RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 PIEZO1Q92508 2521 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 MYO15AQ9UKN7 3530 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 KMT2EQ8IZD2 1858 aa8.66□□□□□ -1.02
PNKP-229ENST00000637897 CACNA1AO00555 2505 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 MTCL1Q9Y4B5 1905 aaKnown RBP8.65□□□□□ -1.02
PNKP-229ENST00000637897 NPHP3-ACAD11A0A0J9YXS1 232 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 ARHGEF35A5YM69 484 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 SFI1A8K8P3 1242 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 C2CD2LO14523 706 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 HIP1RO75146 1068 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 RFPL2O75678 378 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 KIF4AO95239 1232 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 PRKCBP05771 671 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 ASGR2P07307 311 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 RPL17P18621 184 aaKnown RBP8.65□□□□□ -1.02
PNKP-229ENST00000637897 PDCP20941 246 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 PROZP22891 400 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 PRPHP41219 470 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 NPTX2P47972 431 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 SLC12A3P55017 1021 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 TMEM119Q4V9L6 283 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 XKR4Q5GH76 650 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 KIAA1841Q6NSI8 718 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 FUT10Q6P4F1 479 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 ALKAL1Q6UXT8 129 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 TMC5Q6UXY8 1006 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 TRIM67Q6ZTA4 783 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 GPR149Q86SP6 731 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 URGCPQ8TCY9 931 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 ZNF707Q96C28 371 aaPredicted RBP8.65□□□□□ -1.02
PNKP-229ENST00000637897 ZBTB45Q96K62 511 aaPredicted RBP8.65□□□□□ -1.02
PNKP-229ENST00000637897 PRIMPOLQ96LW4 560 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 FBXL18Q96ME1 805 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 ZMAT2Q96NC0 199 aaKnown RBP8.65□□□□□ -1.02
PNKP-229ENST00000637897 PPP1R10Q96QC0 940 aaKnown RBP8.65□□□□□ -1.02
PNKP-229ENST00000637897 FIZ1Q96SL8 496 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 PHOX2BQ99453 314 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 PLIN2Q99541 437 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 POP1Q99575 1024 aaKnown RBP8.65□□□□□ -1.02
PNKP-229ENST00000637897 BLOC1S4Q9NUP1 217 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 PRMT7Q9NVM4 692 aaPredicted RBP8.65□□□□□ -1.02
PNKP-229ENST00000637897 KANSL3Q9P2N6 904 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 ZDHHC9Q9Y397 364 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 ATP6V1DQ9Y5K8 247 aa8.65□□□□□ -1.02
PNKP-229ENST00000637897 ZMYM2Q9UBW7 1377 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 TMEM221A6NGB7 291 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 CASTOR2A6NHX0 329 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 M0R296 226 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 NRG2O14511 850 aaPredicted RBP8.64□□□□□ -1.03
PNKP-229ENST00000637897 SPATA31D3P0C874 917 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 VCPP55072 806 aaKnown RBP8.64□□□□□ -1.03
PNKP-229ENST00000637897 PEX3P56589 373 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 GRIK3Q13003 919 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 PRPF4BQ13523 1007 aaKnown RBP8.64□□□□□ -1.03
PNKP-229ENST00000637897 PKP1Q13835 747 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 PTPN21Q16825 1174 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 GLRA4Q5JXX5 417 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 MCTP1Q6DN14 999 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 FAM173BQ6P4H8 233 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 PRSS55Q6UWB4 352 aaPredicted RBP8.64□□□□□ -1.03
PNKP-229ENST00000637897 SPATA31D4Q6ZUB0 917 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 USP49Q70CQ1 688 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 BMP8AQ7Z5Y6 402 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 PRSS33Q8NF86 280 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 LNX1Q8TBB1 728 aaPredicted RBP8.64□□□□□ -1.03
PNKP-229ENST00000637897 HASPINQ8TF76 798 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 ACO2Q99798 780 aaKnown RBP8.64□□□□□ -1.03
PNKP-229ENST00000637897 CLSTN3Q9BQT9 956 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 TARS2Q9BW92 718 aaKnown RBP8.64□□□□□ -1.03
PNKP-229ENST00000637897 CDT1Q9H211 546 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 GOLGA2P5Q9HBQ8 144 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 UBN1Q9NPG3 1134 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 PARP2Q9UGN5 583 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 ADAM28Q9UKQ2 775 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 ARIH1Q9Y4X5 557 aaPredicted RBP8.64□□□□□ -1.03
PNKP-229ENST00000637897 TCHHQ07283 1943 aa8.64□□□□□ -1.03
PNKP-229ENST00000637897 TGM5O43548 720 aa8.63□□□□□ -1.03
PNKP-229ENST00000637897 STX6O43752 255 aa8.63□□□□□ -1.03
PNKP-229ENST00000637897 FAM189A1O60320 539 aa8.63□□□□□ -1.03
PNKP-229ENST00000637897 ZSCAN22P10073 491 aaPredicted RBP8.63□□□□□ -1.03
PNKP-229ENST00000637897 LIG1P18858 919 aa8.63□□□□□ -1.03
PNKP-229ENST00000637897 CA8P35219 290 aa8.63□□□□□ -1.03
PNKP-229ENST00000637897 GLUD2P49448 558 aa8.63□□□□□ -1.03
PNKP-229ENST00000637897 CACNB1Q02641 598 aaPredicted RBP8.63□□□□□ -1.03
PNKP-229ENST00000637897 ITIH3Q06033 890 aa8.63□□□□□ -1.03
PNKP-229ENST00000637897 RAD51AP2Q09MP3 1159 aa8.63□□□□□ -1.03
PNKP-229ENST00000637897 TUSC3Q13454 348 aa8.63□□□□□ -1.03
PNKP-229ENST00000637897 GIT2Q14161 759 aa8.63□□□□□ -1.03
PNKP-229ENST00000637897 PTPAQ15257 358 aa8.63□□□□□ -1.03
PNKP-229ENST00000637897 MAPK6Q16659 721 aa8.63□□□□□ -1.03
PNKP-229ENST00000637897 ATF7IP2Q5U623 682 aa8.63□□□□□ -1.03
PNKP-229ENST00000637897 HAUS3Q68CZ6 603 aa8.63□□□□□ -1.03
PNKP-229ENST00000637897 SYT2Q8N9I0 419 aaPredicted RBP8.63□□□□□ -1.03
PNKP-229ENST00000637897 TMEM161BQ8NDZ6 487 aa8.63□□□□□ -1.03
PNKP-229ENST00000637897 ERMNQ8TAM6 284 aa8.63□□□□□ -1.03
PNKP-229ENST00000637897 NTPCRQ9BSD7 190 aaKnown RBP8.63□□□□□ -1.03
PNKP-229ENST00000637897 IKZF4Q9H2S9 585 aa8.63□□□□□ -1.03
PNKP-229ENST00000637897 MAN1C1Q9NR34 630 aa8.63□□□□□ -1.03
PNKP-229ENST00000637897 MRPL17Q9NRX2 175 aaKnown RBP8.63□□□□□ -1.03
PNKP-229ENST00000637897 LIMD1Q9UGP4 676 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms