781 aaPredicted RBP20.33■□□□□ 0.85
CACNA1A-257ENST00000638009 USP1O94782 785 aa20.33■□□□□ 0.85
CACNA1A-257ENST00000638009 RPL19P84098 196 aaKnown RBP20.33■□□□□ 0.85
CACNA1A-257ENST00000638009 CCDC60Q8IWA6 550 aaPredicted RBP20.33■□□□□ 0.85
CACNA1A-257ENST00000638009 ZWILCHQ9H900 591 aa20.33■□□□□ 0.85
CACNA1A-257ENST00000638009 EIF4A3P38919 411 aaKnown RBP20.33■□□□□ 0.85
CACNA1A-257ENST00000638009 TSC22D1Q15714 1073 aa20.33■□□□□ 0.85
CACNA1A-257ENST00000638009 NUP93Q8N1F7 819 aa20.33■□□□□ 0.85
CACNA1A-257ENST00000638009 DNAJC9Q8WXX5 260 aa20.33■□□□□ 0.85
CACNA1A-257ENST00000638009 KRT35Q92764 455 aa20.33■□□□□ 0.85
CACNA1A-257ENST00000638009 MOSPD1Q9UJG1 213 aa20.33■□□□□ 0.85
CACNA1A-257ENST00000638009 SPACA6W5XKT8 324 aa20.33■□□□□ 0.85
CACNA1A-257ENST00000638009 ECM2O94769 699 aaPredicted RBP20.33■□□□□ 0.85
CACNA1A-257ENST00000638009 RAB2AP61019 212 aa20.33■□□□□ 0.85
CACNA1A-257ENST00000638009 PPIDQ08752 370 aaKnown RBP20.33■□□□□ 0.85
CACNA1A-257ENST00000638009 GLMNQ92990 594 aa20.33■□□□□ 0.85
CACNA1A-257ENST00000638009 APOL6Q9BWW8 343 aa20.33■□□□□ 0.85
CACNA1A-257ENST00000638009 ANO9A1A5B4 782 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 PSAPP07602 524 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 TMEM154Q6P9G4 183 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 TMEM35BQ8NCS4 154 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 KCNV2Q8TDN2 545 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 ZNF408Q9H9D4 720 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 JAG2Q9Y219 1238 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 ZHX2Q9Y6X8 837 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 ARAP1Q96P48 1450 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 CYP2C19P33261 490 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 STAT5AP42229 794 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 BCAP31P51572 246 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 STAT5BP51692 787 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 NFRKBQ6P4R8 1299 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 SFR1Q86XK3 245 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 FAM47E-STBD1D6RA91 191 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 TAF4O00268 1085 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 LCA5LO95447 670 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 NXF1Q9UBU9 619 aaKnown RBP20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 PCDHA4Q9UN74 947 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 INPP5FQ9Y2H2 1132 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 SPANXN2Q5MJ10 180 aa20.33■□□□□ 0.84
CACNA1A-257ENST00000638009 ACEP12821 1306 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 SEC31AO94979 1220 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 MARK3P27448 753 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 RCN1Q15293 331 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 ADAM22Q9P0K1 906 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 PDAP1Q13442 181 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms