RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 DAXXQ9UER7 740 aaPredicted RBP19.79■□□□□ 0.76
CIITA-215ENST00000637439 USO1O60763 962 aaKnown RBP19.78■□□□□ 0.76
CIITA-215ENST00000637439 DTNBO60941 627 aa19.78■□□□□ 0.76
CIITA-215ENST00000637439 ZMYND10O75800 440 aa19.78■□□□□ 0.76
CIITA-215ENST00000637439 LAMP2P13473 410 aa19.78■□□□□ 0.76
CIITA-215ENST00000637439 TUSC3Q13454 348 aa19.78■□□□□ 0.76
CIITA-215ENST00000637439 CDR2LQ86X02 465 aaPredicted RBP19.78■□□□□ 0.76
CIITA-215ENST00000637439 GLYCTKQ8IVS8 523 aa19.78■□□□□ 0.76
CIITA-215ENST00000637439 DIS3L2Q8IYB7 885 aaKnown RBP19.78■□□□□ 0.76
CIITA-215ENST00000637439 C2orf40Q9H1Z8 148 aa19.78■□□□□ 0.76
CIITA-215ENST00000637439 TUFT1Q9NNX1 390 aa19.78■□□□□ 0.76
CIITA-215ENST00000637439 FAM186AA6NE01 2351 aa19.78■□□□□ 0.76
CIITA-215ENST00000637439 KRBA1A5PL33 1030 aa19.77■□□□□ 0.76
CIITA-215ENST00000637439 BTBD18B2RXH4 712 aa19.77■□□□□ 0.76
CIITA-215ENST00000637439 N4BP3O15049 544 aa19.77■□□□□ 0.76
CIITA-215ENST00000637439 FAM187BQ17R55 369 aa19.77■□□□□ 0.76
CIITA-215ENST00000637439 CDCA2Q69YH5 1023 aaPredicted RBP19.77■□□□□ 0.76
CIITA-215ENST00000637439 PDXDC1Q6P996 788 aa19.77■□□□□ 0.76
CIITA-215ENST00000637439 GET4Q7L5D6 327 aaPredicted RBP19.77■□□□□ 0.76
CIITA-215ENST00000637439 GTF3C6Q969F1 213 aa19.77■□□□□ 0.76
CIITA-215ENST00000637439 SEMA4AQ9H3S1 761 aa19.77■□□□□ 0.76
CIITA-215ENST00000637439 FZD8Q9H461 694 aa19.77■□□□□ 0.76
CIITA-215ENST00000637439 DOCK8Q8NF50 2099 aa19.77■□□□□ 0.75
CIITA-215ENST00000637439 SPTBN4Q9H254 2564 aa19.77■□□□□ 0.75
CIITA-215ENST00000637439 ANHXE9PGG2 379 aa19.76■□□□□ 0.75
CIITA-215ENST00000637439 HNRNPA1P09651 372 aaKnown RBP eCLIP19.76■□□□□ 0.75
CIITA-215ENST00000637439 RPL17P18621 184 aaKnown RBP19.76■□□□□ 0.75
CIITA-215ENST00000637439 ATP2B1P20020 1258 aa19.76■□□□□ 0.75
CIITA-215ENST00000637439 ELAVL2Q12926 359 aaKnown RBP19.76■□□□□ 0.75
CIITA-215ENST00000637439 TMEM132AQ24JP5 1023 aa19.76■□□□□ 0.75
CIITA-215ENST00000637439 PHLDB3Q6NSJ2 640 aa19.76■□□□□ 0.75
CIITA-215ENST00000637439 MAEAQ7L5Y9 396 aa19.76■□□□□ 0.75
CIITA-215ENST00000637439 ADSSL1Q8N142 457 aa19.76■□□□□ 0.75
CIITA-215ENST00000637439 NECAB1Q8N987 351 aa19.76■□□□□ 0.75
CIITA-215ENST00000637439 PIK3R5Q8WYR1 880 aa19.76■□□□□ 0.75
CIITA-215ENST00000637439 NACC1Q96RE7 527 aa19.76■□□□□ 0.75
CIITA-215ENST00000637439 ADPGKQ9BRR6 497 aa19.76■□□□□ 0.75
CIITA-215ENST00000637439 TTPALQ9BTX7 342 aa19.76■□□□□ 0.75
CIITA-215ENST00000637439 TBC1D17Q9HA65 648 aa19.76■□□□□ 0.75
CIITA-215ENST00000637439 CA14Q9ULX7 337 aa19.76■□□□□ 0.75
CIITA-215ENST00000637439 POTEMA6NI47 508 aa19.75■□□□□ 0.75
CIITA-215ENST00000637439 THP07101 528 aa19.75■□□□□ 0.75
CIITA-215ENST00000637439 SPATA31C1P0DKV0 1188 aa19.75■□□□□ 0.75
CIITA-215ENST00000637439 FSHRP23945 695 aa19.75■□□□□ 0.75
CIITA-215ENST00000637439 HTR4Q13639 388 aa19.75■□□□□ 0.75
CIITA-215ENST00000637439 MAPK6Q16659 721 aa19.75■□□□□ 0.75
CIITA-215ENST00000637439 ME3Q16798 604 aa19.75■□□□□ 0.75
CIITA-215ENST00000637439 RTP2Q5QGT7 225 aa19.75■□□□□ 0.75
CIITA-215ENST00000637439 LIN9Q5TKA1 542 aa19.75■□□□□ 0.75
CIITA-215ENST00000637439 PRSS55Q6UWB4 352 aaPredicted RBP19.75■□□□□ 0.75
CIITA-215ENST00000637439 CATSPER3Q86XQ3 398 aa19.75■□□□□ 0.75
CIITA-215ENST00000637439 NSUN7Q8NE18 718 aaKnown RBP19.75■□□□□ 0.75
CIITA-215ENST00000637439 GPR152Q8TDT2 470 aa19.75■□□□□ 0.75
CIITA-215ENST00000637439 RABGGTAQ92696 567 aa19.75■□□□□ 0.75
CIITA-215ENST00000637439 GPRC5CQ9NQ84 441 aa19.75■□□□□ 0.75
CIITA-215ENST00000637439 SLC2A4RGQ9NR83 387 aa19.75■□□□□ 0.75
CIITA-215ENST00000637439 FBXW11Q9UKB1 542 aa19.75■□□□□ 0.75
CIITA-215ENST00000637439 HOXA9P31269 272 aa19.74■□□□□ 0.75
CIITA-215ENST00000637439 PRPF4BQ13523 1007 aaKnown RBP19.74■□□□□ 0.75
CIITA-215ENST00000637439 PSMD5Q16401 504 aa19.74■□□□□ 0.75
CIITA-215ENST00000637439 FAM171A1Q5VUB5 890 aa19.74■□□□□ 0.75
CIITA-215ENST00000637439 CEP57Q86XR8 500 aa19.74■□□□□ 0.75
CIITA-215ENST00000637439 ERMNQ8TAM6 284 aa19.74■□□□□ 0.75
CIITA-215ENST00000637439 PAAF1Q9BRP4 392 aa19.74■□□□□ 0.75
CIITA-215ENST00000637439 POLR3CQ9BUI4 534 aaPredicted RBP19.74■□□□□ 0.75
CIITA-215ENST00000637439 PDZD7Q9H5P4 517 aa19.74■□□□□ 0.75
CIITA-215ENST00000637439 ARHGEF3Q9NR81 526 aa19.74■□□□□ 0.75
CIITA-215ENST00000637439 SIT1Q9Y3P8 196 aa19.74■□□□□ 0.75
CIITA-215ENST00000637439 A0A087WWV3 80 aa19.73■□□□□ 0.75
CIITA-215ENST00000637439 CASTOR2A6NHX0 329 aa19.73■□□□□ 0.75
CIITA-215ENST00000637439 PTGESO14684 152 aa19.73■□□□□ 0.75
CIITA-215ENST00000637439 KIF4AO95239 1232 aa19.73■□□□□ 0.75
CIITA-215ENST00000637439 PPP2R5AQ15172 486 aa19.73■□□□□ 0.75
CIITA-215ENST00000637439 SAFBQ15424 915 aaKnown RBP eCLIP19.73■□□□□ 0.75
CIITA-215ENST00000637439 PPM1LQ5SGD2 360 aa19.73■□□□□ 0.75
CIITA-215ENST00000637439 DCLRE1AQ6PJP8 1040 aa19.73■□□□□ 0.75
CIITA-215ENST00000637439 LNX1Q8TBB1 728 aaPredicted RBP19.73■□□□□ 0.75
CIITA-215ENST00000637439 SHDQ96IW2 340 aa19.73■□□□□ 0.75
CIITA-215ENST00000637439 CLSTN3Q9BQT9 956 aa19.73■□□□□ 0.75
CIITA-215ENST00000637439 SNTG2Q9NY99 539 aa19.73■□□□□ 0.75
CIITA-215ENST00000637439 CDH7Q9ULB5 785 aa19.73■□□□□ 0.75
CIITA-215ENST00000637439 NUMBLQ9Y6R0 609 aa19.73■□□□□ 0.75
CIITA-215ENST00000637439 ACKR2O00590 384 aa19.72■□□□□ 0.75
CIITA-215ENST00000637439 WNT7AO00755 349 aa19.72■□□□□ 0.75
CIITA-215ENST00000637439 XYLBO75191 536 aa19.72■□□□□ 0.75
CIITA-215ENST00000637439 RECQL4O94761 1208 aa19.72■□□□□ 0.75
CIITA-215ENST00000637439 LARGE1O95461 756 aa19.72■□□□□ 0.75
CIITA-215ENST00000637439 PRKCBP05771 671 aa19.72■□□□□ 0.75
CIITA-215ENST00000637439 MCM7P33993 719 aa19.72■□□□□ 0.75
CIITA-215ENST00000637439 NAMPTP43490 491 aa19.72■□□□□ 0.75
CIITA-215ENST00000637439 ORC2Q13416 577 aaPredicted RBP19.72■□□□□ 0.75
CIITA-215ENST00000637439 GRASPQ7Z6J2 395 aaPredicted RBP19.72■□□□□ 0.75
CIITA-215ENST00000637439 DEPTORQ8TB45 409 aa19.72■□□□□ 0.75
CIITA-215ENST00000637439 HASPINQ8TF76 798 aa19.72■□□□□ 0.75
CIITA-215ENST00000637439 TMEM60Q9H2L4 133 aa19.72■□□□□ 0.75
CIITA-215ENST00000637439 CACNG4Q9UBN1 327 aa19.72■□□□□ 0.75
CIITA-215ENST00000637439 ARHGEF35A5YM69 484 aa19.71■□□□□ 0.75
CIITA-215ENST00000637439 MED24O75448 989 aa19.71■□□□□ 0.75
CIITA-215ENST00000637439 LMNAP02545 664 aaKnown RBP19.71■□□□□ 0.75
CIITA-215ENST00000637439 C8AP07357 584 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms